RNA–Protein interactions for RNA: ENST00000554768.5

MTHFD1-209, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-209ENST00000554768 TSPAN3O60637 253 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 RNF40O75150 1001 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 GYPCP04921 128 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 CHRM1P11229 460 aaPredicted RBP13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 SKILP12757 684 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 TNFAIP3P21580 790 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 GBP1P32455 592 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 FLT3P36888 993 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 TNFRSF4P43489 277 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 CXCL12P48061 93 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 ZBED6P86452 979 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 MPPE1Q53F39 396 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 OTUD1Q5VV17 481 aaPredicted RBP13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 NADSYN1Q6IA69 706 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 ACAD10Q6JQN1 1059 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 TRNP1Q6NT89 227 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 PKN3Q6P5Z2 889 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 PHLDB2Q86SQ0 1253 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 TMA16Q96EY4 203 aaKnown RBP13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 C11orf70Q9BRQ4 267 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 ADAM33Q9BZ11 813 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 IRX2Q9BZI1 471 aaPredicted RBP13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 NUCKS1Q9H1E3 243 aaKnown RBP13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 FAM204AQ9H8W3 233 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 SEPT11Q9NVA2 429 aaKnown RBP13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 DNAJC17Q9NVM6 304 aaKnown RBP13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 DDIT4Q9NX09 232 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 RRN3Q9NYV6 651 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 CALCOCO1Q9P1Z2 691 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 FBXO4Q9UKT5 387 aa13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 LUC7L2Q9Y383 392 aaKnown RBP13.42□□□□□ -0.26
MTHFD1-209ENST00000554768 TBC1D3BA6NDS4 549 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 M0QYT0 321 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 AP5Z1O43299 807 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 ATG13O75143 517 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 CYBBP04839 570 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 APODP05090 189 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 SLC2A3P11169 496 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 TDGF1P13385 188 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 TFE3P19532 575 aaPredicted RBP13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 SLC6A4P31645 630 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 CCR3P51677 355 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 SATB1Q01826 763 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 CSTF1Q05048 431 aaKnown RBP13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 KDSRQ06136 332 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 C1QBPQ07021 282 aaKnown RBP13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 KLHL30Q0D2K2 578 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 NME3Q13232 169 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 PPP2R5DQ14738 602 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 SLC25A52Q3SY17 297 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 PREPLQ4J6C6 727 aaPredicted RBP13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 PIK3R6Q5UE93 754 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 HGSNATQ68CP4 663 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 SPECC1LQ69YQ0 1117 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 GRAMD4Q6IC98 578 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 RFWD3Q6PCD5 774 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 MON1BQ7L1V2 547 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 CCDC26Q8TAB7 109 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 USP33Q8TEY7 942 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 DDI1Q8WTU0 396 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 PGAP3Q96FM1 320 aaPredicted RBP13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 IRF2BPLQ9H1B7 796 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 RBSNQ9H1K0 784 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 PRMT8Q9NR22 394 aaPredicted RBP13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 TAS2R14Q9NYV8 317 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 XPO7Q9UIA9 1087 aaKnown RBP13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 CLEC4EQ9ULY5 219 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 VPS13AQ96RL7 3174 aa13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 ZFHX2Q9C0A1 2572 aaPredicted RBP13.41□□□□□ -0.26
MTHFD1-209ENST00000554768 SYNJ2BP-COX16A0A087WUM0 186 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 DDX3XO00571 662 aaKnown RBP eCLIP13.4□□□□□ -0.261e-15■■■■□ 20.8
MTHFD1-209ENST00000554768 ENDOD1O94919 500 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 PAPSS2O95340 614 aaPredicted RBP13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 MOCS2O96007 188 aaPredicted RBP13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 F9P00740 461 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 APOEP02649 317 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 CALB1P05937 261 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 SP9P0CG40 484 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 HOXD9P28356 352 aaPredicted RBP13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 CASP14P31944 242 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 CCR1P32246 355 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 KIR2DL1P43626 348 aaPredicted RBP13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 DGKGP49619 791 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 CXCR3P49682 368 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 SGSHP51688 502 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 GSCP56915 257 aaPredicted RBP13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 ZNF528Q3MIS6 628 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 C2orf27AQ580R0 203 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 MPP7Q5T2T1 576 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 EMC10Q5UCC4 262 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 RNF43Q68DV7 783 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 TSSK4Q6SA08 328 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 SARM1Q6SZW1 724 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 BNIPLQ7Z465 357 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 GAS2L3Q86XJ1 694 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 VSTM4Q8IW00 320 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 EMC1Q8N766 993 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 TERB1Q8NA31 727 aa13.4□□□□□ -0.26
MTHFD1-209ENST00000554768 RPLP0P6Q8NHW5 317 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms