RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 TSPAN3O60637 253 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 RNF40O75150 1001 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 GYPCP04921 128 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 CHRM1P11229 460 aaPredicted RBP13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 SKILP12757 684 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 TNFAIP3P21580 790 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 GBP1P32455 592 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 FLT3P36888 993 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 TNFRSF4P43489 277 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 CXCL12P48061 93 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 ZBED6P86452 979 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 MPPE1Q53F39 396 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 OTUD1Q5VV17 481 aaPredicted RBP13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 NADSYN1Q6IA69 706 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 ACAD10Q6JQN1 1059 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 TRNP1Q6NT89 227 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 PKN3Q6P5Z2 889 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 PHLDB2Q86SQ0 1253 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 TMA16Q96EY4 203 aaKnown RBP13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 C11orf70Q9BRQ4 267 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 ADAM33Q9BZ11 813 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 IRX2Q9BZI1 471 aaPredicted RBP13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 NUCKS1Q9H1E3 243 aaKnown RBP13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 FAM204AQ9H8W3 233 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 SEPT11Q9NVA2 429 aaKnown RBP13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 DNAJC17Q9NVM6 304 aaKnown RBP13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 DDIT4Q9NX09 232 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 RRN3Q9NYV6 651 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 CALCOCO1Q9P1Z2 691 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 FBXO4Q9UKT5 387 aa13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 LUC7L2Q9Y383 392 aaKnown RBP13.42□□□□□ -0.26
MTHFD1-208ENST00000554739 TBC1D3BA6NDS4 549 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 M0QYT0 321 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 AP5Z1O43299 807 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 ATG13O75143 517 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 CYBBP04839 570 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 APODP05090 189 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 SLC2A3P11169 496 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 TDGF1P13385 188 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 TFE3P19532 575 aaPredicted RBP13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 SLC6A4P31645 630 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 CCR3P51677 355 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 SATB1Q01826 763 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 CSTF1Q05048 431 aaKnown RBP13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 KDSRQ06136 332 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 C1QBPQ07021 282 aaKnown RBP13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 KLHL30Q0D2K2 578 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 NME3Q13232 169 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 PPP2R5DQ14738 602 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 SLC25A52Q3SY17 297 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 PREPLQ4J6C6 727 aaPredicted RBP13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 PIK3R6Q5UE93 754 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 HGSNATQ68CP4 663 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 SPECC1LQ69YQ0 1117 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 GRAMD4Q6IC98 578 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 RFWD3Q6PCD5 774 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 MON1BQ7L1V2 547 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 CCDC26Q8TAB7 109 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 USP33Q8TEY7 942 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 DDI1Q8WTU0 396 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 PGAP3Q96FM1 320 aaPredicted RBP13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 IRF2BPLQ9H1B7 796 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 RBSNQ9H1K0 784 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 PRMT8Q9NR22 394 aaPredicted RBP13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 TAS2R14Q9NYV8 317 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 XPO7Q9UIA9 1087 aaKnown RBP13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 CLEC4EQ9ULY5 219 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 VPS13AQ96RL7 3174 aa13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 ZFHX2Q9C0A1 2572 aaPredicted RBP13.41□□□□□ -0.26
MTHFD1-208ENST00000554739 SYNJ2BP-COX16A0A087WUM0 186 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 DDX3XO00571 662 aaKnown RBP eCLIP13.4□□□□□ -0.261e-15■■■■□ 20.8
MTHFD1-208ENST00000554739 ENDOD1O94919 500 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 PAPSS2O95340 614 aaPredicted RBP13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 MOCS2O96007 188 aaPredicted RBP13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 F9P00740 461 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 APOEP02649 317 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 CALB1P05937 261 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 SP9P0CG40 484 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 HOXD9P28356 352 aaPredicted RBP13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 CASP14P31944 242 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 CCR1P32246 355 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 KIR2DL1P43626 348 aaPredicted RBP13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 DGKGP49619 791 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 CXCR3P49682 368 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 SGSHP51688 502 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 GSCP56915 257 aaPredicted RBP13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 ZNF528Q3MIS6 628 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 C2orf27AQ580R0 203 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 MPP7Q5T2T1 576 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 EMC10Q5UCC4 262 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 RNF43Q68DV7 783 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 TSSK4Q6SA08 328 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 SARM1Q6SZW1 724 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 BNIPLQ7Z465 357 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 GAS2L3Q86XJ1 694 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 VSTM4Q8IW00 320 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 EMC1Q8N766 993 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 TERB1Q8NA31 727 aa13.4□□□□□ -0.26
MTHFD1-208ENST00000554739 RPLP0P6Q8NHW5 317 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms