RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 HOXB8P17481 243 aaPredicted RBP10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 L1CAMP32004 1257 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 HTR7P34969 479 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 CDKN2BP42772 138 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 EPHA5P54756 1037 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 EIF4EBP2Q13542 120 aaPredicted RBP10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 RAB6CQ53S08 254 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 TCEAL5Q5H9L2 206 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 PRPF38BQ5VTL8 546 aaKnown RBP10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 DCAF12L1Q5VU92 463 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 OTUD1Q5VV17 481 aaPredicted RBP10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 LRRC31Q6UY01 552 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 GRASPQ7Z6J2 395 aaPredicted RBP10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 TMC8Q8IU68 726 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 EFHBQ8N7U6 833 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 SPATA4Q8NEY3 305 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 BTN2A3PQ96KV6 586 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 DDX50Q9BQ39 737 aaKnown RBP10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 DCLK3Q9C098 648 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 SIK2Q9H0K1 926 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 RAB6CQ9H0N0 254 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 SLITRK6Q9H5Y7 841 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 IL21Q9HBE4 155 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 DONSONQ9NYP3 566 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 CALCOCO1Q9P1Z2 691 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 DNMT3BQ9UBC3 853 aaKnown RBP10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 OR12D3Q9UGF7 316 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 FEZ2Q9UHY8 353 aaPredicted RBP10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 PLXNA4Q9HCM2 1894 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 MYH10P35580 1976 aa10.84□□□□□ -0.67
TMEM55B-205ENST00000554028 hCG_1818297A0A087WSY0 165 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 C2orf78A6NCI8 922 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 KCNU1A8MYU2 1149 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 EEF2KO00418 725 aaKnown RBP10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 APOL1O14791 398 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 CREB3O43889 395 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 PAGE1O75459 146 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 OAS1P00973 400 aaKnown RBP10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 AVPR1AP37288 418 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 HCAR3P49019 387 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 TPI1P60174 286 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 CYP4F8P98187 520 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 ITIH3Q06033 890 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 DPYSL3Q14195 570 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 GPR158Q5T848 1215 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 TXNDC8Q6A555 127 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 CES5AQ6NT32 575 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 AADACL2Q6P093 401 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 TMC5Q6UXY8 1006 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 TMEM184AQ6ZMB5 413 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 CYP4V2Q6ZWL3 525 aaPredicted RBP10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 GAREM2Q75VX8 874 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 BZW1Q7L1Q6 419 aaKnown RBP10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 ZNF572Q7Z3I7 529 aaPredicted RBP10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 ADAT2Q7Z6V5 191 aaKnown RBP10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 TMEM150AQ86TG1 271 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 DDX42Q86XP3 938 aaKnown RBP eCLIP10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 ARL14EPQ8N8R7 260 aaPredicted RBP10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 MAB21L3Q8N8X9 362 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 FAM71BQ8TC56 605 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 SLC39A13Q96H72 371 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 FCRL2Q96LA5 508 aaPredicted RBP10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 C1orf74Q96LT6 269 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 RUNDC3BQ96NL0 473 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 RNF157Q96PX1 679 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 KCTD15Q96SI1 283 aaPredicted RBP10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 GAS2L1Q99501 681 aaPredicted RBP10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 LRRC3Q9BY71 257 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 ADAM33Q9BZ11 813 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 FRMD8P1Q9BZ68 369 aaPredicted RBP10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 PRDM12Q9H4Q4 367 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 TASP1Q9H6P5 420 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 CATSPERBQ9H7T0 1116 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 LSM7Q9UK45 103 aaKnown RBP10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 ZNF510Q9Y2H8 683 aa10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 MRPS23Q9Y3D9 190 aaKnown RBP10.83□□□□□ -0.68
TMEM55B-205ENST00000554028 PTPRDP23468 1912 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 C3orf70A6NLC5 250 aaPredicted RBP10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 EFCAB8A8MWE9 144 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 CST8O60676 142 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 TADA3O75528 432 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 KRT10P13645 584 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 IGFBP4P22692 258 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 EPHB2P29323 1055 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 ARSEP51690 589 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 MLLT6P55198 1093 aaPredicted RBP10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 DYNLT1P63172 113 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 SLC7A9P82251 487 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 LMNB2Q03252 620 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 HYAL1Q12794 435 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 LLGL1Q15334 1064 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 TAZQ16635 292 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 CA9Q16790 459 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 ANKRD20A8PQ5CZ79 823 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 RARS2Q5T160 578 aaKnown RBP10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 RWDD4Q6NW29 188 aaKnown RBP10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 EP400NLQ6ZTU2 488 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 BBS12Q6ZW61 710 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 VN1R2Q8NFZ6 395 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 CCDC26Q8TAB7 109 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms