RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ZC3H11AO75152 810 aaKnown RBP eCLIP2.74□□□□□ -1.97
SRP54-204ENST00000553923 USP12O75317 370 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 ZNF432O94892 652 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 RASAL1O95294 804 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 PAPSS2O95340 614 aaPredicted RBP2.74□□□□□ -1.97
SRP54-204ENST00000553923 ACAA1P09110 424 aaPredicted RBP2.74□□□□□ -1.97
SRP54-204ENST00000553923 KITP10721 976 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 ST6GAL1P15907 406 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 EN2P19622 333 aaPredicted RBP2.74□□□□□ -1.97
SRP54-204ENST00000553923 GALNSP34059 522 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 SOX2P48431 317 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 PPM1FP49593 454 aaPredicted RBP2.74□□□□□ -1.97
SRP54-204ENST00000553923 AGFG1P52594 562 aaKnown RBP2.74□□□□□ -1.97
SRP54-204ENST00000553923 PICALMQ13492 652 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 HLTFQ14527 1009 aaKnown RBP eCLIP2.74□□□□□ -1.97
SRP54-204ENST00000553923 ZNF267Q14586 743 aaPredicted RBP2.74□□□□□ -1.97
SRP54-204ENST00000553923 ST3GAL2Q16842 350 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 INSCQ1MX18 579 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 SMTNL2Q2TAL5 461 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 INO80DQ53TQ3 878 aaPredicted RBP2.74□□□□□ -1.97
SRP54-204ENST00000553923 PIK3CD-AS1Q5SR53 167 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 FAM102BQ5T8I3 360 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 CACHD1Q5VU97 1274 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 ANO1Q5XXA6 986 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 GRHL2Q6ISB3 625 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 B3GNT9Q6UX72 402 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 TPH2Q8IWU9 490 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 FAM9BQ8IZU0 186 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 MAGEB6Q8N7X4 407 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 C11orf44Q8N8P7 122 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 NGDNQ8NEJ9 315 aaKnown RBP2.74□□□□□ -1.97
SRP54-204ENST00000553923 SPSB4Q96A44 273 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 PHF21BQ96EK2 531 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 ZNF518BQ9C0D4 1074 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 MAF1Q9H063 256 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 CDH19Q9H159 772 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 RMI1Q9H9A7 625 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 ZMAT3Q9HA38 289 aaKnown RBP2.74□□□□□ -1.97
SRP54-204ENST00000553923 ATP6V0A4Q9HBG4 840 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 A1CFQ9NQ94 594 aaKnown RBP2.74□□□□□ -1.97
SRP54-204ENST00000553923 PLSCR4Q9NRQ2 329 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 TAGLN3Q9UI15 199 aa2.74□□□□□ -1.97
SRP54-204ENST00000553923 A6NNC1 897 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 FAM227AF5H4B4 570 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 LINC01565O15544 149 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 RGS10O43665 173 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 AP1G1O43747 822 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 UGDHO60701 494 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 RHCEP18577 417 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 CD53P19397 219 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 TFEBP19484 476 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 HTR1BP28222 390 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 PTDSS1P48651 473 aaKnown RBP2.73□□□□□ -1.97
SRP54-204ENST00000553923 ENTPD1P49961 510 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 COPAP53621 1224 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 WDR5P61964 334 aaKnown RBP2.73□□□□□ -1.97
SRP54-204ENST00000553923 TXNL4AP83876 142 aaKnown RBP2.73□□□□□ -1.97
SRP54-204ENST00000553923 CCDC15Q0P6D6 951 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 MTA1Q13330 715 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 ARHGAP29Q52LW3 1261 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 COBLL1Q53SF7 1204 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 SLC39A5Q6ZMH5 540 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 TRAPPC11Q7Z392 1133 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 DAAM2Q86T65 1068 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 DGKHQ86XP1 1220 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 DENND1CQ8IV53 801 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 TCEAL8Q8IYN2 117 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 MYRIPQ8NFW9 859 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 SVIPQ8NHG7 77 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 DIS3LQ8TF46 1054 aaKnown RBP2.73□□□□□ -1.97
SRP54-204ENST00000553923 INPP5DQ92835 1189 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 DHX36Q9H2U1 1008 aaKnown RBP2.73□□□□□ -1.97
SRP54-204ENST00000553923 SAP30LQ9HAJ7 183 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 PTPRHQ9HD43 1115 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 OBP2AQ9NY56 170 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 RGS17Q9UGC6 210 aaPredicted RBP2.73□□□□□ -1.97
SRP54-204ENST00000553923 STEAP1Q9UHE8 339 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 VPS51Q9UID3 782 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 ANAPC4Q9UJX5 808 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 SCN5AQ14524 2016 aa2.73□□□□□ -1.97
SRP54-204ENST00000553923 A0A1W2PPL8 197 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 MBD3L4A6NDZ8 208 aaPredicted RBP2.72□□□□□ -1.97
SRP54-204ENST00000553923 MBD3L3A6NE82 208 aaPredicted RBP2.72□□□□□ -1.97
SRP54-204ENST00000553923 H3BML4 177 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 TBX3O15119 743 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 DDNO94850 711 aaPredicted RBP2.72□□□□□ -1.97
SRP54-204ENST00000553923 UBXN7O94888 489 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 PPP1R3DO95685 299 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 CGAP01215 116 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 MYL3P08590 195 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 TMIGD3P0DMS9 266 aaPredicted RBP2.72□□□□□ -1.97
SRP54-204ENST00000553923 CHRNB1P11230 501 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 HSPA6P17066 643 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 NTSR1P30989 418 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 HTR7P34969 479 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 RFX2P48378 723 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 TRAPPC10P48553 1259 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 EIF4A1P60842 406 aaKnown RBP2.72□□□□□ -1.97
SRP54-204ENST00000553923 POU5F1BQ06416 359 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 MTAPQ13126 283 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms