RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 PDCLQ13371 301 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 SLC12A1Q13621 1099 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 KCNB1Q14721 858 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 MFSD13AQ14CX5 517 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 CNGA3Q16281 694 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 FAM187BQ17R55 369 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 RNASE12Q5GAN4 147 aaKnown RBP4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 CCDC70Q6NSX1 233 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 ACSM6Q6P461 480 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 VSTM1Q6UX27 236 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 DCDC5Q6ZRR9 648 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 AMIGO2Q86SJ2 522 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 NPIPB3Q92617 1050 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 USP13Q92995 863 aaPredicted RBP4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 SDCCAG3Q96C92 435 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 PRR11Q96HE9 360 aaPredicted RBP4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 CCDC17Q96LX7 622 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 COG8Q96MW5 612 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 UROC1Q96N76 676 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 FYTTD1Q96QD9 318 aaKnown RBP4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 SNX18Q96RF0 628 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 MACROD1Q9BQ69 325 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 THAP7Q9BT49 309 aaPredicted RBP4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 CHODLQ9H9P2 273 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 KCNK9Q9NPC2 374 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 RXFP3Q9NSD7 469 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 ABHD10Q9NUJ1 306 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 ASB6Q9NWX5 421 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 WNT6Q9Y6F9 365 aa4.09□□□□□ -1.75
EFCAB11-204ENST00000553871 LOC105369274A0A096LPK9 316 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 LOC102723532A0A0G2JNH3 316 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 MBD3L5A6NJ08 208 aaPredicted RBP4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 C3orf70A6NLC5 250 aaPredicted RBP4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 B9A039 149 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 UBE2Q2LH0YL09 131 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 MGST3O14880 152 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 FYB1O15117 783 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 NCAM2O15394 837 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 SEPT4O43236 478 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 SH3BP5O60239 455 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 MT-CO3P00414 261 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 TFRCP02786 760 aaKnown RBP4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 APEHP13798 732 aaKnown RBP4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 KRT4P19013 534 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 CNTFP26441 200 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 DUSP1P28562 367 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 CDK7P50613 346 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 INHBCP55103 352 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 TAS2R50P59544 299 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 RBM6P78332 1123 aaKnown RBP4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 CFHR3Q02985 330 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 TLE3Q04726 772 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 CERKLQ49MI3 558 aaPredicted RBP4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 SUMO4Q6EEV6 95 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 C16orf89Q6UX73 402 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 Q6ZPA2 131 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 MMS22LQ6ZRQ5 1243 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 BCDIN3DQ7Z5W3 292 aaKnown RBP4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 LRRTM4Q86VH4 590 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 C16orf71Q8IYS4 520 aaPredicted RBP4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 OR4N4Q8N0Y3 316 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 Q8N1X5 172 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 AMER2Q8N7J2 671 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 FSIP1Q8NA03 581 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 SRFBP1Q8NEF9 429 aaKnown RBP4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 GLMPQ8WWB7 406 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 AKAP1Q92667 903 aaKnown RBP eCLIP4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 EDC3Q96F86 508 aaKnown RBP4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 HIC2Q96JB3 615 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 PIGSQ96S52 555 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 RNF26Q9BY78 433 aaPredicted RBP4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 TRIM2Q9C040 744 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 CDCP1Q9H5V8 836 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 NOD2Q9HC29 1040 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 RIC8AQ9NPQ8 531 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 G6PC2Q9NQR9 355 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 C9orf78Q9NZ63 289 aaPredicted RBP4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 SLC12A4Q9UP95 1085 aa4.08□□□□□ -1.76
EFCAB11-204ENST00000553871 AGAP5A6NIR3 686 aa4.07□□□□□ -1.76
EFCAB11-204ENST00000553871 H7C1Q1 480 aa4.07□□□□□ -1.76
EFCAB11-204ENST00000553871 SMIM22K7EJ46 135 aa4.07□□□□□ -1.76
EFCAB11-204ENST00000553871 M0QZQ0 153 aa4.07□□□□□ -1.76
EFCAB11-204ENST00000553871 CLIC1O00299 241 aa4.07□□□□□ -1.76
EFCAB11-204ENST00000553871 HNRNPRO43390 633 aaKnown RBP4.07□□□□□ -1.76
EFCAB11-204ENST00000553871 FSHBP01225 129 aa4.07□□□□□ -1.76
EFCAB11-204ENST00000553871 PEPDP12955 493 aa4.07□□□□□ -1.76
EFCAB11-204ENST00000553871 XBP1P17861 261 aa4.07□□□□□ -1.76
EFCAB11-204ENST00000553871 ITPKBP27987 946 aa4.07□□□□□ -1.76
EFCAB11-204ENST00000553871 VPS41P49754 854 aa4.07□□□□□ -1.76
EFCAB11-204ENST00000553871 RCAN1P53805 252 aa4.07□□□□□ -1.76
EFCAB11-204ENST00000553871 RPL15P61313 204 aaKnown RBP4.07□□□□□ -1.76
EFCAB11-204ENST00000553871 KLF10Q13118 480 aa4.07□□□□□ -1.76
EFCAB11-204ENST00000553871 ANKRD1Q15327 319 aa4.07□□□□□ -1.76
EFCAB11-204ENST00000553871 SMAD1Q15797 465 aaKnown RBP4.07□□□□□ -1.76
EFCAB11-204ENST00000553871 GGNQ86UU5 652 aa4.07□□□□□ -1.76
EFCAB11-204ENST00000553871 ARHGEF25Q86VW2 580 aa4.07□□□□□ -1.76
EFCAB11-204ENST00000553871 LDLRAD3Q86YD5 345 aa4.07□□□□□ -1.76
EFCAB11-204ENST00000553871 ADPRHL1Q8NDY3 354 aa4.07□□□□□ -1.76
EFCAB11-204ENST00000553871 TBATAQ96M53 351 aa4.07□□□□□ -1.76
EFCAB11-204ENST00000553871 BBC3Q96PG8 261 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms