RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 PASD1Q8IV76 773 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 CCDC117Q8IWD4 279 aaPredicted RBP8.71□□□□□ -1.02
PSEN1-209ENST00000553855 DHX40Q8IX18 779 aaKnown RBP8.71□□□□□ -1.02
PSEN1-209ENST00000553855 CCDC105Q8IYK2 499 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 SYNPOQ8N3V7 929 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 TMEM105Q8N8V8 129 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 ZDHHC1Q8WTX9 485 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 CD101Q93033 1021 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 PLD4Q96BZ4 506 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 PPP1R13BQ96KQ4 1090 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 SERPINB11Q96P15 392 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 XPO6Q96QU8 1125 aaKnown RBP8.71□□□□□ -1.02
PSEN1-209ENST00000553855 ERGIC2Q96RQ1 377 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 P2RY13Q9BPV8 354 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 KLF16Q9BXK1 252 aaPredicted RBP8.71□□□□□ -1.02
PSEN1-209ENST00000553855 LHX5Q9H2C1 402 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 LMAN1LQ9HAT1 526 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 CBX8Q9HC52 389 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 HPS4Q9NQG7 708 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 SEPT11Q9NVA2 429 aaKnown RBP8.71□□□□□ -1.02
PSEN1-209ENST00000553855 NUDT5Q9UKK9 219 aa8.71□□□□□ -1.02
PSEN1-209ENST00000553855 HBS1LQ9Y450 684 aaKnown RBP8.71□□□□□ -1.02
PSEN1-209ENST00000553855 TYW5A2RUC4 315 aaKnown RBP8.7□□□□□ -1.02
PSEN1-209ENST00000553855 F8VZ95 297 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 ARNTLO00327 626 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 MDM4O15151 490 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 CBFA2T2O43439 604 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 PI15O43692 258 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 GFPT2O94808 682 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 LSM8O95777 96 aaKnown RBP8.7□□□□□ -1.02
PSEN1-209ENST00000553855 CALCAP01258 141 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 APODP05090 189 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 NCAM1P13591 858 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 ATP1A3P13637 1013 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 CYP11B1P15538 503 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 DESP17661 470 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 CORO1AP31146 461 aaKnown RBP8.7□□□□□ -1.02
PSEN1-209ENST00000553855 GBP1P32455 592 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 GJA4P35212 333 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 SOX5P35711 763 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 PTGIRP43119 386 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 MAPK8P45983 427 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 UBASH3AP57075 661 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 CENPCQ03188 943 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 CBLBQ13191 982 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 PDCLQ13371 301 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 DHCR24Q15392 516 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 TSNAXIP1Q2TAA8 658 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 EFHC1Q5JVL4 640 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 SH3PXD2AQ5TCZ1 1133 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 TAF3Q5VWG9 929 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 OR6B2Q6IFH4 312 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 Q6ZVU0 165 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 SLC47A2Q86VL8 602 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 ERICH1Q86X53 443 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 ZDHHC17Q8IUH5 632 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 UNC45BQ8IWX7 931 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 ALDH16A1Q8IZ83 802 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 ADGRG2Q8IZP9 1017 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 ZNF397Q8NF99 534 aaPredicted RBP8.7□□□□□ -1.02
PSEN1-209ENST00000553855 EDEM1Q92611 657 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 ATOH1Q92858 354 aaPredicted RBP8.7□□□□□ -1.02
PSEN1-209ENST00000553855 RNF34Q969K3 372 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 ALKBH8Q96BT7 664 aaKnown RBP8.7□□□□□ -1.02
PSEN1-209ENST00000553855 DDX50Q9BQ39 737 aaKnown RBP8.7□□□□□ -1.02
PSEN1-209ENST00000553855 GANQ9H2C0 597 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 LINC00597Q9H2U6 94 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 TSPY26PQ9H489 355 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 POPDC2Q9HBU9 364 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 OSER1Q9NX31 292 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 WDR35Q9P2L0 1181 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 SLC12A6Q9UHW9 1150 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 ZNF232Q9UNY5 417 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 WASF2Q9Y6W5 498 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 DOCK6Q96HP0 2047 aa8.7□□□□□ -1.02
PSEN1-209ENST00000553855 MYO10Q9HD67 2058 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 C5orf42Q9H799 3197 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 NUP210Q8TEM1 1887 aaPredicted RBP8.69□□□□□ -1.02
PSEN1-209ENST00000553855 A0A1W2PQC6 194 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 YJEFN3A6XGL0 299 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 E5RJQ4 531 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 E7ENQ6 273 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 TRDMT1O14717 391 aaKnown RBP8.69□□□□□ -1.02
PSEN1-209ENST00000553855 SCAMP3O14828 347 aaKnown RBP8.69□□□□□ -1.02
PSEN1-209ENST00000553855 APOEP02649 317 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 CYP17A1P05093 508 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 GLI1P08151 1106 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 TPM1P09493 284 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 PNMA6AP0CW24 399 aaPredicted RBP8.69□□□□□ -1.02
PSEN1-209ENST00000553855 FERP16591 822 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 EIF2DP41214 584 aaKnown RBP8.69□□□□□ -1.02
PSEN1-209ENST00000553855 SLC11A2P49281 568 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 GALK1P51570 392 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 CCR3P51677 355 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 TBX4P57082 545 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 ZNF445P59923 1031 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 YWHAZP63104 245 aaKnown RBP8.69□□□□□ -1.02
PSEN1-209ENST00000553855 CDK17Q00537 523 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 ARID5AQ03989 594 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 IQCB1Q15051 598 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms