RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 TAF3Q5VWG9 929 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 TMEM92Q6UXU6 159 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 DHX40Q8IX18 779 aaKnown RBP10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 TMEM35BQ8NCS4 154 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 ADAM32Q8TC27 787 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 EPS8L1Q8TE68 723 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 IPO4Q8TEX9 1081 aaKnown RBP10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 AZIN2Q96A70 460 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 TMA16Q96EY4 203 aaKnown RBP10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 SPAG5Q96R06 1193 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 NLRC4Q9NPP4 1024 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 LAMA1P25391 3075 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 GFRA2O00451 464 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 IRAK2O43187 625 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 ACSL4O60488 711 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 TSPAN3O60637 253 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 HSF2BPO75031 334 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 RPP40O75818 363 aaKnown RBP10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 GFPT2O94808 682 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 TRUB2O95900 331 aaKnown RBP10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 ERBB2P04626 1255 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 HOXD9P28356 352 aaPredicted RBP10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 NTSR1P30989 418 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 JAM2P57087 298 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 LPAL2Q16609 132 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 OR6B2Q6IFH4 312 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 ANO7Q6IWH7 933 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 OLFML1Q6UWY5 402 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 FAM183BPQ6ZVS7 135 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 CEP68Q76N32 757 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 NOP9Q86U38 636 aaKnown RBP10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 TAC4Q86UU9 113 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 ZDHHC17Q8IUH5 632 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 CHPFQ8IZ52 775 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 DCLK2Q8N568 766 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 NEK11Q8NG66 645 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 GAB3Q8WWW8 586 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 SLC39A13Q96H72 371 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 FCRL2Q96LA5 508 aaPredicted RBP10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 ERGIC2Q96RQ1 377 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 FUCA2Q9BTY2 467 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 SLC2A11Q9BYW1 496 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 POLMQ9NP87 494 aaPredicted RBP10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 ASNSD1Q9NWL6 643 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 NCDNQ9UBB6 729 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 HCN2Q9UL51 889 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 CLEC4EQ9ULY5 219 aa10.62□□□□□ -0.71
HNRNPC-208ENST00000553753 SYCE3A1L190 88 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 GRAP2O75791 330 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 ALDH1A2O94788 518 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 LSM8O95777 96 aaKnown RBP10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 IGLV3-25P01717 112 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 MMEP08473 750 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 HNRNPLP14866 589 aaKnown RBP eCLIP10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 PTMSP20962 102 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 SOX5P35711 763 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 STAT1P42224 750 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 SLC6A3Q01959 620 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 EIF4EBP2Q13542 120 aaPredicted RBP10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 GEN1Q17RS7 908 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 FAM133BQ5BKY9 247 aaKnown RBP10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 MPP7Q5T2T1 576 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 PIK3R6Q5UE93 754 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 EGFLAMQ63HQ2 1017 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 SDE2Q6IQ49 451 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 RFWD3Q6PCD5 774 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 SLC26A9Q7LBE3 791 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 RASSF3Q86WH2 238 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 ERICH1Q86X53 443 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 ZNF677Q86XU0 584 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 DEFB106AQ8N104 65 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 MDGA1Q8NFP4 955 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 C18orf8Q96DM3 657 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 SLC2A13Q96QE2 648 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 DDX50Q9BQ39 737 aaKnown RBP10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 IRX2Q9BZI1 471 aaPredicted RBP10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 SPTBN4Q9H254 2564 aa10.61□□□□□ -0.71
HNRNPC-208ENST00000553753 GOLGA6L7A0A1B0GV03 622 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 APOEP02649 317 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 SLC6A4P31645 630 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 GBP1P32455 592 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 GABRB2P47870 512 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 PITX1P78337 314 aaPredicted RBP10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 CDK17Q00537 523 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 ZC3H12AQ5D1E8 599 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 LAIR1Q6GTX8 287 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 CACNA2D4Q7Z3S7 1137 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 ANKS1BQ7Z6G8 1248 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 ZNF397Q8NF99 534 aaPredicted RBP10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 ACOX2Q99424 681 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 NOCTQ9UK39 431 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 GMEB2Q9UKD1 530 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 SPAG17Q6Q759 2223 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 EML5Q05BV3 1969 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 MOCS2O96007 188 aaPredicted RBP10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 SLC2A3P11169 496 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 HOXB2P14652 356 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 HLA-FP30511 346 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 NOS2P35228 1153 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms