RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 ZNF233A6NK53 670 aa14.51□□□□□ -0.09
PRPF39-204ENST00000553605 MDM4O15151 490 aa14.51□□□□□ -0.09
PRPF39-204ENST00000553605 AP1G2O75843 785 aa14.51□□□□□ -0.09
PRPF39-204ENST00000553605 STC2O76061 302 aa14.51□□□□□ -0.09
PRPF39-204ENST00000553605 DXOO77932 396 aaKnown RBP14.51□□□□□ -0.09
PRPF39-204ENST00000553605 KLKB1P03952 638 aa14.51□□□□□ -0.09
PRPF39-204ENST00000553605 CD38P28907 300 aa14.51□□□□□ -0.09
PRPF39-204ENST00000553605 GABREP78334 506 aa14.51□□□□□ -0.09
PRPF39-204ENST00000553605 TTC31Q49AM3 519 aaPredicted RBP14.51□□□□□ -0.09
PRPF39-204ENST00000553605 SFMBT2Q5VUG0 894 aa14.51□□□□□ -0.09
PRPF39-204ENST00000553605 KLHDC10Q6PID8 442 aa14.51□□□□□ -0.09
PRPF39-204ENST00000553605 WDR49Q8IV35 697 aa14.51□□□□□ -0.09
PRPF39-204ENST00000553605 ZNF366Q8N895 744 aa14.51□□□□□ -0.09
PRPF39-204ENST00000553605 TMEM245Q9H330 911 aa14.51□□□□□ -0.09
PRPF39-204ENST00000553605 EBF2Q9HAK2 575 aa14.51□□□□□ -0.09
PRPF39-204ENST00000553605 AASDHPPTQ9NRN7 309 aa14.51□□□□□ -0.09
PRPF39-204ENST00000553605 NUDT5Q9UKK9 219 aa14.51□□□□□ -0.09
PRPF39-204ENST00000553605 PLA2G4CQ9UP65 541 aa14.51□□□□□ -0.09
PRPF39-204ENST00000553605 NCKAP1Q9Y2A7 1128 aa14.51□□□□□ -0.09
PRPF39-204ENST00000553605 SSUH2Q9Y2M2 353 aa14.51□□□□□ -0.09
PRPF39-204ENST00000553605 TP53BP1Q12888 1972 aaPredicted RBP14.51□□□□□ -0.09
PRPF39-204ENST00000553605 TEX15Q9BXT5 2789 aa14.51□□□□□ -0.09
PRPF39-204ENST00000553605 K7ENP7 123 aa14.5□□□□□ -0.09
PRPF39-204ENST00000553605 TERTO14746 1132 aaKnown RBP14.5□□□□□ -0.09
PRPF39-204ENST00000553605 BEST1O76090 585 aa14.5□□□□□ -0.09
PRPF39-204ENST00000553605 CYBBP04839 570 aa14.5□□□□□ -0.09
PRPF39-204ENST00000553605 RARGP13631 454 aa14.5□□□□□ -0.09
PRPF39-204ENST00000553605 FNDC3BQ53EP0 1204 aaKnown RBP14.5□□□□□ -0.09
PRPF39-204ENST00000553605 C10orf120Q5SQS8 335 aa14.5□□□□□ -0.09
PRPF39-204ENST00000553605 INO80CQ6PI98 192 aaPredicted RBP14.5□□□□□ -0.09
PRPF39-204ENST00000553605 ZNF574Q6ZN55 896 aaPredicted RBP14.5□□□□□ -0.09
PRPF39-204ENST00000553605 ZMIZ2Q8NF64 920 aa14.5□□□□□ -0.09
PRPF39-204ENST00000553605 SMOQ99835 787 aa14.5□□□□□ -0.09
PRPF39-204ENST00000553605 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.5□□□□□ -0.09
PRPF39-204ENST00000553605 SLC2A11Q9BYW1 496 aa14.5□□□□□ -0.09
PRPF39-204ENST00000553605 FBRSQ9HAH7 460 aa14.5□□□□□ -0.09
PRPF39-204ENST00000553605 NMUR1Q9HB89 426 aa14.5□□□□□ -0.09
PRPF39-204ENST00000553605 PRSS16Q9NQE7 514 aa14.5□□□□□ -0.09
PRPF39-204ENST00000553605 KRT82Q9NSB4 513 aa14.5□□□□□ -0.09
PRPF39-204ENST00000553605 LIMCH1Q9UPQ0 1083 aa14.5□□□□□ -0.09
PRPF39-204ENST00000553605 PLXNA2O75051 1894 aa14.5□□□□□ -0.09
PRPF39-204ENST00000553605 A0A1W2PR77 199 aa14.49□□□□□ -0.09
PRPF39-204ENST00000553605 KIAA0391O15091 583 aaKnown RBP14.49□□□□□ -0.09
PRPF39-204ENST00000553605 GAP43P17677 238 aa14.49□□□□□ -0.09
PRPF39-204ENST00000553605 RXRGP48443 463 aa14.49□□□□□ -0.09
PRPF39-204ENST00000553605 LSSP48449 732 aa14.49□□□□□ -0.09
PRPF39-204ENST00000553605 CASP5P51878 434 aa14.49□□□□□ -0.09
PRPF39-204ENST00000553605 GALCP54803 685 aa14.49□□□□□ -0.09
PRPF39-204ENST00000553605 MAP3K7CLP57077 242 aa14.49□□□□□ -0.09
PRPF39-204ENST00000553605 PROX2Q3B8N5 592 aa14.49□□□□□ -0.09
PRPF39-204ENST00000553605 C6orf132Q5T0Z8 1188 aa14.49□□□□□ -0.09
PRPF39-204ENST00000553605 CBWD2Q8IUF1 395 aa14.49□□□□□ -0.09
PRPF39-204ENST00000553605 FUKQ8N0W3 1084 aa14.49□□□□□ -0.09
PRPF39-204ENST00000553605 GANCQ8TET4 914 aa14.49□□□□□ -0.09
PRPF39-204ENST00000553605 CYB5D2Q8WUJ1 264 aa14.49□□□□□ -0.09
PRPF39-204ENST00000553605 GOLGA1Q92805 767 aa14.49□□□□□ -0.09
PRPF39-204ENST00000553605 TNIP3Q96KP6 325 aa14.49□□□□□ -0.09
PRPF39-204ENST00000553605 ERVMER34-1Q9H9K5 563 aa14.49□□□□□ -0.09
PRPF39-204ENST00000553605 CSNK1G1Q9HCP0 422 aa14.49□□□□□ -0.09
PRPF39-204ENST00000553605 THSD1Q9NS62 852 aa14.49□□□□□ -0.09
PRPF39-204ENST00000553605 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.49□□□□□ -0.09
PRPF39-204ENST00000553605 ANKMY1Q9P2S6 941 aa14.49□□□□□ -0.09
PRPF39-204ENST00000553605 SCML2Q9UQR0 700 aa14.49□□□□□ -0.09
PRPF39-204ENST00000553605 USP9XQ93008 2570 aaPredicted RBP14.49□□□□□ -0.09
PRPF39-204ENST00000553605 A0A1W2PQH9 124 aa14.48□□□□□ -0.09
PRPF39-204ENST00000553605 TLR4O00206 839 aa14.48□□□□□ -0.09
PRPF39-204ENST00000553605 WNT9AO14904 365 aa14.48□□□□□ -0.09
PRPF39-204ENST00000553605 CYP26A1O43174 497 aa14.48□□□□□ -0.09
PRPF39-204ENST00000553605 USP12O75317 370 aa14.48□□□□□ -0.09
PRPF39-204ENST00000553605 NXPH1P58417 271 aa14.48□□□□□ -0.09
PRPF39-204ENST00000553605 MCTP1Q6DN14 999 aa14.48□□□□□ -0.09
PRPF39-204ENST00000553605 NCEH1Q6PIU2 408 aa14.48□□□□□ -0.09
PRPF39-204ENST00000553605 ATG14Q6ZNE5 492 aa14.48□□□□□ -0.09
PRPF39-204ENST00000553605 USP30Q70CQ3 517 aa14.48□□□□□ -0.09
PRPF39-204ENST00000553605 KANSL1Q7Z3B3 1105 aa14.48□□□□□ -0.09
PRPF39-204ENST00000553605 OXR1Q8N573 874 aa14.48□□□□□ -0.09
PRPF39-204ENST00000553605 DDI1Q8WTU0 396 aa14.48□□□□□ -0.09
PRPF39-204ENST00000553605 VCPIP1Q96JH7 1222 aa14.48□□□□□ -0.09
PRPF39-204ENST00000553605 DCLK3Q9C098 648 aa14.48□□□□□ -0.09
PRPF39-204ENST00000553605 POLR1BQ9H9Y6 1135 aa14.48□□□□□ -0.09
PRPF39-204ENST00000553605 STAU1O95793 577 aaKnown RBP14.47□□□□□ -0.09
PRPF39-204ENST00000553605 DLATP10515 647 aaKnown RBP14.47□□□□□ -0.09
PRPF39-204ENST00000553605 TNNI1P19237 187 aa14.47□□□□□ -0.09
PRPF39-204ENST00000553605 CORO1AP31146 461 aaKnown RBP14.47□□□□□ -0.09
PRPF39-204ENST00000553605 COG7P83436 770 aa14.47□□□□□ -0.09
PRPF39-204ENST00000553605 TRPC3Q13507 836 aa14.47□□□□□ -0.09
PRPF39-204ENST00000553605 ALCAMQ13740 583 aa14.47□□□□□ -0.09
PRPF39-204ENST00000553605 SLC45A4Q5BKX6 768 aa14.47□□□□□ -0.09
PRPF39-204ENST00000553605 CDCP2Q5VXM1 449 aa14.47□□□□□ -0.09
PRPF39-204ENST00000553605 ZNF776Q68DI1 518 aaPredicted RBP14.47□□□□□ -0.09
PRPF39-204ENST00000553605 CCDC81Q6ZN84 652 aa14.47□□□□□ -0.09
PRPF39-204ENST00000553605 TADA2BQ86TJ2 420 aa14.47□□□□□ -0.09
PRPF39-204ENST00000553605 EXD3Q8N9H8 876 aa14.47□□□□□ -0.09
PRPF39-204ENST00000553605 DEPDC7Q96QD5 511 aa14.47□□□□□ -0.09
PRPF39-204ENST00000553605 ASCL3Q9NQ33 180 aa14.47□□□□□ -0.09
PRPF39-204ENST00000553605 OLFML3Q9NRN5 406 aa14.47□□□□□ -0.09
PRPF39-204ENST00000553605 FBXL12Q9NXK8 326 aa14.47□□□□□ -0.09
PRPF39-204ENST00000553605 AGO1Q9UL18 857 aaKnown RBP14.47□□□□□ -0.09
PRPF39-204ENST00000553605 SCML1Q9UN30 329 aa14.47□□□□□ -0.09
PRPF39-204ENST00000553605 BOD1L1Q8NFC6 3051 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms