RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 F8VZ95 297 aa24.56■■□□□ 1.52
TDP1-205ENST00000553527 GRAP2O75791 330 aa24.56■■□□□ 1.52
TDP1-205ENST00000553527 GFPT2O94808 682 aa24.56■■□□□ 1.52
TDP1-205ENST00000553527 PENKP01210 267 aaPredicted RBP24.56■■□□□ 1.52
TDP1-205ENST00000553527 CNR2P34972 360 aa24.56■■□□□ 1.52
TDP1-205ENST00000553527 CRY1Q16526 586 aa24.56■■□□□ 1.52
TDP1-205ENST00000553527 EOGTQ5NDL2 527 aa24.56■■□□□ 1.52
TDP1-205ENST00000553527 ADGRF1Q5T601 910 aa24.56■■□□□ 1.52
TDP1-205ENST00000553527 ANO7Q6IWH7 933 aa24.56■■□□□ 1.52
TDP1-205ENST00000553527 SARM1Q6SZW1 724 aa24.56■■□□□ 1.52
TDP1-205ENST00000553527 UNC45BQ8IWX7 931 aa24.56■■□□□ 1.52
TDP1-205ENST00000553527 POPDC2Q9HBU9 364 aa24.56■■□□□ 1.52
TDP1-205ENST00000553527 CLEC4EQ9ULY5 219 aa24.56■■□□□ 1.52
TDP1-205ENST00000553527 INVSQ9Y283 1065 aa24.56■■□□□ 1.52
TDP1-205ENST00000553527 EPHB6O15197 1021 aa24.55■■□□□ 1.52
TDP1-205ENST00000553527 RPP40O75818 363 aaKnown RBP24.55■■□□□ 1.52
TDP1-205ENST00000553527 ERBB2P04626 1255 aa24.55■■□□□ 1.52
TDP1-205ENST00000553527 HNRNPLP14866 589 aaKnown RBP eCLIP24.55■■□□□ 1.52
TDP1-205ENST00000553527 SLC11A2P49281 568 aa24.55■■□□□ 1.52
TDP1-205ENST00000553527 MPPE1Q53F39 396 aa24.55■■□□□ 1.52
TDP1-205ENST00000553527 DCAF6Q58WW2 860 aa24.55■■□□□ 1.52
TDP1-205ENST00000553527 EGFLAMQ63HQ2 1017 aa24.55■■□□□ 1.52
TDP1-205ENST00000553527 RFWD3Q6PCD5 774 aa24.55■■□□□ 1.52
TDP1-205ENST00000553527 FAM183BPQ6ZVS7 135 aa24.55■■□□□ 1.52
TDP1-205ENST00000553527 TAC4Q86UU9 113 aa24.55■■□□□ 1.52
TDP1-205ENST00000553527 TMA16Q96EY4 203 aaKnown RBP24.55■■□□□ 1.52
TDP1-205ENST00000553527 SERPINB11Q96P15 392 aa24.55■■□□□ 1.52
TDP1-205ENST00000553527 TRIM62Q9BVG3 475 aa24.55■■□□□ 1.52
TDP1-205ENST00000553527 TPSD1Q9BZJ3 242 aa24.55■■□□□ 1.52
TDP1-205ENST00000553527 HCN2Q9UL51 889 aa24.55■■□□□ 1.52
TDP1-205ENST00000553527 SPAG17Q6Q759 2223 aa24.55■■□□□ 1.52
TDP1-205ENST00000553527 EP300Q09472 2414 aaPredicted RBP24.55■■□□□ 1.52
TDP1-205ENST00000553527 SYNJ2BP-COX16A0A087WUM0 186 aa24.54■■□□□ 1.52
TDP1-205ENST00000553527 ADAM23O75077 832 aa24.54■■□□□ 1.52
TDP1-205ENST00000553527 MOCS2O96007 188 aaPredicted RBP24.54■■□□□ 1.52
TDP1-205ENST00000553527 IGLV3-27P01718 113 aa24.54■■□□□ 1.52
TDP1-205ENST00000553527 EFHC1Q5JVL4 640 aa24.54■■□□□ 1.52
TDP1-205ENST00000553527 NUGGCQ68CJ6 796 aa24.54■■□□□ 1.52
TDP1-205ENST00000553527 NOP9Q86U38 636 aaKnown RBP24.54■■□□□ 1.52
TDP1-205ENST00000553527 FAM217AQ8IXS0 508 aa24.54■■□□□ 1.52
TDP1-205ENST00000553527 KIAA2013Q8IYS2 634 aa24.54■■□□□ 1.52
TDP1-205ENST00000553527 DEFB106AQ8N104 65 aa24.54■■□□□ 1.52
TDP1-205ENST00000553527 TMEM35BQ8NCS4 154 aa24.54■■□□□ 1.52
TDP1-205ENST00000553527 IPO4Q8TEX9 1081 aaKnown RBP24.54■■□□□ 1.52
TDP1-205ENST00000553527 SPAG5Q96R06 1193 aa24.54■■□□□ 1.52
TDP1-205ENST00000553527 ACOX2Q99424 681 aa24.54■■□□□ 1.52
TDP1-205ENST00000553527 COX16Q9P0S2 106 aa24.54■■□□□ 1.52
TDP1-205ENST00000553527 FBXO10Q9UK96 956 aa24.54■■□□□ 1.52
TDP1-205ENST00000553527 CCDC163A0A0D9SF12 145 aa24.53■■□□□ 1.52
TDP1-205ENST00000553527 ACSL4O60488 711 aa24.53■■□□□ 1.52
TDP1-205ENST00000553527 MMEP08473 750 aa24.53■■□□□ 1.52
TDP1-205ENST00000553527 CHRM1P11229 460 aaPredicted RBP24.53■■□□□ 1.52
TDP1-205ENST00000553527 PBX1P40424 430 aa24.53■■□□□ 1.52
TDP1-205ENST00000553527 SGSHP51688 502 aa24.53■■□□□ 1.52
TDP1-205ENST00000553527 SNX16P57768 344 aa24.53■■□□□ 1.52
TDP1-205ENST00000553527 PITX1P78337 314 aaPredicted RBP24.53■■□□□ 1.52
TDP1-205ENST00000553527 GEN1Q17RS7 908 aa24.53■■□□□ 1.52
TDP1-205ENST00000553527 HSF5Q4G112 596 aaPredicted RBP24.53■■□□□ 1.52
TDP1-205ENST00000553527 PTPN20Q4JDL3 420 aa24.53■■□□□ 1.52
TDP1-205ENST00000553527 SMYD5Q6GMV2 418 aa24.53■■□□□ 1.52
TDP1-205ENST00000553527 SDE2Q6IQ49 451 aa24.53■■□□□ 1.52
TDP1-205ENST00000553527 CACNA2D4Q7Z3S7 1137 aa24.53■■□□□ 1.52
TDP1-205ENST00000553527 TRMT11Q7Z4G4 463 aaKnown RBP24.53■■□□□ 1.52
TDP1-205ENST00000553527 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.53■■□□□ 1.52
TDP1-205ENST00000553527 CHPFQ8IZ52 775 aa24.53■■□□□ 1.52
TDP1-205ENST00000553527 PGBD3Q8N328 593 aa24.53■■□□□ 1.52
TDP1-205ENST00000553527 GAB3Q8WWW8 586 aa24.53■■□□□ 1.52
TDP1-205ENST00000553527 FCRL2Q96LA5 508 aaPredicted RBP24.53■■□□□ 1.52
TDP1-205ENST00000553527 TRIM5Q9C035 493 aa24.53■■□□□ 1.52
TDP1-205ENST00000553527 POLMQ9NP87 494 aaPredicted RBP24.53■■□□□ 1.52
TDP1-205ENST00000553527 BCCIPQ9P287 314 aaKnown RBP eCLIP24.53■■□□□ 1.52
TDP1-205ENST00000553527 GMEB2Q9UKD1 530 aa24.53■■□□□ 1.52
TDP1-205ENST00000553527 TLR6Q9Y2C9 796 aa24.53■■□□□ 1.52
TDP1-205ENST00000553527 STARD13Q9Y3M8 1113 aa24.53■■□□□ 1.52
TDP1-205ENST00000553527 ALDH1A2O94788 518 aa24.52■■□□□ 1.52
TDP1-205ENST00000553527 LATS1O95835 1130 aa24.52■■□□□ 1.52
TDP1-205ENST00000553527 TRUB2O95900 331 aaKnown RBP24.52■■□□□ 1.52
TDP1-205ENST00000553527 NTSR1P30989 418 aa24.52■■□□□ 1.52
TDP1-205ENST00000553527 SLC6A4P31645 630 aa24.52■■□□□ 1.52
TDP1-205ENST00000553527 RNASE9P60153 205 aaKnown RBP24.52■■□□□ 1.52
TDP1-205ENST00000553527 RING1Q06587 406 aa24.52■■□□□ 1.52
TDP1-205ENST00000553527 BEND5Q7L4P6 421 aa24.52■■□□□ 1.52
TDP1-205ENST00000553527 MDGA1Q8NFP4 955 aa24.52■■□□□ 1.52
TDP1-205ENST00000553527 KCNV2Q8TDN2 545 aa24.52■■□□□ 1.52
TDP1-205ENST00000553527 DDX1Q92499 740 aaKnown RBP24.52■■□□□ 1.52
TDP1-205ENST00000553527 STIM2Q9P246 746 aa24.52■■□□□ 1.52
TDP1-205ENST00000553527 EBF1Q9UH73 591 aa24.52■■□□□ 1.52
TDP1-205ENST00000553527 OTOGLQ3ZCN5 2332 aa24.51■■□□□ 1.51
TDP1-205ENST00000553527 DCLK1O15075 740 aa24.51■■□□□ 1.51
TDP1-205ENST00000553527 AP5Z1O43299 807 aa24.51■■□□□ 1.51
TDP1-205ENST00000553527 TBL1XO60907 577 aa24.51■■□□□ 1.51
TDP1-205ENST00000553527 HOXB2P14652 356 aa24.51■■□□□ 1.51
TDP1-205ENST00000553527 HOXD9P28356 352 aaPredicted RBP24.51■■□□□ 1.51
TDP1-205ENST00000553527 SOX5P35711 763 aa24.51■■□□□ 1.51
TDP1-205ENST00000553527 CDK17Q00537 523 aa24.51■■□□□ 1.51
TDP1-205ENST00000553527 SLC6A3Q01959 620 aa24.51■■□□□ 1.51
TDP1-205ENST00000553527 C2CD6Q53TS8 623 aa24.51■■□□□ 1.51
TDP1-205ENST00000553527 ZC3H12AQ5D1E8 599 aaKnown RBP24.51■■□□□ 1.51
TDP1-205ENST00000553527 KBTBD6Q86V97 674 aa24.51■■□□□ 1.51
TDP1-205ENST00000553527 ERICH1Q86X53 443 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms