RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 BCKDHBP21953 392 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 HOXD9P28356 352 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-207ENST00000553290 TBX4P57082 545 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 APBA1Q02410 837 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 PTK2Q05397 1052 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 NNTQ13423 1086 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 EIF4HQ15056 248 aaKnown RBP13.49□□□□□ -0.25
ACTN1-207ENST00000553290 SF3A2Q15428 464 aaKnown RBP13.49□□□□□ -0.25
ACTN1-207ENST00000553290 CCDC6Q16204 474 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 GEN1Q17RS7 908 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 MAP7D1Q3KQU3 841 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 MIIPQ5JXC2 388 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 SPDYCQ5MJ68 293 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 LPCAT2Q7L5N7 544 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 DQX1Q8TE96 717 aaKnown RBP13.49□□□□□ -0.25
ACTN1-207ENST00000553290 DDX50Q9BQ39 737 aaKnown RBP13.49□□□□□ -0.25
ACTN1-207ENST00000553290 SIX2Q9NPC8 291 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 ACP6Q9NPH0 428 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 ELOVL2Q9NXB9 296 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 CACNA2D2Q9NY47 1150 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 THAP10Q9P2Z0 257 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-207ENST00000553290 DNAJC12Q9UKB3 198 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 PCDHGC3Q9UN70 934 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 STON1Q9Y6Q2 735 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 DNAH14Q0VDD8 3507 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 E5RJQ4 531 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 GOLGA6L22H0YM25 854 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 CAPN9O14815 690 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 IRAK2O43187 625 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 PAPSS1O43252 624 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-207ENST00000553290 GDF9O60383 454 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 ACSL4O60488 711 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 DHPSP49366 369 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-207ENST00000553290 LIMK1P53667 647 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 PDCLQ13371 301 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 ENPP2Q13822 863 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 STARD3Q14849 445 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 MPP7Q5T2T1 576 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 SLC36A4Q6YBV0 504 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 CYP2U1Q7Z449 544 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 ZNF557Q8N988 423 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-207ENST00000553290 WFIKKN2Q8TEU8 576 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 NOX5Q96PH1 765 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 LHX5Q9H2C1 402 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 POPDC2Q9HBU9 364 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 CD248Q9HCU0 757 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 CALCOCO1Q9P1Z2 691 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 CYTH4Q9UIA0 394 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 CLEC4EQ9ULY5 219 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 NAALADL1Q9UQQ1 740 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 TLR6Q9Y2C9 796 aa13.48□□□□□ -0.25
ACTN1-207ENST00000553290 KCNJ18B7U540 433 aa13.47□□□□□ -0.25
ACTN1-207ENST00000553290 WASH3PC4AMC7 463 aa13.47□□□□□ -0.25
ACTN1-207ENST00000553290 FOXN3O00409 490 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-207ENST00000553290 PES1O00541 588 aaKnown RBP13.47□□□□□ -0.25
ACTN1-207ENST00000553290 AP5Z1O43299 807 aa13.47□□□□□ -0.25
ACTN1-207ENST00000553290 GLI1P08151 1106 aa13.47□□□□□ -0.25
ACTN1-207ENST00000553290 NDUFV2P19404 249 aa13.47□□□□□ -0.25
ACTN1-207ENST00000553290 EEF1GP26641 437 aaKnown RBP13.47□□□□□ -0.25
ACTN1-207ENST00000553290 KRT9P35527 623 aa13.47□□□□□ -0.25
ACTN1-207ENST00000553290 DPP6P42658 865 aa13.47□□□□□ -0.25
ACTN1-207ENST00000553290 SNX16P57768 344 aa13.47□□□□□ -0.25
ACTN1-207ENST00000553290 BPIFB4P59827 614 aa13.47□□□□□ -0.25
ACTN1-207ENST00000553290 YWHAZP63104 245 aaKnown RBP13.47□□□□□ -0.25
ACTN1-207ENST00000553290 ARID5AQ03989 594 aa13.47□□□□□ -0.25
ACTN1-207ENST00000553290 KCNJ12Q14500 433 aa13.47□□□□□ -0.25
ACTN1-207ENST00000553290 ZNF234Q14588 700 aa13.47□□□□□ -0.25
ACTN1-207ENST00000553290 HSP90AA4PQ58FG1 418 aa13.47□□□□□ -0.25
ACTN1-207ENST00000553290 TCP11X2Q5H9J9 407 aa13.47□□□□□ -0.25
ACTN1-207ENST00000553290 PIK3R6Q5UE93 754 aa13.47□□□□□ -0.25
ACTN1-207ENST00000553290 KIAA1211LQ6NV74 962 aa13.47□□□□□ -0.25
ACTN1-207ENST00000553290 ENOX1Q8TC92 643 aaKnown RBP13.47□□□□□ -0.25
ACTN1-207ENST00000553290 SLC39A13Q96H72 371 aa13.47□□□□□ -0.25
ACTN1-207ENST00000553290 PPP1R13BQ96KQ4 1090 aa13.47□□□□□ -0.25
ACTN1-207ENST00000553290 FCRL2Q96LA5 508 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-207ENST00000553290 CIPCQ9C0C6 399 aa13.47□□□□□ -0.25
ACTN1-207ENST00000553290 SMOC1Q9H4F8 434 aa13.47□□□□□ -0.25
ACTN1-207ENST00000553290 SAMSN1Q9NSI8 373 aaKnown RBP13.47□□□□□ -0.25
ACTN1-207ENST00000553290 MBD1Q9UIS9 605 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-207ENST00000553290 RAD54BQ9Y620 910 aa13.47□□□□□ -0.25
ACTN1-207ENST00000553290 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.46□□□□□ -0.25
ACTN1-207ENST00000553290 TYW5A2RUC4 315 aaKnown RBP13.46□□□□□ -0.25
ACTN1-207ENST00000553290 SYNCRIPO60506 623 aaKnown RBP13.46□□□□□ -0.25
ACTN1-207ENST00000553290 HLA-FP30511 346 aa13.46□□□□□ -0.25
ACTN1-207ENST00000553290 SLC6A4P31645 630 aa13.46□□□□□ -0.25
ACTN1-207ENST00000553290 CLCN1P35523 988 aa13.46□□□□□ -0.25
ACTN1-207ENST00000553290 IL12RB1P42701 662 aa13.46□□□□□ -0.25
ACTN1-207ENST00000553290 FAM133BQ5BKY9 247 aaKnown RBP13.46□□□□□ -0.25
ACTN1-207ENST00000553290 EFHC1Q5JVL4 640 aa13.46□□□□□ -0.25
ACTN1-207ENST00000553290 SYPL2Q5VXT5 272 aa13.46□□□□□ -0.25
ACTN1-207ENST00000553290 TMEM215Q68D42 235 aa13.46□□□□□ -0.25
ACTN1-207ENST00000553290 RNF43Q68DV7 783 aa13.46□□□□□ -0.25
ACTN1-207ENST00000553290 IL31Q6EBC2 164 aa13.46□□□□□ -0.25
ACTN1-207ENST00000553290 RFWD3Q6PCD5 774 aa13.46□□□□□ -0.25
ACTN1-207ENST00000553290 RBM43Q6ZSC3 357 aaKnown RBP13.46□□□□□ -0.25
ACTN1-207ENST00000553290 KIAA0907Q7Z7F0 614 aaPredicted RBP13.46□□□□□ -0.25
ACTN1-207ENST00000553290 METTL3Q86U44 580 aaKnown RBP13.46□□□□□ -0.25
ACTN1-207ENST00000553290 TMEFF1Q8IYR6 380 aa13.46□□□□□ -0.25
ACTN1-207ENST00000553290 FAM71AQ8IYT1 594 aa13.46□□□□□ -0.25
ACTN1-207ENST00000553290 AHI1Q8N157 1196 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms