RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 CCDC169A6NNP5 214 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 MCF2LO15068 1137 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 PGRMC2O15173 223 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 UBL4AP11441 157 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 IL1R1P14778 569 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 IL10P22301 178 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 CCNCP24863 283 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 GGT5P36269 586 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 MATR3P43243 847 aaKnown RBP eCLIP4.46□□□□□ -1.7
USP44-208ENST00000552440 IFNAR2P48551 515 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 SESN2P58004 480 aaPredicted RBP4.46□□□□□ -1.7
USP44-208ENST00000552440 CYP4A11Q02928 519 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 TNFAIP1Q13829 316 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 PRICKLE4Q2TBC4 344 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 CR1LQ2VPA4 569 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 DCAF17Q5H9S7 520 aaPredicted RBP4.46□□□□□ -1.7
USP44-208ENST00000552440 WDR93Q6P2C0 686 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 RGS9BPQ6ZS82 235 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 LRRC8DQ7L1W4 858 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 CCDC186Q7Z3E2 898 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 MICU3Q86XE3 530 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 ZBTB8BQ8NAP8 495 aaPredicted RBP4.46□□□□□ -1.7
USP44-208ENST00000552440 OR6B3Q8NGW1 331 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 NFKBIDQ8NI38 313 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 FIBINQ8TAL6 211 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 CALML6Q8TD86 181 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 BRIX1Q8TDN6 353 aaKnown RBP4.46□□□□□ -1.7
USP44-208ENST00000552440 SCFD2Q8WU76 684 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 RMDN1Q96DB5 314 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 CLPTM1LQ96KA5 538 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 C1orf74Q96LT6 269 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 NEK1Q96PY6 1258 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 VRK1Q99986 396 aaPredicted RBP4.46□□□□□ -1.7
USP44-208ENST00000552440 FDXACB1Q9BRP7 624 aaPredicted RBP4.46□□□□□ -1.7
USP44-208ENST00000552440 FUZQ9BT04 418 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 MAK16Q9BXY0 300 aaKnown RBP4.46□□□□□ -1.7
USP44-208ENST00000552440 DPH1Q9BZG8 443 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 KRT23Q9C075 422 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 KLC2Q9H0B6 622 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 BRD8Q9H0E9 1235 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 TP63Q9H3D4 680 aaPredicted RBP4.46□□□□□ -1.7
USP44-208ENST00000552440 MROH8Q9H579 483 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 CHODLQ9H9P2 273 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 NRIP3Q9NQ35 241 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 TBC1D23Q9NUY8 699 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 MRPL15Q9P015 296 aaKnown RBP4.46□□□□□ -1.7
USP44-208ENST00000552440 ZNF212Q9UDV6 495 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 EXOC7Q9UPT5 735 aa4.46□□□□□ -1.7
USP44-208ENST00000552440 SPAG9O60271 1321 aaKnown RBP4.45□□□□□ -1.7
USP44-208ENST00000552440 A8MV72 311 aaPredicted RBP4.45□□□□□ -1.7
USP44-208ENST00000552440 TP73O15350 636 aa4.45□□□□□ -1.7
USP44-208ENST00000552440 ENTPD3O75355 529 aa4.45□□□□□ -1.7
USP44-208ENST00000552440 KRT38O76015 456 aa4.45□□□□□ -1.7
USP44-208ENST00000552440 CCNDBP1O95273 360 aa4.45□□□□□ -1.7
USP44-208ENST00000552440 EGR1P18146 543 aa4.45□□□□□ -1.7
USP44-208ENST00000552440 STIP1P31948 543 aaKnown RBP4.45□□□□□ -1.7
USP44-208ENST00000552440 GARSP41250 739 aaKnown RBP4.45□□□□□ -1.7
USP44-208ENST00000552440 HARS2P49590 506 aaKnown RBP4.45□□□□□ -1.7
USP44-208ENST00000552440 BCAT1P54687 386 aa4.45□□□□□ -1.7
USP44-208ENST00000552440 RPA4Q13156 261 aa4.45□□□□□ -1.7
USP44-208ENST00000552440 MAPKAPK3Q16644 382 aa4.45□□□□□ -1.7
USP44-208ENST00000552440 GEN1Q17RS7 908 aa4.45□□□□□ -1.7
USP44-208ENST00000552440 TRIM71Q2Q1W2 868 aaKnown RBP4.45□□□□□ -1.7
USP44-208ENST00000552440 KHDC1Q4VXA5 237 aaKnown RBP4.45□□□□□ -1.7
USP44-208ENST00000552440 TOR1AIP1Q5JTV8 583 aa4.45□□□□□ -1.7
USP44-208ENST00000552440 KRBOX4Q5JUW0 171 aa4.45□□□□□ -1.7
USP44-208ENST00000552440 LRSAM1Q6UWE0 723 aa4.45□□□□□ -1.7
USP44-208ENST00000552440 MEX3BQ6ZN04 569 aaKnown RBP4.45□□□□□ -1.7
USP44-208ENST00000552440 FAM83HQ6ZRV2 1179 aaPredicted RBP4.45□□□□□ -1.7
USP44-208ENST00000552440 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.45□□□□□ -1.7
USP44-208ENST00000552440 TUSC5Q8IXB3 177 aa4.45□□□□□ -1.7
USP44-208ENST00000552440 WDTC1Q8N5D0 677 aa4.45□□□□□ -1.7
USP44-208ENST00000552440 SMCR8Q8TEV9 937 aaPredicted RBP4.45□□□□□ -1.7
USP44-208ENST00000552440 NCSTNQ92542 709 aa4.45□□□□□ -1.7
USP44-208ENST00000552440 ZNF830Q96NB3 372 aaPredicted RBP4.45□□□□□ -1.7
USP44-208ENST00000552440 RAB3IPQ96QF0 476 aaPredicted RBP4.45□□□□□ -1.7
USP44-208ENST00000552440 SLC25A18Q9H1K4 315 aa4.45□□□□□ -1.7
USP44-208ENST00000552440 SMURF2Q9HAU4 748 aa4.45□□□□□ -1.7
USP44-208ENST00000552440 SLC39A2Q9NP94 309 aa4.45□□□□□ -1.7
USP44-208ENST00000552440 RBM12Q9NTZ6 932 aaKnown RBP4.45□□□□□ -1.7
USP44-208ENST00000552440 PPP4R1LQ9P1A2 415 aa4.45□□□□□ -1.7
USP44-208ENST00000552440 CORO1CQ9ULV4 474 aaPredicted RBP4.45□□□□□ -1.7
USP44-208ENST00000552440 PCDHA1Q9Y5I3 950 aa4.45□□□□□ -1.7
USP44-208ENST00000552440 MYO15BQ96JP2 1530 aa4.45□□□□□ -1.7
USP44-208ENST00000552440 CLRN2A0PK11 232 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 A4D1N5 150 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 IKBKBO14920 756 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 WDR46O15213 610 aaKnown RBP4.44□□□□□ -1.7
USP44-208ENST00000552440 DNPH1O43598 174 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 STX6O43752 255 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 B4GALT3O60512 393 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 NEMFO60524 1076 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 RTN2O75298 545 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 SEC24DO94855 1032 aaPredicted RBP4.44□□□□□ -1.7
USP44-208ENST00000552440 GLP2RO95838 553 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 FTCDO95954 541 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 LRG1P02750 347 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 TOP1P11387 765 aaKnown RBP4.44□□□□□ -1.7
USP44-208ENST00000552440 KCNA5P22460 613 aa4.44□□□□□ -1.7
USP44-208ENST00000552440 HSPA1LP34931 641 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms