RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 SULT1E1P49888 294 aa19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 SATB1Q01826 763 aa19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 CENPCQ03188 943 aa19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 KLHL30Q0D2K2 578 aa19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 NME3Q13232 169 aa19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 ZC3H12AQ5D1E8 599 aaKnown RBP19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 C10orf76Q5T2E6 689 aa19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 PPP1R2P3Q6NXS1 205 aa19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 ZC3H14Q6PJT7 736 aaKnown RBP19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 SND1Q7KZF4 910 aaKnown RBP eCLIP19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 ATP6V0D2Q8N8Y2 350 aa19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 TERB1Q8NA31 727 aa19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 AZIN2Q96A70 460 aa19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 SLC39A13Q96H72 371 aa19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 PCDHB18PQ96TA0 734 aa19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 FAM86C1Q9NVL1 165 aa19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 ADAM22Q9P0K1 906 aa19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 STOML2Q9UJZ1 356 aa19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 KIAA1549LQ6ZVL6 1849 aa19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 A0A1W2PQJ5 194 aa19.19■□□□□ 0.66
PRPF40B-216ENST00000552301 M0QYT0 321 aa19.19■□□□□ 0.66
PRPF40B-216ENST00000552301 SP9P0CG40 484 aa19.19■□□□□ 0.66
PRPF40B-216ENST00000552301 ABCB4P21439 1286 aa19.19■□□□□ 0.66
PRPF40B-216ENST00000552301 CCR1P32246 355 aa19.19■□□□□ 0.66
PRPF40B-216ENST00000552301 PITX1P78337 314 aaPredicted RBP19.19■□□□□ 0.66
PRPF40B-216ENST00000552301 NHLH1Q02575 133 aa19.19■□□□□ 0.66
PRPF40B-216ENST00000552301 C2orf27AQ580R0 203 aa19.19■□□□□ 0.66
PRPF40B-216ENST00000552301 FYB2Q5VWT5 728 aa19.19■□□□□ 0.66
PRPF40B-216ENST00000552301 IRF2BP2Q7Z5L9 587 aa19.19■□□□□ 0.66
PRPF40B-216ENST00000552301 EZH1Q92800 747 aaPredicted RBP19.19■□□□□ 0.66
PRPF40B-216ENST00000552301 TMA16Q96EY4 203 aaKnown RBP19.19■□□□□ 0.66
PRPF40B-216ENST00000552301 BTN2A3PQ96KV6 586 aa19.19■□□□□ 0.66
PRPF40B-216ENST00000552301 METTL5Q9NRN9 209 aaKnown RBP19.19■□□□□ 0.66
PRPF40B-216ENST00000552301 AIPL1Q9NZN9 384 aa19.19■□□□□ 0.66
PRPF40B-216ENST00000552301 SLC8A2Q9UPR5 921 aa19.19■□□□□ 0.66
PRPF40B-216ENST00000552301 PAXBP1Q9Y5B6 917 aa19.19■□□□□ 0.66
PRPF40B-216ENST00000552301 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.19■□□□□ 0.66
PRPF40B-216ENST00000552301 CHURC1-FNTBB4DL54 471 aa19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 K7EQS6 105 aa19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 HOXD11P31277 338 aaPredicted RBP19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 TNFRSF4P43489 277 aa19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 MRPS21P82921 87 aaKnown RBP19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 MTA1Q13330 715 aa19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 ZNF528Q3MIS6 628 aa19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 TDRD12Q587J7 1177 aaKnown RBP19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 PKN3Q6P5Z2 889 aa19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 TSSK4Q6SA08 328 aa19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 CHSY1Q86X52 802 aa19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 PHF13Q86YI8 300 aaPredicted RBP19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 CCDC117Q8IWD4 279 aaPredicted RBP19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 MAML2Q8IZL2 1156 aaPredicted RBP19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 PHTF2Q8N3S3 785 aa19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 HJURPQ8NCD3 748 aaPredicted RBP19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 USP33Q8TEY7 942 aa19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 CPLX3Q8WVH0 158 aa19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 IRX2Q9BZI1 471 aaPredicted RBP19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 HAUS4Q9H6D7 363 aa19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 TMEM51Q9NW97 253 aa19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 LUC7L2Q9Y383 392 aaKnown RBP19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 ITIH6Q6UXX5 1313 aa19.18■□□□□ 0.66
PRPF40B-216ENST00000552301 TIE1P35590 1138 aa19.17■□□□□ 0.66
PRPF40B-216ENST00000552301 PRKCIP41743 596 aa19.17■□□□□ 0.66
PRPF40B-216ENST00000552301 NRLP54845 237 aa19.17■□□□□ 0.66
PRPF40B-216ENST00000552301 ZBED6P86452 979 aa19.17■□□□□ 0.66
PRPF40B-216ENST00000552301 C1QBPQ07021 282 aaKnown RBP19.17■□□□□ 0.66
PRPF40B-216ENST00000552301 MESP2Q0VG99 397 aa19.17■□□□□ 0.66
PRPF40B-216ENST00000552301 FAM133BQ5BKY9 247 aaKnown RBP19.17■□□□□ 0.66
PRPF40B-216ENST00000552301 RFWD3Q6PCD5 774 aa19.17■□□□□ 0.66
PRPF40B-216ENST00000552301 TRMT11Q7Z4G4 463 aaKnown RBP19.17■□□□□ 0.66
PRPF40B-216ENST00000552301 PHLDB2Q86SQ0 1253 aa19.17■□□□□ 0.66
PRPF40B-216ENST00000552301 VPS36Q86VN1 386 aa19.17■□□□□ 0.66
PRPF40B-216ENST00000552301 NPY6RQ99463 290 aa19.17■□□□□ 0.66
PRPF40B-216ENST00000552301 SELENOOQ9BVL4 669 aa19.17■□□□□ 0.66
PRPF40B-216ENST00000552301 FAM126AQ9BYI3 521 aaPredicted RBP19.17■□□□□ 0.66
PRPF40B-216ENST00000552301 SLC2A11Q9BYW1 496 aa19.17■□□□□ 0.66
PRPF40B-216ENST00000552301 A0A0A0MRY4 1105 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 GOLGA6L7A0A1B0GV03 622 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 ANKRD62A6NC57 917 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 TRIM24O15164 1050 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 TBL1XO60907 577 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 PAPSS2O95340 614 aaPredicted RBP19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 F9P00740 461 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 TPM1P09493 284 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 HOXD9P28356 352 aaPredicted RBP19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 SLC6A4P31645 630 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 FLT3P36888 993 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 DEUP1Q05D60 604 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 TRIM14Q14142 442 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 SLC25A52Q3SY17 297 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 HSF5Q4G112 596 aaPredicted RBP19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 PIK3R6Q5UE93 754 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 E4F1Q66K89 784 aaPredicted RBP19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 NADSYN1Q6IA69 706 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 ACAD10Q6JQN1 1059 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 DNAJC24Q6P3W2 148 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 ARCQ7LC44 396 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 ANKS1BQ7Z6G8 1248 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 SFTPA1Q8IWL2 248 aa19.16■□□□□ 0.66
PRPF40B-216ENST00000552301 CCDC33Q8N5R6 958 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms