RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 HLA-EP13747 358 aa17.1■□□□□ 0.33
RAB5C-209ENST00000552162 ACSL1P33121 698 aa17.1■□□□□ 0.33
RAB5C-209ENST00000552162 STK4Q13043 487 aa17.1■□□□□ 0.33
RAB5C-209ENST00000552162 CAMK2BQ13554 666 aa17.1■□□□□ 0.33
RAB5C-209ENST00000552162 CAMK2GQ13555 558 aaPredicted RBP17.1■□□□□ 0.33
RAB5C-209ENST00000552162 TEAD4Q15561 434 aa17.1■□□□□ 0.33
RAB5C-209ENST00000552162 C1orf220Q5T0J3 134 aa17.1■□□□□ 0.33
RAB5C-209ENST00000552162 PPP1R26Q5T8A7 1209 aaPredicted RBP17.1■□□□□ 0.33
RAB5C-209ENST00000552162 CEP135Q66GS9 1140 aa17.1■□□□□ 0.33
RAB5C-209ENST00000552162 SLC2A11Q9BYW1 496 aa17.1■□□□□ 0.33
RAB5C-209ENST00000552162 NIF3L1Q9GZT8 377 aa17.1■□□□□ 0.33
RAB5C-209ENST00000552162 KCTD10Q9H3F6 313 aa17.1■□□□□ 0.33
RAB5C-209ENST00000552162 CYP3A43Q9HB55 503 aa17.1■□□□□ 0.33
RAB5C-209ENST00000552162 APOBEC3GQ9HC16 384 aaKnown RBP17.1■□□□□ 0.33
RAB5C-209ENST00000552162 MARCH2Q9P0N8 246 aa17.1■□□□□ 0.33
RAB5C-209ENST00000552162 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.1■□□□□ 0.33
RAB5C-209ENST00000552162 TNFSF14O43557 240 aa17.09■□□□□ 0.33
RAB5C-209ENST00000552162 GRK6P43250 576 aa17.09■□□□□ 0.33
RAB5C-209ENST00000552162 GRIA4P48058 902 aa17.09■□□□□ 0.33
RAB5C-209ENST00000552162 CCT8P50990 548 aa17.09■□□□□ 0.33
RAB5C-209ENST00000552162 CCDC157Q569K6 752 aa17.09■□□□□ 0.33
RAB5C-209ENST00000552162 LAYNQ6UX15 382 aa17.09■□□□□ 0.33
RAB5C-209ENST00000552162 RSRC2Q7L4I2 434 aaKnown RBP17.09■□□□□ 0.33
RAB5C-209ENST00000552162 IGSF8Q969P0 613 aa17.09■□□□□ 0.33
RAB5C-209ENST00000552162 TM9SF3Q9HD45 589 aa17.09■□□□□ 0.33
RAB5C-209ENST00000552162 EXOC1Q9NV70 894 aa17.09■□□□□ 0.33
RAB5C-209ENST00000552162 STRIP2Q9ULQ0 834 aa17.09■□□□□ 0.33
RAB5C-209ENST00000552162 ANKRD6Q9Y2G4 727 aa17.09■□□□□ 0.33
RAB5C-209ENST00000552162 HELZ2Q9BYK8 2649 aaKnown RBP17.09■□□□□ 0.33
RAB5C-209ENST00000552162 A0A087WV48 116 aa17.08■□□□□ 0.32
RAB5C-209ENST00000552162 SLC12A8A0AV02 714 aa17.08■□□□□ 0.32
RAB5C-209ENST00000552162 PDXKO00764 312 aa17.08■□□□□ 0.32
RAB5C-209ENST00000552162 TIMM44O43615 452 aa17.08■□□□□ 0.32
RAB5C-209ENST00000552162 KLRC4O43908 158 aa17.08■□□□□ 0.32
RAB5C-209ENST00000552162 SMAD1Q15797 465 aaKnown RBP17.08■□□□□ 0.32
RAB5C-209ENST00000552162 PTPRNQ16849 979 aa17.08■□□□□ 0.32
RAB5C-209ENST00000552162 FNDC3BQ53EP0 1204 aaKnown RBP17.08■□□□□ 0.32
RAB5C-209ENST00000552162 SCUBE3Q8IX30 993 aa17.08■□□□□ 0.32
RAB5C-209ENST00000552162 FAM217AQ8IXS0 508 aa17.08■□□□□ 0.32
RAB5C-209ENST00000552162 ARHGAP18Q8N392 663 aa17.08■□□□□ 0.32
RAB5C-209ENST00000552162 ZNF366Q8N895 744 aa17.08■□□□□ 0.32
RAB5C-209ENST00000552162 TAS1R2Q8TE23 839 aa17.08■□□□□ 0.32
RAB5C-209ENST00000552162 PLD4Q96BZ4 506 aa17.08■□□□□ 0.32
RAB5C-209ENST00000552162 BIRC7Q96CA5 298 aa17.08■□□□□ 0.32
RAB5C-209ENST00000552162 CRELD1Q96HD1 420 aa17.08■□□□□ 0.32
RAB5C-209ENST00000552162 DNAI2Q9GZS0 605 aa17.08■□□□□ 0.32
RAB5C-209ENST00000552162 OSGEPQ9NPF4 335 aa17.08■□□□□ 0.32
RAB5C-209ENST00000552162 FAM13BQ9NYF5 915 aa17.08■□□□□ 0.32
RAB5C-209ENST00000552162 FRMD4BQ9Y2L6 1034 aa17.08■□□□□ 0.32
RAB5C-209ENST00000552162 KCNK3O14649 394 aa17.07■□□□□ 0.32
RAB5C-209ENST00000552162 PCDHGA12O60330 932 aa17.07■□□□□ 0.32
RAB5C-209ENST00000552162 SEMA4FO95754 770 aa17.07■□□□□ 0.32
RAB5C-209ENST00000552162 HOXD9P28356 352 aaPredicted RBP17.07■□□□□ 0.32
RAB5C-209ENST00000552162 GCLMP48507 274 aa17.07■□□□□ 0.32
RAB5C-209ENST00000552162 VAMP7P51809 220 aa17.07■□□□□ 0.32
RAB5C-209ENST00000552162 YWHAGP61981 247 aaKnown RBP eCLIP17.07■□□□□ 0.32
RAB5C-209ENST00000552162 MPPE1Q53F39 396 aa17.07■□□□□ 0.32
RAB5C-209ENST00000552162 ZNF394Q53GI3 561 aa17.07■□□□□ 0.32
RAB5C-209ENST00000552162 CEP57L1Q8IYX8 460 aa17.07■□□□□ 0.32
RAB5C-209ENST00000552162 PDCD7Q8N8D1 485 aaKnown RBP17.07■□□□□ 0.32
RAB5C-209ENST00000552162 ENGASEQ8NFI3 743 aa17.07■□□□□ 0.32
RAB5C-209ENST00000552162 CYB5D2Q8WUJ1 264 aa17.07■□□□□ 0.32
RAB5C-209ENST00000552162 ARID3AQ99856 593 aa17.07■□□□□ 0.32
RAB5C-209ENST00000552162 BTBD1Q9H0C5 482 aa17.07■□□□□ 0.32
RAB5C-209ENST00000552162 TMEM245Q9H330 911 aa17.07■□□□□ 0.32
RAB5C-209ENST00000552162 PLXNA2O75051 1894 aa17.06■□□□□ 0.32
RAB5C-209ENST00000552162 H0Y8X5 98 aa17.06■□□□□ 0.32
RAB5C-209ENST00000552162 FSBPO95073 299 aa17.06■□□□□ 0.32
RAB5C-209ENST00000552162 TRIM49P0CI25 452 aa17.06■□□□□ 0.32
RAB5C-209ENST00000552162 TRIM49CP0CI26 452 aa17.06■□□□□ 0.32
RAB5C-209ENST00000552162 C7P10643 843 aa17.06■□□□□ 0.32
RAB5C-209ENST00000552162 HLA-FP30511 346 aa17.06■□□□□ 0.32
RAB5C-209ENST00000552162 IL9RQ01113 521 aa17.06■□□□□ 0.32
RAB5C-209ENST00000552162 INAVAQ3KP66 663 aa17.06■□□□□ 0.32
RAB5C-209ENST00000552162 KMT5BQ4FZB7 885 aa17.06■□□□□ 0.32
RAB5C-209ENST00000552162 RESP18Q5W5W9 173 aa17.06■□□□□ 0.32
RAB5C-209ENST00000552162 DHRS13Q6UX07 377 aa17.06■□□□□ 0.32
RAB5C-209ENST00000552162 CHST9Q7L1S5 443 aa17.06■□□□□ 0.32
RAB5C-209ENST00000552162 ADAT2Q7Z6V5 191 aaKnown RBP17.06■□□□□ 0.32
RAB5C-209ENST00000552162 WFIKKN2Q8TEU8 576 aa17.06■□□□□ 0.32
RAB5C-209ENST00000552162 HEXIM2Q96MH2 286 aaKnown RBP17.06■□□□□ 0.32
RAB5C-209ENST00000552162 FBRSQ9HAH7 460 aa17.06■□□□□ 0.32
RAB5C-209ENST00000552162 FTSJ1Q9UET6 329 aa17.06■□□□□ 0.32
RAB5C-209ENST00000552162 PLA2G4CQ9UP65 541 aa17.06■□□□□ 0.32
RAB5C-209ENST00000552162 COL5A1P20908 1838 aaPredicted RBP17.05■□□□□ 0.32
RAB5C-209ENST00000552162 KALRNO60229 2985 aa17.05■□□□□ 0.32
RAB5C-209ENST00000552162 MAPK13O15264 365 aa17.05■□□□□ 0.32
RAB5C-209ENST00000552162 TSPAN3O60637 253 aa17.05■□□□□ 0.32
RAB5C-209ENST00000552162 DNTTP04053 509 aa17.05■□□□□ 0.32
RAB5C-209ENST00000552162 CD27P26842 260 aa17.05■□□□□ 0.32
RAB5C-209ENST00000552162 CTSKP43235 329 aa17.05■□□□□ 0.32
RAB5C-209ENST00000552162 ABCG1P45844 678 aa17.05■□□□□ 0.32
RAB5C-209ENST00000552162 ME1P48163 572 aa17.05■□□□□ 0.32
RAB5C-209ENST00000552162 BCAT1P54687 386 aa17.05■□□□□ 0.32
RAB5C-209ENST00000552162 RPS14P62263 151 aaKnown RBP17.05■□□□□ 0.32
RAB5C-209ENST00000552162 ZBTB16Q05516 673 aa17.05■□□□□ 0.32
RAB5C-209ENST00000552162 PPP3CAQ08209 521 aa17.05■□□□□ 0.32
RAB5C-209ENST00000552162 TRIP4Q15650 581 aaPredicted RBP17.05■□□□□ 0.32
RAB5C-209ENST00000552162 TTC31Q49AM3 519 aaPredicted RBP17.05■□□□□ 0.32
RAB5C-209ENST00000552162 RAB41Q5JT25 222 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms