RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 KLF16Q9BXK1 252 aaPredicted RBP16.18■□□□□ 0.18
BRF1-220ENST00000552127 UBXN6Q9BZV1 441 aa16.18■□□□□ 0.18
BRF1-220ENST00000552127 CLMPQ9H6B4 373 aa16.18■□□□□ 0.18
BRF1-220ENST00000552127 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.18■□□□□ 0.18
BRF1-220ENST00000552127 NAGPAQ9UK23 515 aa16.18■□□□□ 0.18
BRF1-220ENST00000552127 TSPAN16Q9UKR8 245 aa16.18■□□□□ 0.18
BRF1-220ENST00000552127 PTPRQQ9UMZ3 2332 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 FAM149AA5PLN7 773 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 ADAM23O75077 832 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 FGFR1OPO95684 399 aaKnown RBP16.17■□□□□ 0.18
BRF1-220ENST00000552127 TBX18O95935 607 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 CD19P15391 556 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 EIF2DP41214 584 aaKnown RBP16.17■□□□□ 0.18
BRF1-220ENST00000552127 GOLGA8FQ08AF8 430 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 GOLGA8DPQ0D2H9 430 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 RAB41Q5JT25 222 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 EOGTQ5NDL2 527 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 C10orf120Q5SQS8 335 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 RHBDF2Q6PJF5 856 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 SLC36A4Q6YBV0 504 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 SCD5Q86SK9 330 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 TADA2BQ86TJ2 420 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 PPM1KQ8N3J5 372 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 GALNT15Q8N3T1 639 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 LMO3Q8TAP4 145 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 FCRL3Q96P31 734 aaPredicted RBP16.17■□□□□ 0.18
BRF1-220ENST00000552127 SRRTQ9BXP5 876 aaKnown RBP16.17■□□□□ 0.18
BRF1-220ENST00000552127 ZDHHC4Q9NPG8 344 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 CLIC5Q9NZA1 410 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 HESX1Q9UBX0 185 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 RWDD2AQ9UIY3 292 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 LSM7Q9UK45 103 aaKnown RBP16.17■□□□□ 0.18
BRF1-220ENST00000552127 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.17■□□□□ 0.18
BRF1-220ENST00000552127 MGAQ8IWI9 3026 aa16.17■□□□□ 0.18
BRF1-220ENST00000552127 MYO18AQ92614 2054 aaKnown RBP16.17■□□□□ 0.18
BRF1-220ENST00000552127 XPO1O14980 1071 aaKnown RBP16.16■□□□□ 0.18
BRF1-220ENST00000552127 MDM4O15151 490 aa16.16■□□□□ 0.18
BRF1-220ENST00000552127 DKK1O94907 266 aa16.16■□□□□ 0.18
BRF1-220ENST00000552127 AFPP02771 609 aaKnown RBP16.16■□□□□ 0.18
BRF1-220ENST00000552127 ATXN1LP0C7T5 689 aaKnown RBP16.16■□□□□ 0.18
BRF1-220ENST00000552127 VDRP11473 427 aa16.16■□□□□ 0.18
BRF1-220ENST00000552127 GAD2Q05329 585 aa16.16■□□□□ 0.18
BRF1-220ENST00000552127 MESP2Q0VG99 397 aa16.16■□□□□ 0.18
BRF1-220ENST00000552127 BST2Q10589 180 aaKnown RBP16.16■□□□□ 0.18
BRF1-220ENST00000552127 KCNH2Q12809 1159 aa16.16■□□□□ 0.18
BRF1-220ENST00000552127 HSF5Q4G112 596 aaPredicted RBP16.16■□□□□ 0.18
BRF1-220ENST00000552127 LY6G5CQ5SRR4 150 aa16.16■□□□□ 0.18
BRF1-220ENST00000552127 EMC10Q5UCC4 262 aa16.16■□□□□ 0.18
BRF1-220ENST00000552127 TMEM270Q6UE05 265 aa16.16■□□□□ 0.18
BRF1-220ENST00000552127 HTR3DQ70Z44 454 aa16.16■□□□□ 0.18
BRF1-220ENST00000552127 C12orf40Q86WS4 652 aa16.16■□□□□ 0.18
BRF1-220ENST00000552127 ARHGAP18Q8N392 663 aa16.16■□□□□ 0.18
BRF1-220ENST00000552127 ZNF276Q8N554 614 aa16.16■□□□□ 0.18
BRF1-220ENST00000552127 PDCD7Q8N8D1 485 aaKnown RBP16.16■□□□□ 0.18
BRF1-220ENST00000552127 CDK5RAP1Q96SZ6 601 aaKnown RBP16.16■□□□□ 0.18
BRF1-220ENST00000552127 PNKPQ96T60 521 aa16.16■□□□□ 0.18
BRF1-220ENST00000552127 CLSTN2Q9H4D0 955 aa16.16■□□□□ 0.18
BRF1-220ENST00000552127 DNMT3LQ9UJW3 386 aa16.16■□□□□ 0.18
BRF1-220ENST00000552127 NUDT5Q9UKK9 219 aa16.16■□□□□ 0.18
BRF1-220ENST00000552127 KIAA1257Q9ULG3 409 aa16.16■□□□□ 0.18
BRF1-220ENST00000552127 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.15■□□□□ 0.18
BRF1-220ENST00000552127 TULP2O00295 520 aa16.15■□□□□ 0.18
BRF1-220ENST00000552127 O00370 1275 aa16.15■□□□□ 0.18
BRF1-220ENST00000552127 HOXC11O43248 304 aaPredicted RBP16.15■□□□□ 0.18
BRF1-220ENST00000552127 GREM1O60565 184 aa16.15■□□□□ 0.18
BRF1-220ENST00000552127 PAEPP09466 180 aa16.15■□□□□ 0.18
BRF1-220ENST00000552127 SETSIPP0DME0 302 aa16.15■□□□□ 0.18
BRF1-220ENST00000552127 RALAP11233 206 aa16.15■□□□□ 0.18
BRF1-220ENST00000552127 SLC6A11P48066 632 aa16.15■□□□□ 0.18
BRF1-220ENST00000552127 TKTL1P51854 596 aa16.15■□□□□ 0.18
BRF1-220ENST00000552127 GCNT1Q02742 428 aa16.15■□□□□ 0.18
BRF1-220ENST00000552127 KDSRQ06136 332 aa16.15■□□□□ 0.18
BRF1-220ENST00000552127 PDE4CQ08493 712 aa16.15■□□□□ 0.18
BRF1-220ENST00000552127 GRIK2Q13002 908 aa16.15■□□□□ 0.18
BRF1-220ENST00000552127 PCSK4Q6UW60 755 aa16.15■□□□□ 0.18
BRF1-220ENST00000552127 ARHGEF19Q8IW93 802 aa16.15■□□□□ 0.18
BRF1-220ENST00000552127 KAT5Q92993 513 aa16.15■□□□□ 0.18
BRF1-220ENST00000552127 HSPA12BQ96MM6 686 aa16.15■□□□□ 0.18
BRF1-220ENST00000552127 INTS2Q9H0H0 1204 aaKnown RBP16.15■□□□□ 0.18
BRF1-220ENST00000552127 PIEZO2Q9H5I5 2752 aa16.15■□□□□ 0.18
BRF1-220ENST00000552127 SPHK2Q9NRA0 654 aa16.15■□□□□ 0.18
BRF1-220ENST00000552127 PCDHB4Q9Y5E5 795 aa16.15■□□□□ 0.18
BRF1-220ENST00000552127 IGHV1OR15-9A0A0B4J2B8 117 aa16.14■□□□□ 0.17
BRF1-220ENST00000552127 GOLGA8CPA6NN73 597 aa16.14■□□□□ 0.17
BRF1-220ENST00000552127 PYCARD-AS1I3L0S3 204 aa16.14■□□□□ 0.17
BRF1-220ENST00000552127 KAT7O95251 611 aa16.14■□□□□ 0.17
BRF1-220ENST00000552127 APODP05090 189 aa16.14■□□□□ 0.17
BRF1-220ENST00000552127 KIR2DL1P43626 348 aaPredicted RBP16.14■□□□□ 0.17
BRF1-220ENST00000552127 PLA2G4AP47712 749 aa16.14■□□□□ 0.17
BRF1-220ENST00000552127 BTBD8Q5XKL5 378 aa16.14■□□□□ 0.17
BRF1-220ENST00000552127 RRAGAQ7L523 313 aa16.14■□□□□ 0.17
BRF1-220ENST00000552127 MIB1Q86YT6 1006 aa16.14■□□□□ 0.17
BRF1-220ENST00000552127 ETFBKMTQ8IXQ9 262 aa16.14■□□□□ 0.17
BRF1-220ENST00000552127 RGL4Q8IZJ4 473 aa16.14■□□□□ 0.17
BRF1-220ENST00000552127 PHTF2Q8N3S3 785 aa16.14■□□□□ 0.17
BRF1-220ENST00000552127 RBBP8NLQ8NC74 664 aaPredicted RBP16.14■□□□□ 0.17
BRF1-220ENST00000552127 EHBP1Q8NDI1 1231 aa16.14■□□□□ 0.17
BRF1-220ENST00000552127 BAHD1Q8TBE0 780 aaPredicted RBP16.14■□□□□ 0.17
BRF1-220ENST00000552127 ULBP1Q9BZM6 244 aa16.14■□□□□ 0.17
BRF1-220ENST00000552127 PRDM16Q9HAZ2 1276 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms