RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 ADAM32Q8TC27 787 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 CLDN23Q96B33 292 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 TMA16Q96EY4 203 aaKnown RBP11.05□□□□□ -0.64
PTCH1-225ENST00000551845 PIWIL1Q96J94 861 aaKnown RBP11.05□□□□□ -0.64
PTCH1-225ENST00000551845 VCPIP1Q96JH7 1222 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 PNKPQ96T60 521 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 C11orf70Q9BRQ4 267 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 BBS2Q9BXC9 721 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 CACNA1BQ00975 2339 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 GVINP1Q7Z2Y8 2422 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 PTPRDP23468 1912 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 SYNJ2BP-COX16A0A087WUM0 186 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 SIGLEC16A6NMB1 481 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 TMCO5BA8MYB1 307 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 M0QYT0 321 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 HOXC11O43248 304 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-225ENST00000551845 ACSL4O60488 711 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 DAB1O75553 588 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 IGLV3-27P01718 113 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 APOEP02649 317 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 SP9P0CG40 484 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 ABCB4P21439 1286 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 CCR1P32246 355 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 EIF2DP41214 584 aaKnown RBP11.04□□□□□ -0.64
PTCH1-225ENST00000551845 RPS9P46781 194 aaKnown RBP11.04□□□□□ -0.64
PTCH1-225ENST00000551845 SLC6A11P48066 632 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 NME3Q13232 169 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 FZD5Q13467 585 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 ST3GAL2Q16842 350 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 SLC25A52Q3SY17 297 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 FBXO43Q4G163 708 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 MPPE1Q53F39 396 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 TDRD12Q587J7 1177 aaKnown RBP11.04□□□□□ -0.64
PTCH1-225ENST00000551845 ZC3H12AQ5D1E8 599 aaKnown RBP11.04□□□□□ -0.64
PTCH1-225ENST00000551845 SND1Q7KZF4 910 aaKnown RBP eCLIP11.04□□□□□ -0.64
PTCH1-225ENST00000551845 PHLDB2Q86SQ0 1253 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 TAC4Q86UU9 113 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 MCOLN2Q8IZK6 566 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 NAT16Q8N8M0 369 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 ATP6V0D2Q8N8Y2 350 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 DDI1Q8WTU0 396 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 CHFRQ96EP1 664 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 SLC39A13Q96H72 371 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 SYT11Q9BT88 431 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 SELENOOQ9BVL4 669 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 IRX2Q9BZI1 471 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-225ENST00000551845 WDCPQ9H6R7 721 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 FAM204AQ9H8W3 233 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 FBRSL1Q9HCM7 1045 aaKnown RBP11.04□□□□□ -0.64
PTCH1-225ENST00000551845 DDIT4Q9NX09 232 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 MARK1Q9P0L2 795 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 COX16Q9P0S2 106 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 DEC1Q9P2X7 70 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 NCDNQ9UBB6 729 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 ADAMTS1Q9UHI8 967 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 STOML2Q9UJZ1 356 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 TMEM59LQ9UK28 342 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 FARP1Q9Y4F1 1045 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-225ENST00000551845 PAXBP1Q9Y5B6 917 aa11.04□□□□□ -0.64
PTCH1-225ENST00000551845 VPS13AQ96RL7 3174 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 A0A0A0MRY4 1105 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 ANKRD62A6NC57 917 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 TBC1D3BA6NDS4 549 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 NEDD8-MDP1E9PL57 170 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 DDX3XO00571 662 aaKnown RBP eCLIP11.03□□□□□ -0.64
PTCH1-225ENST00000551845 IRAK2O43187 625 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 ATG13O75143 517 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 RTN2O75298 545 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 IGLV3-25P01717 112 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 FTLP02792 175 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-225ENST00000551845 APODP05090 189 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 TYRP14679 529 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 PDGFRAP16234 1089 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 SDHBP21912 280 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 HNRNPH3P31942 346 aaKnown RBP11.03□□□□□ -0.64
PTCH1-225ENST00000551845 OPRD1P41143 372 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 GRIA2P42262 883 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 SULT1E1P49888 294 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 DEUP1Q05D60 604 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 PTP4A2Q12974 167 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 EIF4EBP2Q13542 120 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-225ENST00000551845 E4F1Q66K89 784 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-225ENST00000551845 HGSNATQ68CP4 663 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 FSTL4Q6MZW2 842 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 ZNF687Q8N1G0 1237 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 NT5C3BQ969T7 300 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 BTN2A3PQ96KV6 586 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 FCRL2Q96LA5 508 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-225ENST00000551845 NPY6RQ99463 290 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 ARHGEF4Q9NR80 690 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 METTL5Q9NRN9 209 aaKnown RBP11.03□□□□□ -0.64
PTCH1-225ENST00000551845 DLGAP2Q9P1A6 1054 aa11.03□□□□□ -0.64
PTCH1-225ENST00000551845 GOLGA6L7A0A1B0GV03 622 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 TYW5A2RUC4 315 aaKnown RBP11.02□□□□□ -0.65
PTCH1-225ENST00000551845 KCNU1A8MYU2 1149 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 AKR1B15C9JRZ8 316 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-225ENST00000551845 AP5Z1O43299 807 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 TSPAN3O60637 253 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 TULP3O75386 442 aa11.02□□□□□ -0.65
PTCH1-225ENST00000551845 MOCS2O96007 188 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms