RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 SCML1Q9UN30 329 aa16.05■□□□□ 0.16
CACNB3-220ENST00000551716 COL5A1P20908 1838 aaPredicted RBP16.05■□□□□ 0.16
CACNB3-220ENST00000551716 MGAQ8IWI9 3026 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 A0A1W2PPC4 97 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 KLKB1P03952 638 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 P4HA1P13674 534 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 CLDN6P56747 220 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 RPS14P62263 151 aaKnown RBP16.04■□□□□ 0.16
CACNB3-220ENST00000551716 SNRPFP62306 86 aaKnown RBP16.04■□□□□ 0.16
CACNB3-220ENST00000551716 FNDC3BQ53EP0 1204 aaKnown RBP16.04■□□□□ 0.16
CACNB3-220ENST00000551716 ZNF667Q5HYK9 610 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 USP30Q70CQ3 517 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 ACOT1Q86TX2 421 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 FMNL3Q8IVF7 1028 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 CCDC65Q8IXS2 484 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 CRYBG2Q8N1P7 616 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 CPXM2Q8N436 756 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 OXR1Q8N573 874 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 DCBLD1Q8N8Z6 715 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 SLC2A14Q8TDB8 520 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 DDI1Q8WTU0 396 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 ORAI3Q9BRQ5 295 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 TMEM245Q9H330 911 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 PNPLA8Q9NP80 782 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 CLIC5Q9NZA1 410 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 SUN2Q9UH99 717 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 ADAMTS1Q9UHI8 967 aa16.04■□□□□ 0.16
CACNB3-220ENST00000551716 TPX2Q9ULW0 747 aaKnown RBP16.04■□□□□ 0.16
CACNB3-220ENST00000551716 MUC22E2RYF6 1773 aaPredicted RBP16.03■□□□□ 0.16
CACNB3-220ENST00000551716 A0A1W2PQH9 124 aa16.03■□□□□ 0.16
CACNB3-220ENST00000551716 CYP26A1O43174 497 aa16.03■□□□□ 0.16
CACNB3-220ENST00000551716 BEST1O76090 585 aa16.03■□□□□ 0.16
CACNB3-220ENST00000551716 FAM200BP0CF97 657 aa16.03■□□□□ 0.16
CACNB3-220ENST00000551716 CSRP3P50461 194 aa16.03■□□□□ 0.16
CACNB3-220ENST00000551716 AP3M2P53677 418 aa16.03■□□□□ 0.16
CACNB3-220ENST00000551716 SLC45A4Q5BKX6 768 aa16.03■□□□□ 0.16
CACNB3-220ENST00000551716 CCDC73Q6ZRK6 1079 aa16.03■□□□□ 0.16
CACNB3-220ENST00000551716 UNC93AQ86WB7 457 aa16.03■□□□□ 0.16
CACNB3-220ENST00000551716 RDH13Q8NBN7 331 aa16.03■□□□□ 0.16
CACNB3-220ENST00000551716 WFIKKN2Q8TEU8 576 aa16.03■□□□□ 0.16
CACNB3-220ENST00000551716 SORCS1Q8WY21 1168 aa16.03■□□□□ 0.16
CACNB3-220ENST00000551716 MED8Q96G25 268 aa16.03■□□□□ 0.16
CACNB3-220ENST00000551716 DPH1Q9BZG8 443 aa16.03■□□□□ 0.16
CACNB3-220ENST00000551716 ERVMER34-1Q9H9K5 563 aa16.03■□□□□ 0.16
CACNB3-220ENST00000551716 NAGPAQ9UK23 515 aa16.03■□□□□ 0.16
CACNB3-220ENST00000551716 CBX4O00257 560 aa16.02■□□□□ 0.16
CACNB3-220ENST00000551716 MDM4O15151 490 aa16.02■□□□□ 0.16
CACNB3-220ENST00000551716 SLC28A2O43868 658 aa16.02■□□□□ 0.16
CACNB3-220ENST00000551716 CLSTN1O94985 981 aa16.02■□□□□ 0.16
CACNB3-220ENST00000551716 IGHV4-34P06331 123 aa16.02■□□□□ 0.16
CACNB3-220ENST00000551716 CCDC130P13994 396 aa16.02■□□□□ 0.16
CACNB3-220ENST00000551716 CD38P28907 300 aa16.02■□□□□ 0.16
CACNB3-220ENST00000551716 CORO1AP31146 461 aaKnown RBP16.02■□□□□ 0.16
CACNB3-220ENST00000551716 RXRGP48443 463 aa16.02■□□□□ 0.16
CACNB3-220ENST00000551716 CYP24A1Q07973 514 aa16.02■□□□□ 0.16
CACNB3-220ENST00000551716 SHBQ15464 509 aa16.02■□□□□ 0.16
CACNB3-220ENST00000551716 ZNF699Q32M78 642 aa16.02■□□□□ 0.16
CACNB3-220ENST00000551716 PRAMEF14Q5SWL7 426 aa16.02■□□□□ 0.16
CACNB3-220ENST00000551716 ARHGAP40Q5TG30 622 aa16.02■□□□□ 0.16
CACNB3-220ENST00000551716 TMEM215Q68D42 235 aa16.02■□□□□ 0.16
CACNB3-220ENST00000551716 BRAPQ7Z569 592 aa16.02■□□□□ 0.16
CACNB3-220ENST00000551716 DHX40Q8IX18 779 aaKnown RBP16.02■□□□□ 0.16
CACNB3-220ENST00000551716 GANCQ8TET4 914 aa16.02■□□□□ 0.16
CACNB3-220ENST00000551716 SNRNP27Q8WVK2 155 aaKnown RBP16.02■□□□□ 0.16
CACNB3-220ENST00000551716 P2RY11Q96G91 374 aa16.02■□□□□ 0.16
CACNB3-220ENST00000551716 SMYD3Q9H7B4 428 aa16.02■□□□□ 0.16
CACNB3-220ENST00000551716 NMUR1Q9HB89 426 aa16.02■□□□□ 0.16
CACNB3-220ENST00000551716 PRSS16Q9NQE7 514 aa16.02■□□□□ 0.16
CACNB3-220ENST00000551716 NUDT5Q9UKK9 219 aa16.02■□□□□ 0.16
CACNB3-220ENST00000551716 AGO1Q9UL18 857 aaKnown RBP16.02■□□□□ 0.16
CACNB3-220ENST00000551716 LRRC72A6NJI9 287 aa16.01■□□□□ 0.15
CACNB3-220ENST00000551716 STX6O43752 255 aa16.01■□□□□ 0.15
CACNB3-220ENST00000551716 RNASEH1O60930 286 aaKnown RBP16.01■□□□□ 0.15
CACNB3-220ENST00000551716 ATP5BP06576 529 aaKnown RBP16.01■□□□□ 0.15
CACNB3-220ENST00000551716 ACP1P24666 158 aa16.01■□□□□ 0.15
CACNB3-220ENST00000551716 EPHA8P29322 1005 aaPredicted RBP16.01■□□□□ 0.15
CACNB3-220ENST00000551716 ZNF445P59923 1031 aa16.01■□□□□ 0.15
CACNB3-220ENST00000551716 ERVPABLB-1P60509 514 aa16.01■□□□□ 0.15
CACNB3-220ENST00000551716 MPPE1Q53F39 396 aa16.01■□□□□ 0.15
CACNB3-220ENST00000551716 ZNF776Q68DI1 518 aaPredicted RBP16.01■□□□□ 0.15
CACNB3-220ENST00000551716 CCDC186Q7Z3E2 898 aa16.01■□□□□ 0.15
CACNB3-220ENST00000551716 LURAP1LQ8IV03 231 aa16.01■□□□□ 0.15
CACNB3-220ENST00000551716 DENND1CQ8IV53 801 aa16.01■□□□□ 0.15
CACNB3-220ENST00000551716 XXYLT1Q8NBI6 393 aa16.01■□□□□ 0.15
CACNB3-220ENST00000551716 ZNF516Q92618 1163 aa16.01■□□□□ 0.15
CACNB3-220ENST00000551716 HIC2Q96JB3 615 aa16.01■□□□□ 0.15
CACNB3-220ENST00000551716 SLC6A18Q96N87 628 aa16.01■□□□□ 0.15
CACNB3-220ENST00000551716 HNRNPABQ99729 332 aaKnown RBP16.01■□□□□ 0.15
CACNB3-220ENST00000551716 FGFBP2Q9BYJ0 223 aa16.01■□□□□ 0.15
CACNB3-220ENST00000551716 LRRC27Q9C0I9 530 aa16.01■□□□□ 0.15
CACNB3-220ENST00000551716 DNAI2Q9GZS0 605 aa16.01■□□□□ 0.15
CACNB3-220ENST00000551716 AASDHPPTQ9NRN7 309 aa16.01■□□□□ 0.15
CACNB3-220ENST00000551716 STRIP2Q9ULQ0 834 aa16.01■□□□□ 0.15
CACNB3-220ENST00000551716 ATMQ13315 3056 aa16■□□□□ 0.15
CACNB3-220ENST00000551716 EIF3DO15371 548 aaKnown RBP eCLIP16■□□□□ 0.15
CACNB3-220ENST00000551716 MT-CO3P00414 261 aa16■□□□□ 0.15
CACNB3-220ENST00000551716 NTRK1P04629 796 aa16■□□□□ 0.15
CACNB3-220ENST00000551716 KIF11P52732 1056 aa16■□□□□ 0.15
CACNB3-220ENST00000551716 INSM1Q01101 510 aaPredicted RBP16■□□□□ 0.15
CACNB3-220ENST00000551716 VAC14Q08AM6 782 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms