RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 GRIN1Q05586 938 aa15.17■□□□□ 0.02
VPS29-209ENST00000551655 GOLGA8FQ08AF8 430 aa15.17■□□□□ 0.02
VPS29-209ENST00000551655 GOLGA8DPQ0D2H9 430 aa15.17■□□□□ 0.02
VPS29-209ENST00000551655 WDR72Q3MJ13 1102 aa15.17■□□□□ 0.02
VPS29-209ENST00000551655 FNDC3BQ53EP0 1204 aaKnown RBP15.17■□□□□ 0.02
VPS29-209ENST00000551655 INO80CQ6PI98 192 aaPredicted RBP15.17■□□□□ 0.02
VPS29-209ENST00000551655 CBWD2Q8IUF1 395 aa15.17■□□□□ 0.02
VPS29-209ENST00000551655 CACTIN-AS1Q8N1I8 211 aa15.17■□□□□ 0.02
VPS29-209ENST00000551655 JAKMIP2Q96AA8 810 aa15.17■□□□□ 0.02
VPS29-209ENST00000551655 CALML4Q96GE6 196 aa15.17■□□□□ 0.02
VPS29-209ENST00000551655 SMYD3Q9H7B4 428 aa15.17■□□□□ 0.02
VPS29-209ENST00000551655 CAAP1Q9H8G2 361 aa15.17■□□□□ 0.02
VPS29-209ENST00000551655 CYLDQ9NQC7 956 aa15.17■□□□□ 0.02
VPS29-209ENST00000551655 PRSS16Q9NQE7 514 aa15.17■□□□□ 0.02
VPS29-209ENST00000551655 GDF3Q9NR23 364 aa15.17■□□□□ 0.02
VPS29-209ENST00000551655 TLR8Q9NR97 1041 aaKnown RBP15.17■□□□□ 0.02
VPS29-209ENST00000551655 LRRK2Q5S007 2527 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 A0A1W2PQH9 124 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 USP12O75317 370 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 PRPF6O94906 941 aaKnown RBP15.16■□□□□ 0.02
VPS29-209ENST00000551655 GCNT3O95395 438 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 DNTTP04053 509 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 CCDC130P13994 396 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 ACP1P24666 158 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 TNNC1P63316 161 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 ARID5AQ03989 594 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 KCNJ12Q14500 433 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 DUOXA2Q1HG44 320 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 PROX2Q3B8N5 592 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 NCEH1Q6PIU2 408 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 TRAPPC11Q7Z392 1133 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 SYCP3Q8IZU3 236 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 FUKQ8N0W3 1084 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 GPD1LQ8N335 351 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 FAM184AQ8NB25 1140 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 SMARCD1Q96GM5 515 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 GZF1Q9H116 711 aaPredicted RBP15.16■□□□□ 0.02
VPS29-209ENST00000551655 TMEM245Q9H330 911 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 SGK2Q9HBY8 427 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 EXOC7Q9UPT5 735 aa15.16■□□□□ 0.02
VPS29-209ENST00000551655 AHCTF1Q8WYP5 2266 aa15.15■□□□□ 0.02
VPS29-209ENST00000551655 TRIM38O00635 465 aa15.15■□□□□ 0.02
VPS29-209ENST00000551655 SIGLEC6O43699 453 aa15.15■□□□□ 0.02
VPS29-209ENST00000551655 RARGP13631 454 aa15.15■□□□□ 0.02
VPS29-209ENST00000551655 CD38P28907 300 aa15.15■□□□□ 0.02
VPS29-209ENST00000551655 UBA7P41226 1012 aa15.15■□□□□ 0.02
VPS29-209ENST00000551655 ARRB1P49407 418 aaPredicted RBP15.15■□□□□ 0.02
VPS29-209ENST00000551655 GALCP54803 685 aa15.15■□□□□ 0.02
VPS29-209ENST00000551655 MAP3K7CLP57077 242 aa15.15■□□□□ 0.02
VPS29-209ENST00000551655 NXPH1P58417 271 aa15.15■□□□□ 0.02
VPS29-209ENST00000551655 EIF4HQ15056 248 aaKnown RBP15.15■□□□□ 0.02
VPS29-209ENST00000551655 C10orf120Q5SQS8 335 aa15.15■□□□□ 0.02
VPS29-209ENST00000551655 ZNF574Q6ZN55 896 aaPredicted RBP15.15■□□□□ 0.02
VPS29-209ENST00000551655 SPATS2Q86XZ4 545 aaKnown RBP15.15■□□□□ 0.02
VPS29-209ENST00000551655 ZC3H3Q8IXZ2 948 aaKnown RBP15.15■□□□□ 0.02
VPS29-209ENST00000551655 RASSF8Q8NHQ8 419 aa15.15■□□□□ 0.02
VPS29-209ENST00000551655 GANCQ8TET4 914 aa15.15■□□□□ 0.02
VPS29-209ENST00000551655 LARP4BQ92615 738 aaKnown RBP15.15■□□□□ 0.02
VPS29-209ENST00000551655 SSUH2Q9Y2M2 353 aa15.15■□□□□ 0.02
VPS29-209ENST00000551655 ATP8B3O60423 1300 aa15.15■□□□□ 0.02
VPS29-209ENST00000551655 SPTAN1Q13813 2472 aaKnown RBP15.14■□□□□ 0.01
VPS29-209ENST00000551655 A0A1W2PNU3 283 aaPredicted RBP15.14■□□□□ 0.01
VPS29-209ENST00000551655 PMS2P1A4D2B8 440 aa15.14■□□□□ 0.01
VPS29-209ENST00000551655 YKT6O15498 198 aa15.14■□□□□ 0.01
VPS29-209ENST00000551655 DXOO77932 396 aaKnown RBP15.14■□□□□ 0.01
VPS29-209ENST00000551655 GP1BBP13224 206 aa15.14■□□□□ 0.01
VPS29-209ENST00000551655 CORO1AP31146 461 aaKnown RBP15.14■□□□□ 0.01
VPS29-209ENST00000551655 PLA2G4AP47712 749 aa15.14■□□□□ 0.01
VPS29-209ENST00000551655 ANAPC15P60006 121 aa15.14■□□□□ 0.01
VPS29-209ENST00000551655 LINC00303Q3SY05 128 aa15.14■□□□□ 0.01
VPS29-209ENST00000551655 TTC31Q49AM3 519 aaPredicted RBP15.14■□□□□ 0.01
VPS29-209ENST00000551655 SCARA5Q6ZMJ2 495 aa15.14■□□□□ 0.01
VPS29-209ENST00000551655 ATG14Q6ZNE5 492 aa15.14■□□□□ 0.01
VPS29-209ENST00000551655 DPH1Q9BZG8 443 aa15.14■□□□□ 0.01
VPS29-209ENST00000551655 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.14■□□□□ 0.01
VPS29-209ENST00000551655 COMMD8Q9NX08 183 aa15.14■□□□□ 0.01
VPS29-209ENST00000551655 AGO1Q9UL18 857 aaKnown RBP15.14■□□□□ 0.01
VPS29-209ENST00000551655 CSO75390 466 aaKnown RBP15.13■□□□□ 0.01
VPS29-209ENST00000551655 DLATP10515 647 aaKnown RBP15.13■□□□□ 0.01
VPS29-209ENST00000551655 C7P10643 843 aa15.13■□□□□ 0.01
VPS29-209ENST00000551655 LSSP48449 732 aa15.13■□□□□ 0.01
VPS29-209ENST00000551655 ERVPABLB-1P60509 514 aa15.13■□□□□ 0.01
VPS29-209ENST00000551655 MYL6P60660 151 aa15.13■□□□□ 0.01
VPS29-209ENST00000551655 CDCP2Q5VXM1 449 aa15.13■□□□□ 0.01
VPS29-209ENST00000551655 CCDC81Q6ZN84 652 aa15.13■□□□□ 0.01
VPS29-209ENST00000551655 ACOT1Q86TX2 421 aa15.13■□□□□ 0.01
VPS29-209ENST00000551655 WDR49Q8IV35 697 aa15.13■□□□□ 0.01
VPS29-209ENST00000551655 SLC2A14Q8TDB8 520 aa15.13■□□□□ 0.01
VPS29-209ENST00000551655 DDI1Q8WTU0 396 aa15.13■□□□□ 0.01
VPS29-209ENST00000551655 SDCBP2Q9H190 292 aa15.13■□□□□ 0.01
VPS29-209ENST00000551655 FBXO44Q9H4M3 255 aa15.13■□□□□ 0.01
VPS29-209ENST00000551655 POLR1BQ9H9Y6 1135 aa15.13■□□□□ 0.01
VPS29-209ENST00000551655 FBXL12Q9NXK8 326 aa15.13■□□□□ 0.01
VPS29-209ENST00000551655 RASAL2Q9UJF2 1139 aa15.13■□□□□ 0.01
VPS29-209ENST00000551655 TLN1Q9Y490 2541 aaKnown RBP15.13■□□□□ 0.01
VPS29-209ENST00000551655 COL27A1Q8IZC6 1860 aaPredicted RBP15.12■□□□□ 0.01
VPS29-209ENST00000551655 A0A1W2PP55 124 aa15.12■□□□□ 0.01
VPS29-209ENST00000551655 TLR4O00206 839 aa15.12■□□□□ 0.01
VPS29-209ENST00000551655 HLA-FP30511 346 aa15.12■□□□□ 0.01
VPS29-209ENST00000551655 DAB2P98082 770 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms