RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 TPMTP51580 245 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 COPAP53621 1224 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 FAM193AP78312 1265 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 ADIGQ0VDE8 80 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 BST2Q10589 180 aaKnown RBP11.35□□□□□ -0.59
PFDN5-210ENST00000550513 SLC14A1Q13336 389 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 SGO2Q562F6 1265 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 DCAF12L1Q5VU92 463 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 TMPRSS6Q8IU80 811 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 FMNL3Q8IVF7 1028 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 CADM4Q8NFZ8 388 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 SIPA1Q96FS4 1042 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 IPO9Q96P70 1041 aaKnown RBP11.35□□□□□ -0.59
PFDN5-210ENST00000550513 SLC2A11Q9BYW1 496 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 UBXN6Q9BZV1 441 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 ZDHHC5Q9C0B5 715 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 MIR1-1HGQ9H1L0 117 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 LRRC4Q9HBW1 653 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 ITM2CQ9NQX7 267 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 ELOVL2Q9NXB9 296 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 HESX1Q9UBX0 185 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 CLEC4EQ9ULY5 219 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 ZDHHC9Q9Y397 364 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 NFE2L3Q9Y4A8 694 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 PCDHB9Q9Y5E1 797 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 ATP6V1DQ9Y5K8 247 aa11.35□□□□□ -0.59
PFDN5-210ENST00000550513 COL5A1P20908 1838 aaPredicted RBP11.35□□□□□ -0.59
PFDN5-210ENST00000550513 FREM2Q5SZK8 3169 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 ZFYVE26Q68DK2 2539 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 SRRM3A6NNA2 597 aaPredicted RBP11.34□□□□□ -0.59
PFDN5-210ENST00000550513 TULP2O00295 520 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 SLC16A3O15427 465 aaKnown RBP11.34□□□□□ -0.59
PFDN5-210ENST00000550513 SH3BP5O60239 455 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 ZNF202O95125 648 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 CER1O95813 267 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 IGLV3-19P01714 112 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 CD19P15391 556 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 HOXD9P28356 352 aaPredicted RBP11.34□□□□□ -0.59
PFDN5-210ENST00000550513 OXTRP30559 389 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 HARS2P49590 506 aaKnown RBP11.34□□□□□ -0.59
PFDN5-210ENST00000550513 ZNF445P59923 1031 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 MCCD1P59942 119 aaPredicted RBP11.34□□□□□ -0.59
PFDN5-210ENST00000550513 YWHAEP62258 255 aaKnown RBP11.34□□□□□ -0.59
PFDN5-210ENST00000550513 PDE4CQ08493 712 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 CUL2Q13617 745 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 TRIP4Q15650 581 aaPredicted RBP11.34□□□□□ -0.59
PFDN5-210ENST00000550513 CBWD6Q4V339 395 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 MPPE1Q53F39 396 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 CBWD3Q5JTY5 395 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 CBWD5Q5RIA9 395 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 TMEM215Q68D42 235 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 PM20D1Q6GTS8 502 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 BHLHA9Q7RTU4 235 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 SIX6OS1Q8N1H7 587 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 RBBP8NLQ8NC74 664 aaPredicted RBP11.34□□□□□ -0.59
PFDN5-210ENST00000550513 RNF139Q8WU17 664 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 SORCS1Q8WY21 1168 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 DNASE2BQ8WZ79 361 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 TATDN2Q93075 761 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 CAMK1GQ96NX5 476 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 TSG101Q99816 390 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 RMND1Q9NWS8 449 aa11.34□□□□□ -0.59
PFDN5-210ENST00000550513 HBS1LQ9Y450 684 aaKnown RBP11.34□□□□□ -0.59
PFDN5-210ENST00000550513 FTH1P19P0C7X4 201 aa11.33□□□□□ -0.6
PFDN5-210ENST00000550513 SETSIPP0DME0 302 aa11.33□□□□□ -0.6
PFDN5-210ENST00000550513 HLA-EP13747 358 aa11.33□□□□□ -0.6
PFDN5-210ENST00000550513 HLA-FP30511 346 aa11.33□□□□□ -0.6
PFDN5-210ENST00000550513 PNOCQ13519 176 aa11.33□□□□□ -0.6
PFDN5-210ENST00000550513 TRIP6Q15654 476 aaKnown RBP11.33□□□□□ -0.6
PFDN5-210ENST00000550513 FNDC3BQ53EP0 1204 aaKnown RBP11.33□□□□□ -0.6
PFDN5-210ENST00000550513 RAB44Q7Z6P3 723 aaPredicted RBP11.33□□□□□ -0.6
PFDN5-210ENST00000550513 FAM124AQ86V42 546 aa11.33□□□□□ -0.6
PFDN5-210ENST00000550513 CHCHD4Q8N4Q1 142 aa11.33□□□□□ -0.6
PFDN5-210ENST00000550513 OR2T3Q8NH03 318 aa11.33□□□□□ -0.6
PFDN5-210ENST00000550513 WFIKKN2Q8TEU8 576 aa11.33□□□□□ -0.6
PFDN5-210ENST00000550513 SNX19Q92543 992 aa11.33□□□□□ -0.6
PFDN5-210ENST00000550513 NDRG1Q92597 394 aaKnown RBP11.33□□□□□ -0.6
PFDN5-210ENST00000550513 EDEM1Q92611 657 aa11.33□□□□□ -0.6
PFDN5-210ENST00000550513 NUP58Q9BVL2 599 aa11.33□□□□□ -0.6
PFDN5-210ENST00000550513 LHX5Q9H2C1 402 aa11.33□□□□□ -0.6
PFDN5-210ENST00000550513 SFMBT1Q9UHJ3 866 aa11.33□□□□□ -0.6
PFDN5-210ENST00000550513 MYLKQ15746 1914 aa11.33□□□□□ -0.6
PFDN5-210ENST00000550513 DMXL2Q8TDJ6 3036 aa11.33□□□□□ -0.6
PFDN5-210ENST00000550513 YJEFN3A6XGL0 299 aa11.32□□□□□ -0.6
PFDN5-210ENST00000550513 METTL12A8MUP2 240 aa11.32□□□□□ -0.6
PFDN5-210ENST00000550513 E7ENQ6 273 aa11.32□□□□□ -0.6
PFDN5-210ENST00000550513 BCAT2O15382 392 aaPredicted RBP11.32□□□□□ -0.6
PFDN5-210ENST00000550513 MSI1O43347 362 aaKnown RBP11.32□□□□□ -0.6
PFDN5-210ENST00000550513 TIMM44O43615 452 aa11.32□□□□□ -0.6
PFDN5-210ENST00000550513 TSPAN3O60637 253 aa11.32□□□□□ -0.6
PFDN5-210ENST00000550513 LATS1O95835 1130 aa11.32□□□□□ -0.6
PFDN5-210ENST00000550513 TBXAS1P24557 533 aaPredicted RBP11.32□□□□□ -0.6
PFDN5-210ENST00000550513 MATKP42679 507 aa11.32□□□□□ -0.6
PFDN5-210ENST00000550513 PRCPP42785 496 aa11.32□□□□□ -0.6
PFDN5-210ENST00000550513 CAMK2GQ13555 558 aaPredicted RBP11.32□□□□□ -0.6
PFDN5-210ENST00000550513 ZNF658Q5TYW1 1059 aaPredicted RBP11.32□□□□□ -0.6
PFDN5-210ENST00000550513 BSPRYQ5W0U4 402 aa11.32□□□□□ -0.6
PFDN5-210ENST00000550513 IL27RAQ6UWB1 636 aa11.32□□□□□ -0.6
PFDN5-210ENST00000550513 CHST9Q7L1S5 443 aa11.32□□□□□ -0.6
PFDN5-210ENST00000550513 AHI1Q8N157 1196 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms