RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 LAIR1Q6GTX8 287 aa17.93■□□□□ 0.46
CHMP1A-208ENST00000550102 OLFML1Q6UWY5 402 aa17.93■□□□□ 0.46
CHMP1A-208ENST00000550102 FAM183BPQ6ZVS7 135 aa17.93■□□□□ 0.46
CHMP1A-208ENST00000550102 CEP68Q76N32 757 aa17.93■□□□□ 0.46
CHMP1A-208ENST00000550102 APTXQ7Z2E3 356 aaKnown RBP17.93■□□□□ 0.46
CHMP1A-208ENST00000550102 NOP9Q86U38 636 aaKnown RBP17.93■□□□□ 0.46
CHMP1A-208ENST00000550102 ADAM32Q8TC27 787 aa17.93■□□□□ 0.46
CHMP1A-208ENST00000550102 GAB3Q8WWW8 586 aa17.93■□□□□ 0.46
CHMP1A-208ENST00000550102 FCRL2Q96LA5 508 aaPredicted RBP17.93■□□□□ 0.46
CHMP1A-208ENST00000550102 ERGIC2Q96RQ1 377 aa17.93■□□□□ 0.46
CHMP1A-208ENST00000550102 SLC2A11Q9BYW1 496 aa17.93■□□□□ 0.46
CHMP1A-208ENST00000550102 NLRC4Q9NPP4 1024 aa17.93■□□□□ 0.46
CHMP1A-208ENST00000550102 EBF1Q9UH73 591 aa17.93■□□□□ 0.46
CHMP1A-208ENST00000550102 FBXO10Q9UK96 956 aa17.93■□□□□ 0.46
CHMP1A-208ENST00000550102 STARD13Q9Y3M8 1113 aa17.93■□□□□ 0.46
CHMP1A-208ENST00000550102 CKAP5Q14008 2032 aa17.93■□□□□ 0.46
CHMP1A-208ENST00000550102 LRRC10BA6NIK2 292 aa17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 GFRA2O00451 464 aa17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 IRAK2O43187 625 aa17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 HRO43593 1189 aa17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 RPP40O75818 363 aaKnown RBP17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 ALDH1A2O94788 518 aa17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 GFPT2O94808 682 aa17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 APOEP02649 317 aa17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 CISD3P0C7P0 127 aa17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 HOXD9P28356 352 aaPredicted RBP17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 SOX5P35711 763 aa17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 DCAF6Q58WW2 860 aa17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 EGFLAMQ63HQ2 1017 aa17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 OR6B2Q6IFH4 312 aa17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 SLC26A9Q7LBE3 791 aa17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 ANKS1BQ7Z6G8 1248 aa17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 ZNF677Q86XU0 584 aa17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 DHX40Q8IX18 779 aaKnown RBP17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 MSANTD4Q8NCY6 345 aa17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 DDX1Q92499 740 aaKnown RBP17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 AZIN2Q96A70 460 aa17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 SLC2A13Q96QE2 648 aa17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 DDX50Q9BQ39 737 aaKnown RBP17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 IRX2Q9BZI1 471 aaPredicted RBP17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 FAM204AQ9H8W3 233 aa17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 ZDHHC4Q9NPG8 344 aa17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 GMEB2Q9UKD1 530 aa17.92■□□□□ 0.46
CHMP1A-208ENST00000550102 SYCE3A1L190 88 aa17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 PRRT4C9JH25 899 aa17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 ACSL4O60488 711 aa17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 TSPAN3O60637 253 aa17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 ADAM23O75077 832 aa17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 DAB1O75553 588 aa17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 TRUB2O95900 331 aaKnown RBP17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 IGLV3-25P01717 112 aa17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 NTSR1P30989 418 aa17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 CDK17Q00537 523 aa17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 TAF5Q15542 800 aa17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 LPAL2Q16609 132 aa17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 FAM133BQ5BKY9 247 aaKnown RBP17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 ANO7Q6IWH7 933 aa17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 RASSF3Q86WH2 238 aa17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 ZDHHC17Q8IUH5 632 aa17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 SLC39A13Q96H72 371 aa17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 FUCA2Q9BTY2 467 aa17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 POLMQ9NP87 494 aaPredicted RBP17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 NOCTQ9UK39 431 aaKnown RBP17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 DMXL1Q9Y485 3027 aa17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 THADAQ6YHU6 1953 aa17.91■□□□□ 0.46
CHMP1A-208ENST00000550102 NYNRINQ9P2P1 1898 aaKnown RBP17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 CEP250Q9BV73 2442 aa17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 TYW5A2RUC4 315 aaKnown RBP17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 GRAP2O75791 330 aa17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 MOCS2O96007 188 aaPredicted RBP17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 MMEP08473 750 aa17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 HOXB2P14652 356 aa17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 STAT1P42224 750 aa17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 SLC6A3Q01959 620 aa17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 EIF4HQ15056 248 aaKnown RBP17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 E2F5Q15329 346 aa17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 MPP7Q5T2T1 576 aa17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 SDE2Q6IQ49 451 aa17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 RFWD3Q6PCD5 774 aa17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 TMEM92Q6UXU6 159 aa17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 CHPFQ8IZ52 775 aa17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 DEFB106AQ8N104 65 aa17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 HJURPQ8NCD3 748 aaPredicted RBP17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 ZNF397Q8NF99 534 aaPredicted RBP17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 MDGA1Q8NFP4 955 aa17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 SLC20A1Q8WUM9 679 aa17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 TMA16Q96EY4 203 aaKnown RBP17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 DDIT4Q9NX09 232 aa17.9■□□□□ 0.46
CHMP1A-208ENST00000550102 NUP205Q92621 2012 aa17.89■□□□□ 0.46
CHMP1A-208ENST00000550102 SDK1Q7Z5N4 2213 aa17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 SLC2A3P11169 496 aa17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 HNRNPLP14866 589 aaKnown RBP eCLIP17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 SLC6A4P31645 630 aa17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 SCNN1AP37088 669 aa17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 SGSHP51688 502 aa17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 NOMO3P69849 1222 aa17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 PITX1P78337 314 aaPredicted RBP17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 CDR2Q01850 454 aa17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 GEN1Q17RS7 908 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms