RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 PPP1R2P3Q6NXS1 205 aa26.97■■□□□ 1.91
CPSF6-205ENST00000550075 MAML2Q8IZL2 1156 aaPredicted RBP26.97■■□□□ 1.91
CPSF6-205ENST00000550075 PHTF2Q8N3S3 785 aa26.97■■□□□ 1.91
CPSF6-205ENST00000550075 RPLP0P6Q8NHW5 317 aa26.97■■□□□ 1.91
CPSF6-205ENST00000550075 C11orf70Q9BRQ4 267 aa26.97■■□□□ 1.91
CPSF6-205ENST00000550075 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.97■■□□□ 1.91
CPSF6-205ENST00000550075 PLK2Q9NYY3 685 aa26.97■■□□□ 1.91
CPSF6-205ENST00000550075 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.97■■□□□ 1.91
CPSF6-205ENST00000550075 A0A1W2PQJ5 194 aa26.96■■□□□ 1.91
CPSF6-205ENST00000550075 K7EQS6 105 aa26.96■■□□□ 1.91
CPSF6-205ENST00000550075 MOCS2O96007 188 aaPredicted RBP26.96■■□□□ 1.91
CPSF6-205ENST00000550075 CALB1P05937 261 aa26.96■■□□□ 1.91
CPSF6-205ENST00000550075 PBX1P40424 430 aa26.96■■□□□ 1.91
CPSF6-205ENST00000550075 RNASE9P60153 205 aaKnown RBP26.96■■□□□ 1.91
CPSF6-205ENST00000550075 MRPS21P82921 87 aaKnown RBP26.96■■□□□ 1.91
CPSF6-205ENST00000550075 HSF5Q4G112 596 aaPredicted RBP26.96■■□□□ 1.91
CPSF6-205ENST00000550075 ATP6V0D2Q8N8Y2 350 aa26.96■■□□□ 1.91
CPSF6-205ENST00000550075 RNF214Q8ND24 703 aa26.96■■□□□ 1.91
CPSF6-205ENST00000550075 RNF34Q969K3 372 aa26.96■■□□□ 1.91
CPSF6-205ENST00000550075 ATG2BQ96BY7 2078 aa26.96■■□□□ 1.91
CPSF6-205ENST00000550075 A0A0A0MRY4 1105 aa26.95■■□□□ 1.9
CPSF6-205ENST00000550075 UNGP13051 313 aaPredicted RBP26.95■■□□□ 1.9
CPSF6-205ENST00000550075 CCR1P32246 355 aa26.95■■□□□ 1.9
CPSF6-205ENST00000550075 SEC13P55735 322 aa26.95■■□□□ 1.9
CPSF6-205ENST00000550075 C10orf76Q5T2E6 689 aa26.95■■□□□ 1.9
CPSF6-205ENST00000550075 IRF2BP2Q7Z5L9 587 aa26.95■■□□□ 1.9
CPSF6-205ENST00000550075 SLC30A5Q8TAD4 765 aa26.95■■□□□ 1.9
CPSF6-205ENST00000550075 USP33Q8TEY7 942 aa26.95■■□□□ 1.9
CPSF6-205ENST00000550075 TMA16Q96EY4 203 aaKnown RBP26.95■■□□□ 1.9
CPSF6-205ENST00000550075 BTN2A3PQ96KV6 586 aa26.95■■□□□ 1.9
CPSF6-205ENST00000550075 PCDHB18PQ96TA0 734 aa26.95■■□□□ 1.9
CPSF6-205ENST00000550075 SLC2A11Q9BYW1 496 aa26.95■■□□□ 1.9
CPSF6-205ENST00000550075 FAM86C1Q9NVL1 165 aa26.95■■□□□ 1.9
CPSF6-205ENST00000550075 AIPL1Q9NZN9 384 aa26.95■■□□□ 1.9
CPSF6-205ENST00000550075 ADAM22Q9P0K1 906 aa26.95■■□□□ 1.9
CPSF6-205ENST00000550075 SLC8A2Q9UPR5 921 aa26.95■■□□□ 1.9
CPSF6-205ENST00000550075 PAXBP1Q9Y5B6 917 aa26.95■■□□□ 1.9
CPSF6-205ENST00000550075 SYNJ2BP-COX16A0A087WUM0 186 aa26.94■■□□□ 1.9
CPSF6-205ENST00000550075 FAM170AA1A519 330 aa26.94■■□□□ 1.9
CPSF6-205ENST00000550075 TSPAN3O60637 253 aa26.94■■□□□ 1.9
CPSF6-205ENST00000550075 ABCB4P21439 1286 aa26.94■■□□□ 1.9
CPSF6-205ENST00000550075 TNFAIP3P21580 790 aa26.94■■□□□ 1.9
CPSF6-205ENST00000550075 PITX1P78337 314 aaPredicted RBP26.94■■□□□ 1.9
CPSF6-205ENST00000550075 C2CD6Q53TS8 623 aa26.94■■□□□ 1.9
CPSF6-205ENST00000550075 C2orf27AQ580R0 203 aa26.94■■□□□ 1.9
CPSF6-205ENST00000550075 ZC3H12AQ5D1E8 599 aaKnown RBP26.94■■□□□ 1.9
CPSF6-205ENST00000550075 SND1Q7KZF4 910 aaKnown RBP eCLIP26.94■■□□□ 1.9
CPSF6-205ENST00000550075 ARCQ7LC44 396 aa26.94■■□□□ 1.9
CPSF6-205ENST00000550075 TRMT11Q7Z4G4 463 aaKnown RBP26.94■■□□□ 1.9
CPSF6-205ENST00000550075 PHF13Q86YI8 300 aaPredicted RBP26.94■■□□□ 1.9
CPSF6-205ENST00000550075 ZNF557Q8N988 423 aaPredicted RBP26.94■■□□□ 1.9
CPSF6-205ENST00000550075 HJURPQ8NCD3 748 aaPredicted RBP26.94■■□□□ 1.9
CPSF6-205ENST00000550075 KCNV2Q8TDN2 545 aa26.94■■□□□ 1.9
CPSF6-205ENST00000550075 XPO4Q9C0E2 1151 aaKnown RBP26.94■■□□□ 1.9
CPSF6-205ENST00000550075 COX16Q9P0S2 106 aa26.94■■□□□ 1.9
CPSF6-205ENST00000550075 SLC27A6Q9Y2P4 619 aa26.94■■□□□ 1.9
CPSF6-205ENST00000550075 PCDHGA2Q9Y5H1 932 aa26.94■■□□□ 1.9
CPSF6-205ENST00000550075 ITIH6Q6UXX5 1313 aa26.93■■□□□ 1.9
CPSF6-205ENST00000550075 M0QYT0 321 aa26.93■■□□□ 1.9
CPSF6-205ENST00000550075 NBL1P41271 181 aa26.93■■□□□ 1.9
CPSF6-205ENST00000550075 PRKCIP41743 596 aa26.93■■□□□ 1.9
CPSF6-205ENST00000550075 SULT1E1P49888 294 aa26.93■■□□□ 1.9
CPSF6-205ENST00000550075 KLHL30Q0D2K2 578 aa26.93■■□□□ 1.9
CPSF6-205ENST00000550075 MESP2Q0VG99 397 aa26.93■■□□□ 1.9
CPSF6-205ENST00000550075 NME3Q13232 169 aa26.93■■□□□ 1.9
CPSF6-205ENST00000550075 FAM133BQ5BKY9 247 aaKnown RBP26.93■■□□□ 1.9
CPSF6-205ENST00000550075 PKN3Q6P5Z2 889 aa26.93■■□□□ 1.9
CPSF6-205ENST00000550075 SYT13Q7L8C5 426 aa26.93■■□□□ 1.9
CPSF6-205ENST00000550075 METTL5Q9NRN9 209 aaKnown RBP26.93■■□□□ 1.9
CPSF6-205ENST00000550075 ZSCAN32Q9NX65 697 aa26.93■■□□□ 1.9
CPSF6-205ENST00000550075 FBXO10Q9UK96 956 aa26.93■■□□□ 1.9
CPSF6-205ENST00000550075 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.93■■□□□ 1.93e-12■■■□□ 16.2
CPSF6-205ENST00000550075 GFRA2O00451 464 aa26.92■■□□□ 1.9
CPSF6-205ENST00000550075 F9P00740 461 aa26.92■■□□□ 1.9
CPSF6-205ENST00000550075 GSCP56915 257 aaPredicted RBP26.92■■□□□ 1.9
CPSF6-205ENST00000550075 C1QBPQ07021 282 aaKnown RBP26.92■■□□□ 1.9
CPSF6-205ENST00000550075 EIF4EBP2Q13542 120 aaPredicted RBP26.92■■□□□ 1.9
CPSF6-205ENST00000550075 E2F5Q15329 346 aa26.92■■□□□ 1.9
CPSF6-205ENST00000550075 MPP7Q5T2T1 576 aa26.92■■□□□ 1.9
CPSF6-205ENST00000550075 TSSK4Q6SA08 328 aa26.92■■□□□ 1.9
CPSF6-205ENST00000550075 ANKS1BQ7Z6G8 1248 aa26.92■■□□□ 1.9
CPSF6-205ENST00000550075 CHSY1Q86X52 802 aa26.92■■□□□ 1.9
CPSF6-205ENST00000550075 ATRIPQ8WXE1 791 aa26.92■■□□□ 1.9
CPSF6-205ENST00000550075 NPY6RQ99463 290 aa26.92■■□□□ 1.9
CPSF6-205ENST00000550075 FANCMQ8IYD8 2048 aa26.91■■□□□ 1.9
CPSF6-205ENST00000550075 KCNU1A8MYU2 1149 aa26.91■■□□□ 1.9
CPSF6-205ENST00000550075 HOXD9P28356 352 aaPredicted RBP26.91■■□□□ 1.9
CPSF6-205ENST00000550075 TIE1P35590 1138 aa26.91■■□□□ 1.9
CPSF6-205ENST00000550075 ZBED6P86452 979 aa26.91■■□□□ 1.9
CPSF6-205ENST00000550075 DMC1Q14565 340 aa26.91■■□□□ 1.9
CPSF6-205ENST00000550075 SLC25A52Q3SY17 297 aa26.91■■□□□ 1.9
CPSF6-205ENST00000550075 PIK3R6Q5UE93 754 aa26.91■■□□□ 1.9
CPSF6-205ENST00000550075 NADSYN1Q6IA69 706 aa26.91■■□□□ 1.9
CPSF6-205ENST00000550075 RFWD3Q6PCD5 774 aa26.91■■□□□ 1.9
CPSF6-205ENST00000550075 CCDC117Q8IWD4 279 aaPredicted RBP26.91■■□□□ 1.9
CPSF6-205ENST00000550075 SYN2Q92777 582 aaPredicted RBP26.91■■□□□ 1.9
CPSF6-205ENST00000550075 PGAP3Q96FM1 320 aaPredicted RBP26.91■■□□□ 1.9
CPSF6-205ENST00000550075 TMEM59LQ9UK28 342 aa26.91■■□□□ 1.9
CPSF6-205ENST00000550075 MMP17Q9ULZ9 603 aa26.91■■□□□ 1.9
CPSF6-205ENST00000550075 LUC7L2Q9Y383 392 aaKnown RBP26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms