RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 ARHGAP18Q8N392 663 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 CADM4Q8NFZ8 388 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 PRCCQ92733 491 aaPredicted RBP16.13■□□□□ 0.17
RAB5C-205ENST00000550013 TATDN2Q93075 761 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 TMEM176AQ96HP8 235 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 EIF2B4Q9UI10 523 aaKnown RBP16.13■□□□□ 0.17
RAB5C-205ENST00000550013 NFE2L3Q9Y4A8 694 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 LAMA5O15230 3695 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 ADAMTS20P59510 1910 aa16.13■□□□□ 0.17
RAB5C-205ENST00000550013 MUC22E2RYF6 1773 aaPredicted RBP16.13■□□□□ 0.17
RAB5C-205ENST00000550013 TMEM131Q92545 1883 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 BCAT2O15382 392 aaPredicted RBP16.12■□□□□ 0.17
RAB5C-205ENST00000550013 TSPAN3O60637 253 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 IGLV3-19P01714 112 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 EPHX1P07099 455 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 RPL13P26373 211 aaKnown RBP16.12■□□□□ 0.17
RAB5C-205ENST00000550013 OXTRP30559 389 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 GTF2H1P32780 548 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 SYKP43405 635 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 MXI1P50539 228 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 TKTL1P51854 596 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 EIF4HQ15056 248 aaKnown RBP16.12■□□□□ 0.17
RAB5C-205ENST00000550013 ZCWPW2Q504Y3 356 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 ARHGAP17Q68EM7 881 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 SERPINA13PQ6UXR4 307 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 PROSER1Q86XN7 944 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 FAM217AQ8IXS0 508 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 GUF1Q8N442 669 aaKnown RBP16.12■□□□□ 0.17
RAB5C-205ENST00000550013 C1orf216Q8TAB5 229 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 CCDC47Q96A33 483 aaKnown RBP16.12■□□□□ 0.17
RAB5C-205ENST00000550013 SPATA32Q96LK8 384 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 NUP58Q9BVL2 599 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 ULBP1Q9BZM6 244 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 UBXN6Q9BZV1 441 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 GAREM1Q9H706 876 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 PCOLCE2Q9UKZ9 415 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 FNDC3AQ9Y2H6 1198 aaKnown RBP16.12■□□□□ 0.17
RAB5C-205ENST00000550013 SLCO1B1Q9Y6L6 691 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 ACACAQ13085 2346 aa16.12■□□□□ 0.17
RAB5C-205ENST00000550013 APC2O95996 2303 aa16.11■□□□□ 0.17
RAB5C-205ENST00000550013 ZBED1O96006 694 aa16.11■□□□□ 0.17
RAB5C-205ENST00000550013 ACADMP11310 421 aa16.11■□□□□ 0.17
RAB5C-205ENST00000550013 HOXD9P28356 352 aaPredicted RBP16.11■□□□□ 0.17
RAB5C-205ENST00000550013 MATKP42679 507 aa16.11■□□□□ 0.17
RAB5C-205ENST00000550013 TRIP4Q15650 581 aaPredicted RBP16.11■□□□□ 0.17
RAB5C-205ENST00000550013 GOLGA7BQ2TAP0 167 aa16.11■□□□□ 0.17
RAB5C-205ENST00000550013 PM20D1Q6GTS8 502 aa16.11■□□□□ 0.17
RAB5C-205ENST00000550013 FMNL3Q8IVF7 1028 aa16.11■□□□□ 0.17
RAB5C-205ENST00000550013 TTC39CQ8N584 583 aa16.11■□□□□ 0.17
RAB5C-205ENST00000550013 ZNF366Q8N895 744 aa16.11■□□□□ 0.17
RAB5C-205ENST00000550013 ANKRD52Q8NB46 1076 aa16.11■□□□□ 0.17
RAB5C-205ENST00000550013 FBXL13Q8NEE6 735 aa16.11■□□□□ 0.17
RAB5C-205ENST00000550013 SETD7Q8WTS6 366 aaKnown RBP16.11■□□□□ 0.17
RAB5C-205ENST00000550013 PLD4Q96BZ4 506 aa16.11■□□□□ 0.17
RAB5C-205ENST00000550013 SLC2A11Q9BYW1 496 aa16.11■□□□□ 0.17
RAB5C-205ENST00000550013 RAB20Q9NX57 234 aa16.11■□□□□ 0.17
RAB5C-205ENST00000550013 FAM237AA0A1B0GTK4 181 aa16.1■□□□□ 0.17
RAB5C-205ENST00000550013 A0A1B0GVT2 93 aa16.1■□□□□ 0.17
RAB5C-205ENST00000550013 CER1O95813 267 aa16.1■□□□□ 0.17
RAB5C-205ENST00000550013 MCCD1P59942 119 aaPredicted RBP16.1■□□□□ 0.17
RAB5C-205ENST00000550013 ARID5AQ03989 594 aa16.1■□□□□ 0.17
RAB5C-205ENST00000550013 PDE4CQ08493 712 aa16.1■□□□□ 0.17
RAB5C-205ENST00000550013 HLA-BQ31612 363 aa16.1■□□□□ 0.17
RAB5C-205ENST00000550013 FNDC3BQ53EP0 1204 aaKnown RBP16.1■□□□□ 0.17
RAB5C-205ENST00000550013 MPPE1Q53F39 396 aa16.1■□□□□ 0.17
RAB5C-205ENST00000550013 CCNI2Q6ZMN8 369 aaPredicted RBP16.1■□□□□ 0.17
RAB5C-205ENST00000550013 GLRX5Q86SX6 157 aa16.1■□□□□ 0.17
RAB5C-205ENST00000550013 SMYD4Q8IYR2 804 aaPredicted RBP16.1■□□□□ 0.17
RAB5C-205ENST00000550013 OR2T3Q8NH03 318 aa16.1■□□□□ 0.17
RAB5C-205ENST00000550013 CYB5D2Q8WUJ1 264 aa16.1■□□□□ 0.17
RAB5C-205ENST00000550013 SNX19Q92543 992 aa16.1■□□□□ 0.17
RAB5C-205ENST00000550013 EDEM1Q92611 657 aa16.1■□□□□ 0.17
RAB5C-205ENST00000550013 FAXDC2Q96IV6 333 aa16.1■□□□□ 0.17
RAB5C-205ENST00000550013 C6orf106Q9H6K1 298 aaPredicted RBP16.1■□□□□ 0.17
RAB5C-205ENST00000550013 TM7SF3Q9NS93 570 aa16.1■□□□□ 0.17
RAB5C-205ENST00000550013 SFMBT1Q9UHJ3 866 aa16.1■□□□□ 0.17
RAB5C-205ENST00000550013 APOBEC2Q9Y235 224 aaKnown RBP16.1■□□□□ 0.17
RAB5C-205ENST00000550013 GOLGA4Q13439 2230 aaKnown RBP16.1■□□□□ 0.17
RAB5C-205ENST00000550013 TIMM44O43615 452 aa16.09■□□□□ 0.17
RAB5C-205ENST00000550013 ZNF883P0CG24 379 aa16.09■□□□□ 0.17
RAB5C-205ENST00000550013 HLA-FP30511 346 aa16.09■□□□□ 0.17
RAB5C-205ENST00000550013 ACSL1P33121 698 aa16.09■□□□□ 0.17
RAB5C-205ENST00000550013 CSNK1EP49674 416 aaKnown RBP16.09■□□□□ 0.17
RAB5C-205ENST00000550013 SLC8A3P57103 927 aa16.09■□□□□ 0.17
RAB5C-205ENST00000550013 ADIGQ0VDE8 80 aa16.09■□□□□ 0.17
RAB5C-205ENST00000550013 CAMK2GQ13555 558 aaPredicted RBP16.09■□□□□ 0.17
RAB5C-205ENST00000550013 E2F5Q15329 346 aa16.09■□□□□ 0.17
RAB5C-205ENST00000550013 C19orf48Q6RUI8 117 aa16.09■□□□□ 0.17
RAB5C-205ENST00000550013 KRBA2Q6ZNG9 492 aa16.09■□□□□ 0.17
RAB5C-205ENST00000550013 CHST9Q7L1S5 443 aa16.09■□□□□ 0.17
RAB5C-205ENST00000550013 LHX5Q9H2C1 402 aa16.09■□□□□ 0.17
RAB5C-205ENST00000550013 TMEM245Q9H330 911 aa16.09■□□□□ 0.17
RAB5C-205ENST00000550013 GOLPH3LQ9H4A5 285 aa16.09■□□□□ 0.17
RAB5C-205ENST00000550013 TSPAN16Q9UKR8 245 aa16.09■□□□□ 0.17
RAB5C-205ENST00000550013 IGSF10Q6WRI0 2623 aa16.08■□□□□ 0.17
RAB5C-205ENST00000550013 TP53BP1Q12888 1972 aaPredicted RBP16.08■□□□□ 0.16
RAB5C-205ENST00000550013 XPO1O14980 1071 aaKnown RBP16.08■□□□□ 0.16
RAB5C-205ENST00000550013 MSI1O43347 362 aaKnown RBP16.08■□□□□ 0.16
RAB5C-205ENST00000550013 HARS2P49590 506 aaKnown RBP16.08■□□□□ 0.16
RAB5C-205ENST00000550013 SGSHP51688 502 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms