RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 CKAP5Q14008 2032 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 PLXND1Q9Y4D7 1925 aa10.19□□□□□ -0.78
HDAC7-229ENST00000549883 MUC22E2RYF6 1773 aaPredicted RBP10.19□□□□□ -0.78
HDAC7-229ENST00000549883 FRYLO94915 3013 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 A0A1W2PQF6 199 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 LGALS16A8MUM7 142 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 TEX33O43247 280 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 RPP40O75818 363 aaKnown RBP10.18□□□□□ -0.78
HDAC7-229ENST00000549883 MOCS2O96007 188 aaPredicted RBP10.18□□□□□ -0.78
HDAC7-229ENST00000549883 IGLV3-25P01717 112 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 MMEP08473 750 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 BCKDHBP21953 392 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 KRT9P35527 623 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 CHKAP35790 457 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 HARS2P49590 506 aaKnown RBP10.18□□□□□ -0.78
HDAC7-229ENST00000549883 NUMBP49757 651 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 DGKEP52429 567 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 JAM2P57087 298 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 RPS24P62847 133 aaKnown RBP10.18□□□□□ -0.78
HDAC7-229ENST00000549883 YWHAZP63104 245 aaKnown RBP10.18□□□□□ -0.78
HDAC7-229ENST00000549883 EIF4EBP2Q13542 120 aaPredicted RBP10.18□□□□□ -0.78
HDAC7-229ENST00000549883 MEA1Q16626 185 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 ZC3H12AQ5D1E8 599 aaKnown RBP10.18□□□□□ -0.78
HDAC7-229ENST00000549883 ADGRF1Q5T601 910 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 OTUD1Q5VV17 481 aaPredicted RBP10.18□□□□□ -0.78
HDAC7-229ENST00000549883 OR6B2Q6IFH4 312 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 OLFML1Q6UWY5 402 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 CEP68Q76N32 757 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 RASSF3Q86WH2 238 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 CFAP52Q8N1V2 620 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 CAMKK1Q8N5S9 505 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 DDI1Q8WTU0 396 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 HMGB4Q8WW32 186 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 PRICKLE1Q96MT3 831 aaPredicted RBP10.18□□□□□ -0.78
HDAC7-229ENST00000549883 STK33Q9BYT3 514 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 NUCKS1Q9H1E3 243 aaKnown RBP10.18□□□□□ -0.78
HDAC7-229ENST00000549883 CD248Q9HCU0 757 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 CD93Q9NPY3 652 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 CACNA2D2Q9NY47 1150 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 EBF1Q9UH73 591 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 STOML2Q9UJZ1 356 aa10.18□□□□□ -0.78
HDAC7-229ENST00000549883 TNRC6BQ9UPQ9 1833 aaKnown RBP10.18□□□□□ -0.78
HDAC7-229ENST00000549883 SYNJ2BP-COX16A0A087WUM0 186 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 CCDC163A0A0D9SF12 145 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 TCRBV21S2A2A0A5A6 115 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 IRAK2O43187 625 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 ACSL4O60488 711 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 TBL1XO60907 577 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 TRUB2O95900 331 aaKnown RBP10.17□□□□□ -0.78
HDAC7-229ENST00000549883 GABRG2P18507 467 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 HLA-FP30511 346 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 CDH5P33151 784 aaPredicted RBP10.17□□□□□ -0.78
HDAC7-229ENST00000549883 IRAK1P51617 712 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 UBXN1Q04323 297 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 RING1Q06587 406 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 SPEM2Q0P670 501 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 DCAF6Q58WW2 860 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 EOGTQ5NDL2 527 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 PIK3R6Q5UE93 754 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 NAA35Q5VZE5 725 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 TRNP1Q6NT89 227 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 PHLDB2Q86SQ0 1253 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 EPS8L1Q8TE68 723 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 CPA5Q8WXQ8 436 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 GOLGA1Q92805 767 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 TMA16Q96EY4 203 aaKnown RBP10.17□□□□□ -0.78
HDAC7-229ENST00000549883 SLC2A13Q96QE2 648 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 PCDHB18PQ96TA0 734 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 SMOC1Q9H4F8 434 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 ANLNQ9NQW6 1124 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 COX16Q9P0S2 106 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 STIM2Q9P246 746 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 TLR6Q9Y2C9 796 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 SLC27A6Q9Y2P4 619 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 STARD13Q9Y3M8 1113 aa10.17□□□□□ -0.78
HDAC7-229ENST00000549883 WDR87Q6ZQQ6 2873 aa10.16□□□□□ -0.78
HDAC7-229ENST00000549883 NUMA1Q14980 2115 aa10.16□□□□□ -0.78
HDAC7-229ENST00000549883 ZNF292O60281 2723 aa10.16□□□□□ -0.78
HDAC7-229ENST00000549883 SPTBN4Q9H254 2564 aa10.16□□□□□ -0.78
HDAC7-229ENST00000549883 SYCE3A1L190 88 aa10.16□□□□□ -0.78
HDAC7-229ENST00000549883 LRRC10BA6NIK2 292 aa10.16□□□□□ -0.78
HDAC7-229ENST00000549883 I6L893 689 aaPredicted RBP10.16□□□□□ -0.78
HDAC7-229ENST00000549883 CAPN9O14815 690 aa10.16□□□□□ -0.78
HDAC7-229ENST00000549883 SART1O43290 800 aaKnown RBP10.16□□□□□ -0.78
HDAC7-229ENST00000549883 GJB6O95452 261 aa10.16□□□□□ -0.78
HDAC7-229ENST00000549883 CYBBP04839 570 aa10.16□□□□□ -0.78
HDAC7-229ENST00000549883 HOXB2P14652 356 aa10.16□□□□□ -0.78
HDAC7-229ENST00000549883 CDK11BP21127 795 aaKnown RBP10.16□□□□□ -0.78
HDAC7-229ENST00000549883 PRKCHP24723 683 aa10.16□□□□□ -0.78
HDAC7-229ENST00000549883 NTSR1P30989 418 aa10.16□□□□□ -0.78
HDAC7-229ENST00000549883 CD70P32970 193 aa10.16□□□□□ -0.78
HDAC7-229ENST00000549883 CNR2P34972 360 aa10.16□□□□□ -0.78
HDAC7-229ENST00000549883 SOX5P35711 763 aa10.16□□□□□ -0.78
HDAC7-229ENST00000549883 GGCXP38435 758 aa10.16□□□□□ -0.78
HDAC7-229ENST00000549883 IL12RB1P42701 662 aa10.16□□□□□ -0.78
HDAC7-229ENST00000549883 RNASE9P60153 205 aaKnown RBP10.16□□□□□ -0.78
HDAC7-229ENST00000549883 NOMO3P69849 1222 aa10.16□□□□□ -0.78
HDAC7-229ENST00000549883 FMO1Q01740 532 aa10.16□□□□□ -0.78
HDAC7-229ENST00000549883 SLC6A3Q01959 620 aa10.16□□□□□ -0.78
HDAC7-229ENST00000549883 IQCB1Q15051 598 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms