RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 TRIM62Q9BVG3 475 aa19.79■□□□□ 0.76
BRF1-215ENST00000549655 RNF208Q9H0X6 261 aa19.79■□□□□ 0.76
BRF1-215ENST00000549655 EPN3Q9H201 632 aa19.79■□□□□ 0.76
BRF1-215ENST00000549655 ETNK1Q9HBU6 452 aa19.79■□□□□ 0.76
BRF1-215ENST00000549655 TBK1Q9UHD2 729 aa19.79■□□□□ 0.76
BRF1-215ENST00000549655 ADAM28Q9UKQ2 775 aa19.79■□□□□ 0.76
BRF1-215ENST00000549655 CLUHO75153 1309 aa19.79■□□□□ 0.76
BRF1-215ENST00000549655 C5orf60A6NFR6 353 aa19.78■□□□□ 0.76
BRF1-215ENST00000549655 DCLK1O15075 740 aa19.78■□□□□ 0.76
BRF1-215ENST00000549655 YWHAGP61981 247 aaKnown RBP eCLIP19.78■□□□□ 0.76
BRF1-215ENST00000549655 BEND5Q7L4P6 421 aa19.78■□□□□ 0.76
BRF1-215ENST00000549655 CEP57Q86XR8 500 aa19.78■□□□□ 0.76
BRF1-215ENST00000549655 CYP4X1Q8N118 509 aa19.78■□□□□ 0.76
BRF1-215ENST00000549655 ATP11CQ8NB49 1132 aa19.78■□□□□ 0.76
BRF1-215ENST00000549655 NETO2Q8NC67 525 aa19.78■□□□□ 0.76
BRF1-215ENST00000549655 DQX1Q8TE96 717 aaKnown RBP19.78■□□□□ 0.76
BRF1-215ENST00000549655 HTR3CQ8WXA8 447 aa19.78■□□□□ 0.76
BRF1-215ENST00000549655 APBB2Q92870 758 aa19.78■□□□□ 0.76
BRF1-215ENST00000549655 TKTL2Q9H0I9 626 aa19.78■□□□□ 0.76
BRF1-215ENST00000549655 OGDHLQ9ULD0 1010 aa19.78■□□□□ 0.76
BRF1-215ENST00000549655 SF3B1O75533 1304 aaKnown RBP eCLIP19.78■□□□□ 0.763e-6■■■■■ 56.8
BRF1-215ENST00000549655 COL4A4P53420 1690 aaPredicted RBP19.78■□□□□ 0.76
BRF1-215ENST00000549655 TTC3P53804 2025 aa19.77■□□□□ 0.76
BRF1-215ENST00000549655 VAV1P15498 845 aa19.77■□□□□ 0.76
BRF1-215ENST00000549655 ATN1P54259 1190 aaPredicted RBP19.77■□□□□ 0.76
BRF1-215ENST00000549655 TPI1P60174 286 aa19.77■□□□□ 0.76
BRF1-215ENST00000549655 PAFAH1B3Q15102 231 aaKnown RBP19.77■□□□□ 0.76
BRF1-215ENST00000549655 FAM171A1Q5VUB5 890 aa19.77■□□□□ 0.76
BRF1-215ENST00000549655 SCLYQ96I15 445 aa19.77■□□□□ 0.76
BRF1-215ENST00000549655 PPANQ9NQ55 473 aaKnown RBP19.77■□□□□ 0.76
BRF1-215ENST00000549655 EURLQ9NYK6 297 aa19.77■□□□□ 0.76
BRF1-215ENST00000549655 NR2E3Q9Y5X4 410 aa19.77■□□□□ 0.76
BRF1-215ENST00000549655 FOXO6A8MYZ6 492 aa19.77■□□□□ 0.75
BRF1-215ENST00000549655 METTL18O95568 372 aa19.77■□□□□ 0.75
BRF1-215ENST00000549655 ALDH2P05091 517 aa19.77■□□□□ 0.75
BRF1-215ENST00000549655 APRTP07741 180 aa19.77■□□□□ 0.75
BRF1-215ENST00000549655 CCL5P13501 91 aa19.77■□□□□ 0.75
BRF1-215ENST00000549655 CHN1P15882 459 aa19.77■□□□□ 0.75
BRF1-215ENST00000549655 ERCC2P18074 760 aa19.77■□□□□ 0.75
BRF1-215ENST00000549655 GCAP28676 217 aa19.77■□□□□ 0.75
BRF1-215ENST00000549655 SSTR1P30872 391 aa19.77■□□□□ 0.75
BRF1-215ENST00000549655 MAGEA6P43360 314 aa19.77■□□□□ 0.75
BRF1-215ENST00000549655 HCAR3P49019 387 aa19.77■□□□□ 0.75
BRF1-215ENST00000549655 NFE2Q16621 373 aaPredicted RBP19.77■□□□□ 0.75
BRF1-215ENST00000549655 CTXN3Q4LDR2 81 aa19.77■□□□□ 0.75
BRF1-215ENST00000549655 FOXR1Q6PIV2 292 aa19.77■□□□□ 0.75
BRF1-215ENST00000549655 C3orf62Q6ZUJ4 267 aa19.77■□□□□ 0.75
BRF1-215ENST00000549655 VPS52Q8N1B4 723 aa19.77■□□□□ 0.75
BRF1-215ENST00000549655 RIBC1Q8N443 379 aaPredicted RBP19.77■□□□□ 0.75
BRF1-215ENST00000549655 RNF34Q969K3 372 aa19.77■□□□□ 0.75
BRF1-215ENST00000549655 GPR62Q9BZJ7 368 aa19.77■□□□□ 0.75
BRF1-215ENST00000549655 HCSTQ9UBK5 93 aa19.77■□□□□ 0.75
BRF1-215ENST00000549655 VWA8A3KMH1 1905 aa19.77■□□□□ 0.75
BRF1-215ENST00000549655 POC1B-GALNT4F8VUJ3 575 aa19.76■□□□□ 0.75
BRF1-215ENST00000549655 PHBP35232 272 aa19.76■□□□□ 0.75
BRF1-215ENST00000549655 SEC24CP53992 1094 aa19.76■□□□□ 0.75
BRF1-215ENST00000549655 HNRNPH2P55795 449 aaKnown RBP19.76■□□□□ 0.75
BRF1-215ENST00000549655 PDK1Q15118 436 aa19.76■□□□□ 0.75
BRF1-215ENST00000549655 BTBD8Q5XKL5 378 aa19.76■□□□□ 0.75
BRF1-215ENST00000549655 PALM2Q8IXS6 379 aa19.76■□□□□ 0.75
BRF1-215ENST00000549655 FUBP3Q96I24 572 aaKnown RBP eCLIP19.76■□□□□ 0.75
BRF1-215ENST00000549655 ABCC13Q9NSE7 274 aa19.76■□□□□ 0.75
BRF1-215ENST00000549655 SCN5AQ14524 2016 aa19.76■□□□□ 0.75
BRF1-215ENST00000549655 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.75■□□□□ 0.75
BRF1-215ENST00000549655 SRRM3A6NNA2 597 aaPredicted RBP19.75■□□□□ 0.75
BRF1-215ENST00000549655 AVILO75366 819 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 IGLV3-25P01717 112 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 ELK3P41970 407 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 SLC11A1P49279 550 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 PGFP49763 221 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 CCL23P55773 120 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 AP1B1Q10567 949 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 PRKD1Q15139 912 aaPredicted RBP19.75■□□□□ 0.75
BRF1-215ENST00000549655 ARHGEF18Q6ZSZ5 1173 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 TDRPQ86YL5 185 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 IGDCC3Q8IVU1 814 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 CRIPAKQ8N1N5 446 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 CENPTQ96BT3 561 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 B3GALT6Q96L58 329 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 PGLYRP2Q96PD5 576 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 FRMD8Q9BZ67 464 aaPredicted RBP19.75■□□□□ 0.75
BRF1-215ENST00000549655 HIPK3Q9H422 1215 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 MARCH5Q9NX47 278 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 OR12D3Q9UGF7 316 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 RABGEF1Q9UJ41 708 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 CHMP2BQ9UQN3 213 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 SNX10Q9Y5X0 201 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 A0A0A0MRY4 1105 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 CREB1P16220 341 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 MRPL58Q14197 206 aaKnown RBP19.75■□□□□ 0.75
BRF1-215ENST00000549655 TMED2Q15363 201 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 DDR2Q16832 855 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 SDHAF4Q5VUM1 108 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 VSTM1Q6UX27 236 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 FAM43BQ6ZT52 329 aaPredicted RBP19.75■□□□□ 0.75
BRF1-215ENST00000549655 SCD5Q86SK9 330 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 NPAS4Q8IUM7 802 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 CCNYQ8ND76 341 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 P2RY11Q96G91 374 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 SPATA13Q96N96 652 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms