RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 RCOR1Q9UKL0 485 aa12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 CFAP45Q9UL16 551 aa12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 STRIP2Q9ULQ0 834 aa12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 BTBD3Q9Y2F9 522 aa12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 RAXQ9Y2V3 346 aa12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 USP3Q9Y6I4 520 aa12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 TDRD6O60522 2096 aaKnown RBP12.52□□□□□ -0.41
TRAFD1-205ENST00000548277 ATRXP46100 2492 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 FAM149AA5PLN7 773 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 TULP2O00295 520 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 CBFA2T3O75081 653 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 CER1O95813 267 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 PRR29P0C7W0 189 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 ACSL1P33121 698 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 TKTL1P51854 596 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 IL9RQ01113 521 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 PIGZQ86VD9 579 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 FAM186BQ8IYM0 893 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 EDEM1Q92611 657 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 SEMA4DQ92854 862 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 TATDN2Q93075 761 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 LRIG1Q96JA1 1093 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 NIF3L1Q9GZT8 377 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 PNPLA8Q9NP80 782 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 CLIC5Q9NZA1 410 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 GTF3C3Q9Y5Q9 886 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 SNX11Q9Y5W9 270 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 KNTC1P50748 2209 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 ACACAQ13085 2346 aa12.51□□□□□ -0.41
TRAFD1-205ENST00000548277 ASXL3Q9C0F0 2248 aa12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 FSBPO95073 299 aa12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 PFKFB1P16118 471 aa12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 CYP4F3Q08477 520 aa12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 ADAM9Q13443 819 aa12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 ENPP2Q13822 863 aa12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 KIF19Q2TAC6 998 aa12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 CHST9Q7L1S5 443 aa12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 FMNL3Q8IVF7 1028 aa12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 SLC4A11Q8NBS3 891 aa12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 OR2T3Q8NH03 318 aa12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 UBA3Q8TBC4 463 aa12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 TMEM176AQ96HP8 235 aa12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 CDK5RAP1Q96SZ6 601 aaKnown RBP12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 ULBP1Q9BZM6 244 aa12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 DNAI2Q9GZS0 605 aa12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 LHX5Q9H2C1 402 aa12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 MTG2Q9H4K7 406 aa12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 CISHQ9NSE2 258 aa12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 PLA2G4CQ9UP65 541 aa12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 TRAF3IP3Q9Y228 551 aa12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 PKD1L2Q7Z442 2459 aa12.5□□□□□ -0.41
TRAFD1-205ENST00000548277 DMXL2Q8TDJ6 3036 aa12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 ZFYVE26Q68DK2 2539 aa12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 GOLGA6L7A0A1B0GV03 622 aa12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 FAM47DPA6NHR8 397 aa12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 PIK3R2O00459 728 aa12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 NPC1O15118 1278 aa12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 HLA-FP30511 346 aa12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 PSMC2P35998 433 aaKnown RBP12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 ZNF132P52740 706 aa12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 RAD23BP54727 409 aa12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 GOLGA7BQ2TAP0 167 aa12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 SOWAHCQ53LP3 525 aaPredicted RBP12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 PRAMEF14Q5SWL7 426 aa12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 IL27RAQ6UWB1 636 aa12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 INTS8Q75QN2 995 aaKnown RBP12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 ARHGAP18Q8N392 663 aa12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 CPXM2Q8N436 756 aa12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 ZNF276Q8N554 614 aa12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 GANCQ8TET4 914 aa12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 TMA16Q96EY4 203 aaKnown RBP12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 ABCB8Q9NUT2 735 aa12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 TOR4AQ9NXH8 423 aa12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 ANKRD6Q9Y2G4 727 aa12.49□□□□□ -0.41
TRAFD1-205ENST00000548277 TRABD2BA6NFA1 517 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 ZZEF1O43149 2961 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 MSI1O43347 362 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 TIMM44O43615 452 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 ZBED1O96006 694 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 HOXD9P28356 352 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 HARS2P49590 506 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 SGSHP51688 502 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 PDE4CQ08493 712 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 LRMPQ12912 555 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 SUZ12Q15022 739 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 MPPE1Q53F39 396 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 RAB41Q5JT25 222 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 KCNT1Q5JUK3 1230 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 KRT39Q6A163 491 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 RFWD3Q6PCD5 774 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 TMPRSS7Q7RTY8 843 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 ADAT2Q7Z6V5 191 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 GLRX5Q86SX6 157 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 ANKRD52Q8NB46 1076 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 RBBP8NLQ8NC74 664 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 C1orf216Q8TAB5 229 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 RNF139Q8WU17 664 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 CCDC47Q96A33 483 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 PLD4Q96BZ4 506 aa12.48□□□□□ -0.41
TRAFD1-205ENST00000548277 BIRC7Q96CA5 298 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms