RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 SIX5Q8N196 739 aa18.09■□□□□ 0.49
HDAC7-227ENST00000548080 NIPA2Q8N8Q9 360 aa18.09■□□□□ 0.49
HDAC7-227ENST00000548080 MNS1Q8NEH6 495 aa18.09■□□□□ 0.49
HDAC7-227ENST00000548080 MYRIPQ8NFW9 859 aa18.09■□□□□ 0.49
HDAC7-227ENST00000548080 E2F7Q96AV8 911 aa18.09■□□□□ 0.49
HDAC7-227ENST00000548080 ZFRQ96KR1 1074 aaKnown RBP18.09■□□□□ 0.49
HDAC7-227ENST00000548080 C11orf16Q9NQ32 467 aa18.09■□□□□ 0.49
HDAC7-227ENST00000548080 RNF14Q9UBS8 474 aa18.09■□□□□ 0.49
HDAC7-227ENST00000548080 RASAL2Q9UJF2 1139 aa18.09■□□□□ 0.49
HDAC7-227ENST00000548080 ARHGAP26Q9UNA1 814 aa18.09■□□□□ 0.49
HDAC7-227ENST00000548080 PCDHA3Q9Y5H8 950 aa18.09■□□□□ 0.49
HDAC7-227ENST00000548080 WNT6Q9Y6F9 365 aa18.09■□□□□ 0.49
HDAC7-227ENST00000548080 KRBA1A5PL33 1030 aa18.08■□□□□ 0.49
HDAC7-227ENST00000548080 TMEM221A6NGB7 291 aa18.08■□□□□ 0.49
HDAC7-227ENST00000548080 SOBPA7XYQ1 873 aa18.08■□□□□ 0.49
HDAC7-227ENST00000548080 M0R296 226 aa18.08■□□□□ 0.49
HDAC7-227ENST00000548080 FBXO21O94952 628 aa18.08■□□□□ 0.49
HDAC7-227ENST00000548080 ARSAP15289 507 aa18.08■□□□□ 0.49
HDAC7-227ENST00000548080 SOX9P48436 509 aa18.08■□□□□ 0.49
HDAC7-227ENST00000548080 PEX5P50542 639 aa18.08■□□□□ 0.49
HDAC7-227ENST00000548080 RNASE9P60153 205 aaKnown RBP18.08■□□□□ 0.49
HDAC7-227ENST00000548080 ZNF252P-AS1Q0IIN9 211 aa18.08■□□□□ 0.49
HDAC7-227ENST00000548080 FCHO2Q0JRZ9 810 aa18.08■□□□□ 0.49
HDAC7-227ENST00000548080 BSPRYQ5W0U4 402 aa18.08■□□□□ 0.49
HDAC7-227ENST00000548080 BTBD8Q5XKL5 378 aa18.08■□□□□ 0.49
HDAC7-227ENST00000548080 RSRC2Q7L4I2 434 aaKnown RBP18.08■□□□□ 0.49
HDAC7-227ENST00000548080 SLC26A9Q7LBE3 791 aa18.08■□□□□ 0.49
HDAC7-227ENST00000548080 EMC1Q8N766 993 aa18.08■□□□□ 0.49
HDAC7-227ENST00000548080 KIF9Q9HAQ2 790 aa18.08■□□□□ 0.49
HDAC7-227ENST00000548080 CNGB3Q9NQW8 809 aa18.08■□□□□ 0.49
HDAC7-227ENST00000548080 SLC2A4RGQ9NR83 387 aa18.08■□□□□ 0.49
HDAC7-227ENST00000548080 HEBP1Q9NRV9 189 aa18.08■□□□□ 0.49
HDAC7-227ENST00000548080 OBP2AQ9NY56 170 aa18.08■□□□□ 0.49
HDAC7-227ENST00000548080 C2CD4BA6NLJ0 364 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 RALAP11233 206 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 PDGFRAP16234 1089 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 GPD1P21695 349 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 ATP5C1P36542 298 aaKnown RBP18.07■□□□□ 0.48
HDAC7-227ENST00000548080 PAFAH1B1P43034 410 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 TUBP50607 506 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 ZNF143P52747 638 aaPredicted RBP18.07■□□□□ 0.48
HDAC7-227ENST00000548080 TERF1P54274 439 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 TAF5Q15542 800 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 EFHC1Q5JVL4 640 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 CCDC181Q5TID7 509 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 CC2D1AQ6P1N0 951 aaPredicted RBP18.07■□□□□ 0.48
HDAC7-227ENST00000548080 ARCQ7LC44 396 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 RXFP2Q8WXD0 754 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 ALG3Q92685 438 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 KRT35Q92764 455 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 FAM149B1Q96BN6 582 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 CARD9Q9H257 536 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 LINC00597Q9H2U6 94 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 ASNSD1Q9NWL6 643 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 GTSE1Q9NYZ3 720 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 CHADO15335 359 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 CEP104O60308 925 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 GRAP2O75791 330 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 LTFP02788 710 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 CD72P21854 359 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 SSR1P43307 286 aaKnown RBP18.07■□□□□ 0.48
HDAC7-227ENST00000548080 MARCKSL1P49006 195 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 PSEN1P49768 467 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 ACAP1Q15027 740 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 RHOT1Q8IXI2 618 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 ARHGAP18Q8N392 663 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 CNPY3Q9BT09 278 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 KLF16Q9BXK1 252 aaPredicted RBP18.07■□□□□ 0.48
HDAC7-227ENST00000548080 EBF3Q9H4W6 596 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 THG1LQ9NWX6 298 aaKnown RBP18.07■□□□□ 0.48
HDAC7-227ENST00000548080 CLIC5Q9NZA1 410 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 SFMBT1Q9UHJ3 866 aa18.07■□□□□ 0.48
HDAC7-227ENST00000548080 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.07■□□□□ 0.48
HDAC7-227ENST00000548080 CTAGE15A4D2H0 777 aa18.06■□□□□ 0.48
HDAC7-227ENST00000548080 ARNTLO00327 626 aa18.06■□□□□ 0.48
HDAC7-227ENST00000548080 PDE2AO00408 941 aaPredicted RBP18.06■□□□□ 0.48
HDAC7-227ENST00000548080 PSTPIP1O43586 416 aa18.06■□□□□ 0.48
HDAC7-227ENST00000548080 CTAGE8P0CG41 777 aa18.06■□□□□ 0.48
HDAC7-227ENST00000548080 PFKLP17858 780 aa18.06■□□□□ 0.48
HDAC7-227ENST00000548080 FLT3P36888 993 aa18.06■□□□□ 0.48
HDAC7-227ENST00000548080 RWDD2BP57060 319 aa18.06■□□□□ 0.48
HDAC7-227ENST00000548080 TAS2R40P59535 323 aa18.06■□□□□ 0.48
HDAC7-227ENST00000548080 SLC44A4Q53GD3 710 aa18.06■□□□□ 0.48
HDAC7-227ENST00000548080 TRNP1Q6NT89 227 aa18.06■□□□□ 0.48
HDAC7-227ENST00000548080 CTAGE6Q86UF2 777 aa18.06■□□□□ 0.48
HDAC7-227ENST00000548080 CTAGE4Q8IX94 777 aa18.06■□□□□ 0.48
HDAC7-227ENST00000548080 RASGEF1CQ8N431 466 aa18.06■□□□□ 0.48
HDAC7-227ENST00000548080 IRF7Q92985 503 aa18.06■□□□□ 0.48
HDAC7-227ENST00000548080 MS4A14Q96JA4 679 aa18.06■□□□□ 0.48
HDAC7-227ENST00000548080 HPS4Q9NQG7 708 aa18.06■□□□□ 0.48
HDAC7-227ENST00000548080 ARHGEF3Q9NR81 526 aa18.06■□□□□ 0.48
HDAC7-227ENST00000548080 DUS2Q9NX74 493 aaKnown RBP18.06■□□□□ 0.48
HDAC7-227ENST00000548080 DNMT3LQ9UJW3 386 aa18.06■□□□□ 0.48
HDAC7-227ENST00000548080 MYOFQ9NZM1 2061 aa18.05■□□□□ 0.48
HDAC7-227ENST00000548080 OTOL1A6NHN0 477 aaPredicted RBP18.05■□□□□ 0.48
HDAC7-227ENST00000548080 SART1O43290 800 aaKnown RBP18.05■□□□□ 0.48
HDAC7-227ENST00000548080 MSI1O43347 362 aaKnown RBP18.05■□□□□ 0.48
HDAC7-227ENST00000548080 GLI1P08151 1106 aa18.05■□□□□ 0.48
HDAC7-227ENST00000548080 IFNAR2P48551 515 aa18.05■□□□□ 0.48
HDAC7-227ENST00000548080 LRRC38Q5VT99 294 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms