RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 RMND1Q9NWS8 449 aa21.29■■□□□ 1
SSH1-207ENST00000547862 ELOVL2Q9NXB9 296 aa21.29■■□□□ 1
SSH1-207ENST00000547862 USP36Q9P275 1121 aaKnown RBP21.29■■□□□ 1
SSH1-207ENST00000547862 NUMA1Q14980 2115 aa21.28■■□□□ 1
SSH1-207ENST00000547862 LCP1P13796 627 aa21.28■■□□□ 1
SSH1-207ENST00000547862 HARS2P49590 506 aaKnown RBP21.28■■□□□ 1
SSH1-207ENST00000547862 PMS1P54277 932 aaKnown RBP21.28■■□□□ 1
SSH1-207ENST00000547862 FNDC3BQ53EP0 1204 aaKnown RBP21.28■■□□□ 1
SSH1-207ENST00000547862 TMPRSS6Q8IU80 811 aa21.28■■□□□ 1
SSH1-207ENST00000547862 CPXM2Q8N436 756 aa21.28■■□□□ 1
SSH1-207ENST00000547862 CYB5D2Q8WUJ1 264 aa21.28■■□□□ 1
SSH1-207ENST00000547862 PRCCQ92733 491 aaPredicted RBP21.28■■□□□ 1
SSH1-207ENST00000547862 OLA1Q9NTK5 396 aaKnown RBP21.28■■□□□ 1
SSH1-207ENST00000547862 WSB2Q9NYS7 404 aaPredicted RBP21.28■■□□□ 1
SSH1-207ENST00000547862 NYNRINQ9P2P1 1898 aaKnown RBP21.27■■□□□ 1
SSH1-207ENST00000547862 SLC16A3O15427 465 aaKnown RBP21.27■■□□□ 1
SSH1-207ENST00000547862 SH3BP5O60239 455 aa21.27■■□□□ 1
SSH1-207ENST00000547862 CD59P13987 128 aa21.27■■□□□ 1
SSH1-207ENST00000547862 HOXD9P28356 352 aaPredicted RBP21.27■■□□□ 1
SSH1-207ENST00000547862 RGS7P49802 495 aa21.27■■□□□ 1
SSH1-207ENST00000547862 TPMTP51580 245 aa21.27■■□□□ 1
SSH1-207ENST00000547862 YWHAEP62258 255 aaKnown RBP21.27■■□□□ 1
SSH1-207ENST00000547862 ZNF658Q5TYW1 1059 aaPredicted RBP21.27■■□□□ 1
SSH1-207ENST00000547862 DCAF12L1Q5VU92 463 aa21.27■■□□□ 1
SSH1-207ENST00000547862 TMEM215Q68D42 235 aa21.27■■□□□ 1
SSH1-207ENST00000547862 CHCHD4Q8N4Q1 142 aa21.27■■□□□ 1
SSH1-207ENST00000547862 FAXDC2Q96IV6 333 aa21.27■■□□□ 1
SSH1-207ENST00000547862 UBXN6Q9BZV1 441 aa21.27■■□□□ 1
SSH1-207ENST00000547862 DNAAF2Q9NVR5 837 aaKnown RBP21.27■■□□□ 1
SSH1-207ENST00000547862 CHD6Q8TD26 2715 aa21.27■□□□□ 0.99
SSH1-207ENST00000547862 YJEFN3A6XGL0 299 aa21.26■□□□□ 0.99
SSH1-207ENST00000547862 UPK3BL1B0FP48 263 aa21.26■□□□□ 0.99
SSH1-207ENST00000547862 UPK3BL2E5RIL1 263 aa21.26■□□□□ 0.99
SSH1-207ENST00000547862 E7ENQ6 273 aa21.26■□□□□ 0.99
SSH1-207ENST00000547862 NPC1O15118 1278 aa21.26■□□□□ 0.99
SSH1-207ENST00000547862 COPAP53621 1224 aa21.26■□□□□ 0.99
SSH1-207ENST00000547862 EIF4HQ15056 248 aaKnown RBP21.26■□□□□ 0.99
SSH1-207ENST00000547862 TRIP4Q15650 581 aaPredicted RBP21.26■□□□□ 0.99
SSH1-207ENST00000547862 MPPE1Q53F39 396 aa21.26■□□□□ 0.99
SSH1-207ENST00000547862 BSPRYQ5W0U4 402 aa21.26■□□□□ 0.99
SSH1-207ENST00000547862 ANKRD40Q6AI12 368 aa21.26■□□□□ 0.99
SSH1-207ENST00000547862 CHST9Q7L1S5 443 aa21.26■□□□□ 0.99
SSH1-207ENST00000547862 NAXDQ8IW45 347 aa21.26■□□□□ 0.99
SSH1-207ENST00000547862 ARMCX3Q9UH62 379 aaPredicted RBP21.26■□□□□ 0.99
SSH1-207ENST00000547862 NEUROG3Q9Y4Z2 214 aa21.26■□□□□ 0.99
SSH1-207ENST00000547862 PCDHB9Q9Y5E1 797 aa21.26■□□□□ 0.99
SSH1-207ENST00000547862 ASPMQ8IZT6 3477 aa21.26■□□□□ 0.99
SSH1-207ENST00000547862 A0A1B0GTW7 788 aa21.25■□□□□ 0.99
SSH1-207ENST00000547862 CALCAP01258 141 aa21.25■□□□□ 0.99
SSH1-207ENST00000547862 SGSHP51688 502 aa21.25■□□□□ 0.99
SSH1-207ENST00000547862 ENPP2Q13822 863 aa21.25■□□□□ 0.99
SSH1-207ENST00000547862 PM20D1Q6GTS8 502 aa21.25■□□□□ 0.99
SSH1-207ENST00000547862 ISM2Q6H9L7 571 aa21.25■□□□□ 0.99
SSH1-207ENST00000547862 FAM217AQ8IXS0 508 aa21.25■□□□□ 0.99
SSH1-207ENST00000547862 ITM2CQ9NQX7 267 aa21.25■□□□□ 0.99
SSH1-207ENST00000547862 ABCB8Q9NUT2 735 aa21.25■□□□□ 0.99
SSH1-207ENST00000547862 HBS1LQ9Y450 684 aaKnown RBP21.25■□□□□ 0.99
SSH1-207ENST00000547862 GOLGA6L4A6NEF3 574 aa21.24■□□□□ 0.99
SSH1-207ENST00000547862 M0QYV0 167 aa21.24■□□□□ 0.99
SSH1-207ENST00000547862 O00370 1275 aa21.24■□□□□ 0.99
SSH1-207ENST00000547862 SETSIPP0DME0 302 aa21.24■□□□□ 0.99
SSH1-207ENST00000547862 VDRP11473 427 aa21.24■□□□□ 0.99
SSH1-207ENST00000547862 HLA-FP30511 346 aa21.24■□□□□ 0.99
SSH1-207ENST00000547862 RDXP35241 583 aaKnown RBP21.24■□□□□ 0.99
SSH1-207ENST00000547862 FKBP3Q00688 224 aaKnown RBP21.24■□□□□ 0.99
SSH1-207ENST00000547862 TMEM270Q6UE05 265 aa21.24■□□□□ 0.99
SSH1-207ENST00000547862 FMR1NBQ8N0W7 255 aaPredicted RBP21.24■□□□□ 0.99
SSH1-207ENST00000547862 KDF1Q8NAX2 398 aaPredicted RBP21.24■□□□□ 0.99
SSH1-207ENST00000547862 SMARCE1Q969G3 411 aa21.24■□□□□ 0.99
SSH1-207ENST00000547862 SLC35C1Q96A29 364 aa21.24■□□□□ 0.99
SSH1-207ENST00000547862 SLC2A11Q9BYW1 496 aa21.24■□□□□ 0.99
SSH1-207ENST00000547862 LHX5Q9H2C1 402 aa21.24■□□□□ 0.99
SSH1-207ENST00000547862 IL21RQ9HBE5 538 aa21.24■□□□□ 0.99
SSH1-207ENST00000547862 EIF2B4Q9UI10 523 aaKnown RBP21.24■□□□□ 0.99
SSH1-207ENST00000547862 PCDHB4Q9Y5E5 795 aa21.24■□□□□ 0.99
SSH1-207ENST00000547862 TMEM8BA6NDV4 472 aa21.23■□□□□ 0.99
SSH1-207ENST00000547862 SMC2O95347 1197 aa21.23■□□□□ 0.99
SSH1-207ENST00000547862 TBXAS1P24557 533 aaPredicted RBP21.23■□□□□ 0.99
SSH1-207ENST00000547862 BRD2P25440 801 aaKnown RBP21.23■□□□□ 0.99
SSH1-207ENST00000547862 OXTRP30559 389 aa21.23■□□□□ 0.99
SSH1-207ENST00000547862 ZNF132P52740 706 aa21.23■□□□□ 0.99
SSH1-207ENST00000547862 DAOAP59103 153 aa21.23■□□□□ 0.99
SSH1-207ENST00000547862 E2F5Q15329 346 aa21.23■□□□□ 0.99
SSH1-207ENST00000547862 CCDC40Q4G0X9 1142 aa21.23■□□□□ 0.99
SSH1-207ENST00000547862 RFWD3Q6PCD5 774 aa21.23■□□□□ 0.99
SSH1-207ENST00000547862 METTL3Q86U44 580 aaKnown RBP21.23■□□□□ 0.99
SSH1-207ENST00000547862 ZC3H3Q8IXZ2 948 aaKnown RBP21.23■□□□□ 0.99
SSH1-207ENST00000547862 PPM1KQ8N3J5 372 aa21.23■□□□□ 0.99
SSH1-207ENST00000547862 PNPLA1Q8N8W4 532 aa21.23■□□□□ 0.99
SSH1-207ENST00000547862 RBBP8NLQ8NC74 664 aaPredicted RBP21.23■□□□□ 0.99
SSH1-207ENST00000547862 OR2T3Q8NH03 318 aa21.23■□□□□ 0.99
SSH1-207ENST00000547862 WFDC5Q8TCV5 224 aa21.23■□□□□ 0.99
SSH1-207ENST00000547862 TFAP2BQ92481 460 aa21.23■□□□□ 0.99
SSH1-207ENST00000547862 ABCC13Q9NSE7 274 aa21.23■□□□□ 0.99
SSH1-207ENST00000547862 GGA2Q9UJY4 613 aa21.23■□□□□ 0.99
SSH1-207ENST00000547862 COQ4Q9Y3A0 265 aa21.23■□□□□ 0.99
SSH1-207ENST00000547862 WDFY3Q8IZQ1 3526 aa21.23■□□□□ 0.99
SSH1-207ENST00000547862 PLXNA2O75051 1894 aa21.22■□□□□ 0.99
SSH1-207ENST00000547862 BCAT2O15382 392 aaPredicted RBP21.22■□□□□ 0.99
SSH1-207ENST00000547862 GJB3O75712 270 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms