RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 YIPF3Q9GZM5 350 aa17.08■□□□□ 0.32
BRF1-208ENST00000546997 ETNK1Q9HBU6 452 aa17.08■□□□□ 0.32
BRF1-208ENST00000546997 LCHNA4D1U4 455 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 ENO4A6NNW6 628 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 A8MUI8 341 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 PEX11AO75192 247 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 TPBGLP0DKB5 382 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 SETSIPP0DME0 302 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 LAG3P18627 525 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 ITIH2P19823 946 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 GABRB2P47870 512 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 KLC1Q07866 573 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 SLC5A9Q2M3M2 681 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 CTXN3Q4LDR2 81 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 DNAJC24Q6P3W2 148 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 PRSS55Q6UWB4 352 aaPredicted RBP17.07■□□□□ 0.32
BRF1-208ENST00000546997 RSPO2Q6UXX9 243 aaPredicted RBP17.07■□□□□ 0.32
BRF1-208ENST00000546997 CCDC105Q8IYK2 499 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 KATNAL2Q8IYT4 538 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 RIBC1Q8N443 379 aaPredicted RBP17.07■□□□□ 0.32
BRF1-208ENST00000546997 MAIP1Q8WWC4 291 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 CCDC97Q96F63 343 aaPredicted RBP17.07■□□□□ 0.32
BRF1-208ENST00000546997 TGS1Q96RS0 853 aaKnown RBP17.07■□□□□ 0.32
BRF1-208ENST00000546997 KCNK16Q96T55 309 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 HERPUD2Q9BSE4 406 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 TTPALQ9BTX7 342 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 SLC4A5Q9BY07 1137 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 VCXQ9H320 206 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 NKIRAS1Q9NYS0 192 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 USTQ9Y2C2 406 aa17.07■□□□□ 0.32
BRF1-208ENST00000546997 GOLGA8SH3BPF8 625 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 DCTN3O75935 186 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 RTN3O95197 1032 aaPredicted RBP17.06■□□□□ 0.32
BRF1-208ENST00000546997 GSTA2P09210 222 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 FAM200BP0CF97 657 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 STX2P32856 288 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 KCNJ1P48048 391 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 TAP1Q03518 808 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 ZNF252P-AS1Q0IIN9 211 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 NR1H3Q13133 447 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 SLC39A12Q504Y0 691 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 C9orf50Q5SZB4 431 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 ZNF280DQ6N043 979 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 IRGCQ6NXR0 463 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 PIGZQ86VD9 579 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 MCEEQ96PE7 176 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 SLC9A7Q96T83 725 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 SMOQ99835 787 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 ZCWPW1Q9H0M4 648 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 STRIP2Q9ULQ0 834 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 INSL6Q9Y581 213 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 USH1CQ9Y6N9 552 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 DPPA5A6NC42 116 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 XPO1O14980 1071 aaKnown RBP17.06■□□□□ 0.32
BRF1-208ENST00000546997 AP1G2O75843 785 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 BDNFP23560 247 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 ALDH3A1P30838 453 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 SSR1P43307 286 aaKnown RBP17.06■□□□□ 0.32
BRF1-208ENST00000546997 SLCO1A2P46721 670 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 RPS6KA3P51812 740 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 MAP3K7CLP57077 242 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 IL9RQ01113 521 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 RASIP1Q5U651 963 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 DCUN1D2Q6PH85 259 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 RHBDF2Q6PJF5 856 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 CEP128Q6ZU80 1094 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 FAM183BPQ6ZVS7 135 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 TMEM110Q86TL2 294 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 RELL1Q8IUW5 271 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 ZMIZ2Q8NF64 920 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 EXD1Q8NHP7 514 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 C1orf54Q8WWF1 131 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 UTP4Q969X6 686 aaKnown RBP17.06■□□□□ 0.32
BRF1-208ENST00000546997 TMEM169Q96HH4 297 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 RMDN2Q96LZ7 410 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 TRAPPC9Q96Q05 1148 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 CDC42EP4Q9H3Q1 356 aaKnown RBP17.06■□□□□ 0.32
BRF1-208ENST00000546997 TLE6Q9H808 572 aa17.06■□□□□ 0.32
BRF1-208ENST00000546997 MYO7AQ13402 2215 aa17.05■□□□□ 0.32
BRF1-208ENST00000546997 TTC4O95801 387 aa17.05■□□□□ 0.32
BRF1-208ENST00000546997 BRAFP15056 766 aa17.05■□□□□ 0.32
BRF1-208ENST00000546997 PCK1P35558 622 aa17.05■□□□□ 0.32
BRF1-208ENST00000546997 RPL34P49207 117 aaKnown RBP17.05■□□□□ 0.32
BRF1-208ENST00000546997 MXRA7P84157 204 aa17.05■□□□□ 0.32
BRF1-208ENST00000546997 OGDHQ02218 1023 aa17.05■□□□□ 0.32
BRF1-208ENST00000546997 KLF1Q13351 362 aaPredicted RBP17.05■□□□□ 0.32
BRF1-208ENST00000546997 USP41Q3LFD5 358 aa17.05■□□□□ 0.32
BRF1-208ENST00000546997 SCUBE3Q8IX30 993 aa17.05■□□□□ 0.32
BRF1-208ENST00000546997 FIBCD1Q8N539 461 aa17.05■□□□□ 0.32
BRF1-208ENST00000546997 SMARCD1Q96GM5 515 aa17.05■□□□□ 0.32
BRF1-208ENST00000546997 DCLRE1BQ9H816 532 aa17.05■□□□□ 0.32
BRF1-208ENST00000546997 PAPSS1O43252 624 aaPredicted RBP17.04■□□□□ 0.32
BRF1-208ENST00000546997 TBC1D4O60343 1298 aa17.04■□□□□ 0.32
BRF1-208ENST00000546997 SMIM24O75264 130 aa17.04■□□□□ 0.32
BRF1-208ENST00000546997 ECEL1O95672 775 aa17.04■□□□□ 0.32
BRF1-208ENST00000546997 RALAP11233 206 aa17.04■□□□□ 0.32
BRF1-208ENST00000546997 MAGEA10P43363 369 aaPredicted RBP17.04■□□□□ 0.32
BRF1-208ENST00000546997 MGAT5Q09328 741 aa17.04■□□□□ 0.32
BRF1-208ENST00000546997 MAPRE1Q15691 268 aaKnown RBP17.04■□□□□ 0.32
BRF1-208ENST00000546997 CGB2Q6NT52 195 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms