RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 GTF2A1LQ9UNN4 478 aa6.92□□□□□ -1.3
NPAS3-204ENST00000546849 FER1L4A9Z1Z3 1794 aa6.92□□□□□ -1.3
NPAS3-204ENST00000546849 CECR2Q9BXF3 1484 aa6.92□□□□□ -1.3
NPAS3-204ENST00000546849 CCDC180Q9P1Z9 1646 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 GXYLT2A0PJZ3 443 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 PRAMEF2O60811 474 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 RNF8O76064 485 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 MT-CO3P00414 261 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 APEHP13798 732 aaKnown RBP6.91□□□□□ -1.3
NPAS3-204ENST00000546849 DUSP1P28562 367 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 RBM5P52756 815 aaKnown RBP eCLIP6.91□□□□□ -1.3
NPAS3-204ENST00000546849 PNLIPRP1P54315 467 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 PRKAA2P54646 552 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 WDR5P61964 334 aaKnown RBP6.91□□□□□ -1.3
NPAS3-204ENST00000546849 GPC5P78333 572 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 CUL4BQ13620 913 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 SYNE3Q6ZMZ3 975 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 MOGAT3Q86VF5 341 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 PAF1Q8N7H5 531 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 SLC16A11Q8NCK7 471 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 SIMC1Q8NDZ2 872 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 SRFBP1Q8NEF9 429 aaKnown RBP6.91□□□□□ -1.3
NPAS3-204ENST00000546849 CSGALNACT1Q8TDX6 532 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 NPIPB3Q92617 1050 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 MCRS1Q96EZ8 462 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 PRR11Q96HE9 360 aaPredicted RBP6.91□□□□□ -1.3
NPAS3-204ENST00000546849 BBC3Q96PG8 261 aaPredicted RBP6.91□□□□□ -1.3
NPAS3-204ENST00000546849 TIMP4Q99727 224 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 DDX23Q9BUQ8 820 aaKnown RBP6.91□□□□□ -1.3
NPAS3-204ENST00000546849 SCAND2PQ9GZW5 306 aaPredicted RBP6.91□□□□□ -1.3
NPAS3-204ENST00000546849 ABHD10Q9NUJ1 306 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 TMLHEQ9NVH6 421 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 MAFFQ9ULX9 164 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 ZBTB1Q9Y2K1 713 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 GPR52Q9Y2T5 361 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 DMRT1Q9Y5R6 373 aa6.91□□□□□ -1.3
NPAS3-204ENST00000546849 FAM90A18PA6NE21 464 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 FAM90A16PA6NEW6 464 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 FAM90A9PA6NNJ1 464 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 FAM90A5PA8MXJ8 464 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 E7EVH7 732 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 H7C1Q1 480 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 FYB1O15117 783 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 ALDOAP04075 364 aaKnown RBP6.9□□□□□ -1.3
NPAS3-204ENST00000546849 FAM90A15PP0C7V4 464 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 FAM90A14PP0C7W9 464 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 RXRAP19793 462 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 SLC8A1P32418 973 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 PCP4P48539 62 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 MCM2P49736 904 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 ACTR2P61160 394 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 TTC22Q5TAA0 569 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 SYT13Q7L8C5 426 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 BCDIN3DQ7Z5W3 292 aaKnown RBP6.9□□□□□ -1.3
NPAS3-204ENST00000546849 TMEM57Q8N5G2 664 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 SPPL3Q8TCT6 385 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 GLMPQ8WWB7 406 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 AKAP1Q92667 903 aaKnown RBP eCLIP6.9□□□□□ -1.3
NPAS3-204ENST00000546849 SARAFQ96BY9 339 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 EDC3Q96F86 508 aaKnown RBP6.9□□□□□ -1.3
NPAS3-204ENST00000546849 HIC2Q96JB3 615 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 MECRQ9BV79 373 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 RNF26Q9BY78 433 aaPredicted RBP6.9□□□□□ -1.3
NPAS3-204ENST00000546849 TRIM2Q9C040 744 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 PCED1AQ9H1Q7 454 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 CDCP1Q9H5V8 836 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 ARL8BQ9NVJ2 186 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 RRN3Q9NYV6 651 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 FZD4Q9ULV1 537 aa6.9□□□□□ -1.3
NPAS3-204ENST00000546849 RRP7AQ9Y3A4 280 aaKnown RBP6.9□□□□□ -1.3
NPAS3-204ENST00000546849 C3orf70A6NLC5 250 aaPredicted RBP6.89□□□□□ -1.31
NPAS3-204ENST00000546849 SLC38A8A6NNN8 435 aa6.89□□□□□ -1.31
NPAS3-204ENST00000546849 TARM1B6A8C7 271 aa6.89□□□□□ -1.31
NPAS3-204ENST00000546849 BTBD19C9JJ37 291 aa6.89□□□□□ -1.31
NPAS3-204ENST00000546849 CLIC1O00299 241 aa6.89□□□□□ -1.31
NPAS3-204ENST00000546849 EIF3FO00303 357 aaPredicted RBP6.89□□□□□ -1.31
NPAS3-204ENST00000546849 NKX2-8O15522 239 aa6.89□□□□□ -1.31
NPAS3-204ENST00000546849 SEPT4O43236 478 aa6.89□□□□□ -1.31
NPAS3-204ENST00000546849 WT1P19544 449 aaPredicted RBP6.89□□□□□ -1.31
NPAS3-204ENST00000546849 VPS41P49754 854 aa6.89□□□□□ -1.31
NPAS3-204ENST00000546849 RBM6P78332 1123 aaKnown RBP6.89□□□□□ -1.31
NPAS3-204ENST00000546849 PFKFB3Q16875 520 aaPredicted RBP6.89□□□□□ -1.31
NPAS3-204ENST00000546849 FBXO47Q5MNV8 452 aa6.89□□□□□ -1.31
NPAS3-204ENST00000546849 DGAT2L7PQ6IED9 249 aa6.89□□□□□ -1.31
NPAS3-204ENST00000546849 GPR150Q8NGU9 434 aa6.89□□□□□ -1.31
NPAS3-204ENST00000546849 CEP70Q8NHQ1 597 aa6.89□□□□□ -1.31
NPAS3-204ENST00000546849 ADAMTS18Q8TE60 1221 aa6.89□□□□□ -1.31
NPAS3-204ENST00000546849 PRDM16Q9HAZ2 1276 aa6.89□□□□□ -1.31
NPAS3-204ENST00000546849 KCNK9Q9NPC2 374 aa6.89□□□□□ -1.31
NPAS3-204ENST00000546849 SLC12A4Q9UP95 1085 aa6.89□□□□□ -1.31
NPAS3-204ENST00000546849 HEMK1Q9Y5R4 338 aaPredicted RBP6.89□□□□□ -1.31
NPAS3-204ENST00000546849 RB1CC1Q8TDY2 1594 aa6.88□□□□□ -1.31
NPAS3-204ENST00000546849 MBD3L5A6NJ08 208 aaPredicted RBP6.88□□□□□ -1.31
NPAS3-204ENST00000546849 M0QYT0 321 aa6.88□□□□□ -1.31
NPAS3-204ENST00000546849 ZNF213O14771 459 aa6.88□□□□□ -1.31
NPAS3-204ENST00000546849 PROZP22891 400 aa6.88□□□□□ -1.31
NPAS3-204ENST00000546849 CDK7P50613 346 aa6.88□□□□□ -1.31
NPAS3-204ENST00000546849 TAS2R50P59544 299 aa6.88□□□□□ -1.31
NPAS3-204ENST00000546849 TLE3Q04726 772 aa6.88□□□□□ -1.31
NPAS3-204ENST00000546849 PDCLQ13371 301 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms