RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ZMYND15Q9H091 742 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 PRDM12Q9H4Q4 367 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 WDR6Q9NNW5 1121 aaKnown RBP12.38□□□□□ -0.43
CCDC38-202ENST00000546386 OR12D3Q9UGF7 316 aa12.38□□□□□ -0.43
CCDC38-202ENST00000546386 TRDMT1O14717 391 aaKnown RBP12.37□□□□□ -0.43
CCDC38-202ENST00000546386 UGT1A9O60656 530 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 ENDOD1O94919 500 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 ERCC2P18074 760 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 LSP1P33241 339 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 ACADSBP45954 432 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 RAB27AP51159 221 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 SESN2P58004 480 aaPredicted RBP12.37□□□□□ -0.43
CCDC38-202ENST00000546386 YWHAGP61981 247 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCDC38-202ENST00000546386 FAAP100Q0VG06 881 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 CASC4Q6P4E1 433 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 PRPF39Q86UA1 669 aaKnown RBP12.37□□□□□ -0.43
CCDC38-202ENST00000546386 SHROOM3Q8TF72 1996 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 CENPIQ92674 756 aaPredicted RBP12.37□□□□□ -0.43
CCDC38-202ENST00000546386 ARHGEF2Q92974 986 aaKnown RBP12.37□□□□□ -0.43
CCDC38-202ENST00000546386 ACBD6Q9BR61 282 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 UGT1A7Q9HAW7 530 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 UGT1A10Q9HAW8 530 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 UGT1A8Q9HAW9 530 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 DFFAO00273 331 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 CABYRO75952 493 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 RDXP35241 583 aaKnown RBP12.37□□□□□ -0.43
CCDC38-202ENST00000546386 ADRA1BP35368 520 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 ACTN2P35609 894 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 GSCP56915 257 aaPredicted RBP12.37□□□□□ -0.43
CCDC38-202ENST00000546386 PKN2Q16513 984 aaKnown RBP12.37□□□□□ -0.43
CCDC38-202ENST00000546386 QPCTQ16769 361 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 OTOP2Q7RTS6 562 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 THEM5Q8N1Q8 247 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 TMEM86AQ8N2M4 240 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 ZCCHC9Q8N567 271 aaKnown RBP12.37□□□□□ -0.43
CCDC38-202ENST00000546386 PDCD7Q8N8D1 485 aaKnown RBP12.37□□□□□ -0.43
CCDC38-202ENST00000546386 SUSD3Q96L08 255 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 CASD1Q96PB1 797 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 PCDH9Q9HC56 1237 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 DMAP1Q9NPF5 467 aaPredicted RBP12.37□□□□□ -0.43
CCDC38-202ENST00000546386 CDY1Q9Y6F8 540 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 RALGAPA2Q2PPJ7 1873 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 COL6A3P12111 3177 aa12.37□□□□□ -0.43
CCDC38-202ENST00000546386 CLUHO75153 1309 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.36□□□□□ -0.43
CCDC38-202ENST00000546386 WDR91A4D1P6 747 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 ALDH2P05091 517 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 PTPN9P43378 593 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 PPP2R2AP63151 447 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 EFEMP1Q12805 493 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 DPYSL2Q16555 572 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 FAM171BQ6P995 826 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 PPP1R21Q6ZMI0 780 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 RPAINQ86UA6 219 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 PALM2Q8IXS6 379 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 NAT8LQ8N9F0 302 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 URGCPQ8TCY9 931 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 DQX1Q8TE96 717 aaKnown RBP12.36□□□□□ -0.43
CCDC38-202ENST00000546386 FBF1Q8TES7 1133 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 ATXN3LQ9H3M9 355 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 UBN1Q9NPG3 1134 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 ADAM28Q9UKQ2 775 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 HMGB1P1B2RPK0 211 aaPredicted RBP12.36□□□□□ -0.43
CCDC38-202ENST00000546386 GOLGA8TH3BQL2 631 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 LRIG2O94898 1065 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 TPH1P17752 444 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 MDH1P40925 334 aaKnown RBP12.36□□□□□ -0.43
CCDC38-202ENST00000546386 ABCG1P45844 678 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 TFDP2Q14188 446 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 ZKSCAN8Q15776 578 aaPredicted RBP12.36□□□□□ -0.43
CCDC38-202ENST00000546386 TAZQ16635 292 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 EFHC2Q5JST6 749 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 HEATR6Q6AI08 1181 aaKnown RBP12.36□□□□□ -0.43
CCDC38-202ENST00000546386 RFX8Q6ZV50 586 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 SCD5Q86SK9 330 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 P2RY11Q96G91 374 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 PAWRQ96IZ0 340 aaKnown RBP12.36□□□□□ -0.43
CCDC38-202ENST00000546386 GMIPQ9P107 970 aa12.36□□□□□ -0.43
CCDC38-202ENST00000546386 DRG1Q9Y295 367 aaKnown RBP12.36□□□□□ -0.43
CCDC38-202ENST00000546386 M0QZQ0 153 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 DPYSL4O14531 572 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 TOP3BO95985 862 aaKnown RBP12.35□□□□□ -0.43
CCDC38-202ENST00000546386 CSF2RAP15509 400 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 DESP17661 470 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 KRT15P19012 456 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 GCAP28676 217 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 CDK7P50613 346 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 TPI1P60174 286 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 LMNB2Q03252 620 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 ACAP1Q15027 740 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 PDK2Q15119 407 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 FAM26DQ5JW98 314 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 BTBD8Q5XKL5 378 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 SLC9A4Q6AI14 798 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 ZNF354CQ86Y25 554 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 CTAGE3PQ8IX95 158 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 PPIL6Q8IXY8 311 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 ST13P5Q8NFI4 369 aaPredicted RBP12.35□□□□□ -0.43
CCDC38-202ENST00000546386 ATXN7L3BQ96GX2 97 aa12.35□□□□□ -0.43
CCDC38-202ENST00000546386 STAP1Q9ULZ2 295 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms