RNA–Protein interactions for RNA: ENST00000546337.1

SCRIB-208, Transcript of scribbled planar cell polarity protein, humanhuman

TSL 3

Gene SCRIB, Length 516 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-208ENST00000546337 C3orf20Q8ND61 904 aa16.33■□□□□ 0.2
SCRIB-208ENST00000546337 TMA16Q96EY4 203 aaKnown RBP16.33■□□□□ 0.2
SCRIB-208ENST00000546337 PIWIL1Q96J94 861 aaKnown RBP16.33■□□□□ 0.2
SCRIB-208ENST00000546337 FAM126AQ9BYI3 521 aaPredicted RBP16.33■□□□□ 0.2
SCRIB-208ENST00000546337 HAUS4Q9H6D7 363 aa16.33■□□□□ 0.2
SCRIB-208ENST00000546337 TICRRQ7Z2Z1 1910 aa16.33■□□□□ 0.2
SCRIB-208ENST00000546337 CACNA1HO95180 2353 aa16.33■□□□□ 0.2
SCRIB-208ENST00000546337 SIGLEC16A6NMB1 481 aa16.32■□□□□ 0.2
SCRIB-208ENST00000546337 TULP3O75386 442 aa16.32■□□□□ 0.2
SCRIB-208ENST00000546337 GYPCP04921 128 aa16.32■□□□□ 0.2
SCRIB-208ENST00000546337 KRT3P12035 628 aa16.32■□□□□ 0.2
SCRIB-208ENST00000546337 TYRP14679 529 aa16.32■□□□□ 0.2
SCRIB-208ENST00000546337 COL9A1P20849 921 aa16.32■□□□□ 0.2
SCRIB-208ENST00000546337 ABCB4P21439 1286 aa16.32■□□□□ 0.2
SCRIB-208ENST00000546337 HOXA6P31267 233 aa16.32■□□□□ 0.2
SCRIB-208ENST00000546337 CCR3P51677 355 aa16.32■□□□□ 0.2
SCRIB-208ENST00000546337 FYB2Q5VWT5 728 aa16.32■□□□□ 0.2
SCRIB-208ENST00000546337 RNF43Q68DV7 783 aa16.32■□□□□ 0.2
SCRIB-208ENST00000546337 MMS22LQ6ZRQ5 1243 aa16.32■□□□□ 0.2
SCRIB-208ENST00000546337 MON1BQ7L1V2 547 aa16.32■□□□□ 0.2
SCRIB-208ENST00000546337 ZNF571Q7Z3V5 609 aaPredicted RBP16.32■□□□□ 0.2
SCRIB-208ENST00000546337 MCOLN2Q8IZK6 566 aa16.32■□□□□ 0.2
SCRIB-208ENST00000546337 OR8K1Q8NGG5 319 aa16.32■□□□□ 0.2
SCRIB-208ENST00000546337 SLC30A5Q8TAD4 765 aa16.32■□□□□ 0.2
SCRIB-208ENST00000546337 TRIM11Q96F44 468 aa16.32■□□□□ 0.2
SCRIB-208ENST00000546337 FAM204AQ9H8W3 233 aa16.32■□□□□ 0.2
SCRIB-208ENST00000546337 FBRSL1Q9HCM7 1045 aaKnown RBP16.32■□□□□ 0.2
SCRIB-208ENST00000546337 ARHGEF4Q9NR80 690 aa16.32■□□□□ 0.2
SCRIB-208ENST00000546337 SEPT11Q9NVA2 429 aaKnown RBP16.32■□□□□ 0.2
SCRIB-208ENST00000546337 DDIT4Q9NX09 232 aa16.32■□□□□ 0.2
SCRIB-208ENST00000546337 STARD13Q9Y3M8 1113 aa16.32■□□□□ 0.2
SCRIB-208ENST00000546337 ANKRD62A6NC57 917 aa16.31■□□□□ 0.2
SCRIB-208ENST00000546337 KCNU1A8MYU2 1149 aa16.31■□□□□ 0.2
SCRIB-208ENST00000546337 NPC1O15118 1278 aa16.31■□□□□ 0.2
SCRIB-208ENST00000546337 MSI1O43347 362 aaKnown RBP16.31■□□□□ 0.2
SCRIB-208ENST00000546337 LAMTOR5O43504 91 aa16.31■□□□□ 0.2
SCRIB-208ENST00000546337 RTN2O75298 545 aa16.31■□□□□ 0.2
SCRIB-208ENST00000546337 KAT7O95251 611 aa16.31■□□□□ 0.2
SCRIB-208ENST00000546337 PTPN9P43378 593 aa16.31■□□□□ 0.2
SCRIB-208ENST00000546337 CXCR3P49682 368 aa16.31■□□□□ 0.2
SCRIB-208ENST00000546337 HGSNATQ68CP4 663 aa16.31■□□□□ 0.2
SCRIB-208ENST00000546337 GRAMD4Q6IC98 578 aa16.31■□□□□ 0.2
SCRIB-208ENST00000546337 BNIPLQ7Z465 357 aa16.31■□□□□ 0.2
SCRIB-208ENST00000546337 PHTF2Q8N3S3 785 aa16.31■□□□□ 0.2
SCRIB-208ENST00000546337 ACDQ96AP0 544 aa16.31■□□□□ 0.2
SCRIB-208ENST00000546337 C11orf70Q9BRQ4 267 aa16.31■□□□□ 0.2
SCRIB-208ENST00000546337 TRIM5Q9C035 493 aa16.31■□□□□ 0.2
SCRIB-208ENST00000546337 ZNHIT6Q9NWK9 470 aaKnown RBP16.31■□□□□ 0.2
SCRIB-208ENST00000546337 TYW5A2RUC4 315 aaKnown RBP16.3■□□□□ 0.2
SCRIB-208ENST00000546337 NEDD8-MDP1E9PL57 170 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 M0QYT0 321 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 SCAMP3O14828 347 aaKnown RBP16.3■□□□□ 0.2
SCRIB-208ENST00000546337 TIMM44O43615 452 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 GRAP2O75791 330 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 CISD3P0C7P0 127 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 MYBL1P10243 752 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 DESP17661 470 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 CASP14P31944 242 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 CXCL12P48061 93 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 NRLP54845 237 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 RNASE9P60153 205 aaKnown RBP16.3■□□□□ 0.2
SCRIB-208ENST00000546337 ZC3H12AQ5D1E8 599 aaKnown RBP16.3■□□□□ 0.2
SCRIB-208ENST00000546337 PIK3R6Q5UE93 754 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 TPGS1Q6ZTW0 290 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 STRADAQ7RTN6 431 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 DDI1Q8WTU0 396 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 CPLX3Q8WVH0 158 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 RNF34Q969K3 372 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 C1orf74Q96LT6 269 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 DNAJC7Q99615 494 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 SELENOOQ9BVL4 669 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 ISCUQ9H1K1 167 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 WDCPQ9H6R7 721 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 PARVAQ9NVD7 372 aa16.3■□□□□ 0.2
SCRIB-208ENST00000546337 SPATA6Q9NWH7 488 aaPredicted RBP16.3■□□□□ 0.2
SCRIB-208ENST00000546337 SSU72P8A0A1W2PR75 194 aa16.29■□□□□ 0.2
SCRIB-208ENST00000546337 TCRBV5S1A1TA0A578 114 aa16.29■□□□□ 0.2
SCRIB-208ENST00000546337 TBC1D3BA6NDS4 549 aa16.29■□□□□ 0.2
SCRIB-208ENST00000546337 C2CD4BA6NLJ0 364 aa16.29■□□□□ 0.2
SCRIB-208ENST00000546337 GOLGA8SH3BPF8 625 aa16.29■□□□□ 0.2
SCRIB-208ENST00000546337 K7EQS6 105 aa16.29■□□□□ 0.2
SCRIB-208ENST00000546337 DDX3XO00571 662 aaKnown RBP eCLIP16.29■□□□□ 0.2
SCRIB-208ENST00000546337 EGFP01133 1207 aa16.29■□□□□ 0.2
SCRIB-208ENST00000546337 PDGFRAP16234 1089 aa16.29■□□□□ 0.2
SCRIB-208ENST00000546337 SDC4P31431 198 aa16.29■□□□□ 0.2
SCRIB-208ENST00000546337 FLT3P36888 993 aa16.29■□□□□ 0.2
SCRIB-208ENST00000546337 SLC6A11P48066 632 aa16.29■□□□□ 0.2
SCRIB-208ENST00000546337 DGKGP49619 791 aa16.29■□□□□ 0.2
SCRIB-208ENST00000546337 OXCT1P55809 520 aa16.29■□□□□ 0.2
SCRIB-208ENST00000546337 DEUP1Q05D60 604 aa16.29■□□□□ 0.2
SCRIB-208ENST00000546337 MTAPQ13126 283 aa16.29■□□□□ 0.2
SCRIB-208ENST00000546337 EIF4HQ15056 248 aaKnown RBP16.29■□□□□ 0.2
SCRIB-208ENST00000546337 TDRD12Q587J7 1177 aaKnown RBP16.29■□□□□ 0.2
SCRIB-208ENST00000546337 FAM133BQ5BKY9 247 aaKnown RBP16.29■□□□□ 0.2
SCRIB-208ENST00000546337 TTC39BQ5VTQ0 682 aaPredicted RBP16.29■□□□□ 0.2
SCRIB-208ENST00000546337 E4F1Q66K89 784 aaPredicted RBP16.29■□□□□ 0.2
SCRIB-208ENST00000546337 TRMT11Q7Z4G4 463 aaKnown RBP16.29■□□□□ 0.2
SCRIB-208ENST00000546337 CNGA4Q8IV77 575 aa16.29■□□□□ 0.2
SCRIB-208ENST00000546337 CCDC117Q8IWD4 279 aaPredicted RBP16.29■□□□□ 0.2
SCRIB-208ENST00000546337 TERB1Q8NA31 727 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms