RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 HTR6P50406 440 aa5.46□□□□□ -1.54
SNHG1-224ENST00000545688 ATP1A4Q13733 1029 aa5.46□□□□□ -1.54
SNHG1-224ENST00000545688 ELF2Q15723 593 aa5.46□□□□□ -1.54
SNHG1-224ENST00000545688 CCDC144NLQ6NUI1 221 aa5.46□□□□□ -1.54
SNHG1-224ENST00000545688 GJA10Q969M2 543 aa5.46□□□□□ -1.54
SNHG1-224ENST00000545688 MARK4Q96L34 752 aa5.46□□□□□ -1.54
SNHG1-224ENST00000545688 RXFP3Q9NSD7 469 aa5.46□□□□□ -1.54
SNHG1-224ENST00000545688 TLX3O43711 291 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-224ENST00000545688 NDST3O95803 873 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 PECAM1P16284 738 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-224ENST00000545688 STAT6P42226 847 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 GSTM5P46439 218 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 ZNF84P51523 738 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 NANOS2P60321 138 aaKnown RBP5.45□□□□□ -1.54
SNHG1-224ENST00000545688 ARHGAP15Q53QZ3 475 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 TLDC1Q6P9B6 456 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 PIK3AP1Q6ZUJ8 805 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 ADGRF4Q8IZF3 695 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 PELI3Q8N2H9 469 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 OR52L2PQ8NGH6 319 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 ADAMTS15Q8TE58 950 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 OVCA2Q8WZ82 227 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 WASF1Q92558 559 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 SLC25A28Q96A46 364 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 GRAMD1AQ96CP6 724 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 ZNF845Q96IR2 970 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-224ENST00000545688 SNX27Q96L92 541 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 NLRP4Q96MN2 994 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 CAMK1GQ96NX5 476 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 TBCBQ99426 244 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 COLEC11Q9BWP8 271 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 TTLL2Q9BWV7 592 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 CDCP1Q9H5V8 836 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 MSRB1Q9NZV6 116 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 COG5Q9UP83 839 aa5.45□□□□□ -1.54
SNHG1-224ENST00000545688 MYO15BQ96JP2 1530 aa5.44□□□□□ -1.54
SNHG1-224ENST00000545688 TRBV5-3A0A0A0MS03 114 aa5.44□□□□□ -1.54
SNHG1-224ENST00000545688 A0A1W2PPC1 479 aa5.44□□□□□ -1.54
SNHG1-224ENST00000545688 OR2W5A6NFC9 320 aa5.44□□□□□ -1.54
SNHG1-224ENST00000545688 M0QZQ0 153 aa5.44□□□□□ -1.54
SNHG1-224ENST00000545688 UGDHO60701 494 aa5.44□□□□□ -1.54
SNHG1-224ENST00000545688 EGR1P18146 543 aa5.44□□□□□ -1.54
SNHG1-224ENST00000545688 IL6STP40189 918 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-224ENST00000545688 AGTR2P50052 363 aa5.44□□□□□ -1.54
SNHG1-224ENST00000545688 DMWDQ09019 674 aa5.44□□□□□ -1.54
SNHG1-224ENST00000545688 SLC5A9Q2M3M2 681 aa5.44□□□□□ -1.54
SNHG1-224ENST00000545688 KLHL22Q53GT1 634 aa5.44□□□□□ -1.54
SNHG1-224ENST00000545688 COBLL1Q53SF7 1204 aa5.44□□□□□ -1.54
SNHG1-224ENST00000545688 MANEAQ5SRI9 462 aa5.44□□□□□ -1.54
SNHG1-224ENST00000545688 ACSM6Q6P461 480 aa5.44□□□□□ -1.54
SNHG1-224ENST00000545688 ZNF549Q6P9A3 640 aa5.44□□□□□ -1.54
SNHG1-224ENST00000545688 TUBB6Q9BUF5 446 aa5.44□□□□□ -1.54
SNHG1-224ENST00000545688 PAPOLBQ9NRJ5 636 aaKnown RBP5.44□□□□□ -1.54
SNHG1-224ENST00000545688 MAN2B2Q9Y2E5 1009 aa5.44□□□□□ -1.54
SNHG1-224ENST00000545688 CECR2Q9BXF3 1484 aa5.44□□□□□ -1.54
SNHG1-224ENST00000545688 NDUFB8O95169 186 aa5.43□□□□□ -1.54
SNHG1-224ENST00000545688 EPN2O95208 641 aa5.43□□□□□ -1.54
SNHG1-224ENST00000545688 IDEP14735 1019 aa5.43□□□□□ -1.54
SNHG1-224ENST00000545688 SLC8A1P32418 973 aa5.43□□□□□ -1.54
SNHG1-224ENST00000545688 PMS2P11Q13670 270 aa5.43□□□□□ -1.54
SNHG1-224ENST00000545688 P3H1Q32P28 736 aa5.43□□□□□ -1.54
SNHG1-224ENST00000545688 MIDNQ504T8 468 aa5.43□□□□□ -1.54
SNHG1-224ENST00000545688 DAB2IPQ5VWQ8 1189 aa5.43□□□□□ -1.54
SNHG1-224ENST00000545688 DHRS13Q6UX07 377 aa5.43□□□□□ -1.54
SNHG1-224ENST00000545688 MEPCEQ7L2J0 689 aaKnown RBP5.43□□□□□ -1.54
SNHG1-224ENST00000545688 RHPN2Q8IUC4 686 aa5.43□□□□□ -1.54
SNHG1-224ENST00000545688 SLC44A5Q8NCS7 719 aa5.43□□□□□ -1.54
SNHG1-224ENST00000545688 GLMPQ8WWB7 406 aa5.43□□□□□ -1.54
SNHG1-224ENST00000545688 ASB12Q8WXK4 309 aa5.43□□□□□ -1.54
SNHG1-224ENST00000545688 EIF3CQ99613 913 aaKnown RBP5.43□□□□□ -1.54
SNHG1-224ENST00000545688 GDF15Q99988 308 aa5.43□□□□□ -1.54
SNHG1-224ENST00000545688 ELOVL1Q9BW60 279 aa5.43□□□□□ -1.54
SNHG1-224ENST00000545688 METTL14Q9HCE5 456 aaKnown RBP5.43□□□□□ -1.54
SNHG1-224ENST00000545688 PCDHA12Q9UN75 941 aa5.43□□□□□ -1.54
SNHG1-224ENST00000545688 TRIP12Q14669 1992 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-224ENST00000545688 EVPLQ92817 2033 aa5.43□□□□□ -1.54
SNHG1-224ENST00000545688 SPATA31A5Q5VU36 1347 aa5.43□□□□□ -1.54
SNHG1-224ENST00000545688 SPATA31A7Q8IWB4 1347 aa5.43□□□□□ -1.54
SNHG1-224ENST00000545688 A0A0G2JK05 382 aa5.42□□□□□ -1.54
SNHG1-224ENST00000545688 FAM90A8PA6NJQ4 464 aa5.42□□□□□ -1.54
SNHG1-224ENST00000545688 CTIFO43310 598 aaKnown RBP5.42□□□□□ -1.54
SNHG1-224ENST00000545688 VIPP01282 170 aa5.42□□□□□ -1.54
SNHG1-224ENST00000545688 FAM90A13PP0C7W8 464 aa5.42□□□□□ -1.54
SNHG1-224ENST00000545688 FAM90A24PP0C7X0 464 aa5.42□□□□□ -1.54
SNHG1-224ENST00000545688 HARSP12081 509 aaKnown RBP5.42□□□□□ -1.54
SNHG1-224ENST00000545688 AKR1A1P14550 325 aa5.42□□□□□ -1.54
SNHG1-224ENST00000545688 IFIT5Q13325 482 aaKnown RBP5.42□□□□□ -1.54
SNHG1-224ENST00000545688 PRTGQ2VWP7 1150 aa5.42□□□□□ -1.54
SNHG1-224ENST00000545688 C16orf89Q6UX73 402 aa5.42□□□□□ -1.54
SNHG1-224ENST00000545688 RFX8Q6ZV50 586 aa5.42□□□□□ -1.54
SNHG1-224ENST00000545688 LAS2Q8IYD9 372 aa5.42□□□□□ -1.54
SNHG1-224ENST00000545688 TXLNBQ8N3L3 684 aa5.42□□□□□ -1.54
SNHG1-224ENST00000545688 ARL14EPQ8N8R7 260 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-224ENST00000545688 GLIS1Q8NBF1 620 aa5.42□□□□□ -1.54
SNHG1-224ENST00000545688 KAT2BQ92831 832 aa5.42□□□□□ -1.54
SNHG1-224ENST00000545688 MSI2Q96DH6 328 aaKnown RBP5.42□□□□□ -1.54
SNHG1-224ENST00000545688 LYZL4Q96KX0 146 aa5.42□□□□□ -1.54
SNHG1-224ENST00000545688 PIMREGQ9BSJ6 248 aa5.42□□□□□ -1.54
SNHG1-224ENST00000545688 SARGQ9BW04 601 aa5.42□□□□□ -1.54
SNHG1-224ENST00000545688 TRIM2Q9C040 744 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms