RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 ITGA9Q13797 1035 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 CCDC14Q49A88 953 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 SFT2D3Q587I9 215 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 FSCBQ5H9T9 825 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 N4BP2L1Q5TBK1 243 aaPredicted RBP9.02□□□□□ -0.97
TDP1-204ENST00000545686 SH3PXD2AQ5TCZ1 1133 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 PDPK2PQ6A1A2 396 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 OR6B2Q6IFH4 312 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 DPY19L2Q6NUT2 758 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 TMEM126BQ8IUX1 230 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 HACE1Q8IYU2 909 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 RNF149Q8NC42 400 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 SLC26A7Q8TE54 656 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 GDPD5Q8WTR4 605 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 PYDC1Q8WXC3 89 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 SORT1Q99523 831 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 NAT9Q9BTE0 207 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 SNRNP25Q9BV90 132 aaKnown RBP9.02□□□□□ -0.97
TDP1-204ENST00000545686 FZD8Q9H461 694 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 EIF2B3Q9NR50 452 aaKnown RBP9.02□□□□□ -0.97
TDP1-204ENST00000545686 ZNF277Q9NRM2 450 aaPredicted RBP9.02□□□□□ -0.97
TDP1-204ENST00000545686 GTF2IRD1Q9UHL9 959 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 BARX2Q9UMQ3 279 aaPredicted RBP9.02□□□□□ -0.97
TDP1-204ENST00000545686 C19orf81C9J6K1 198 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 ITM2AO43736 263 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 ATP9BO43861 1147 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 METTL18O95568 372 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 STAU1O95793 577 aaKnown RBP9.02□□□□□ -0.97
TDP1-204ENST00000545686 PROCP04070 461 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 ALDOAP04075 364 aaKnown RBP9.02□□□□□ -0.97
TDP1-204ENST00000545686 SRGAP2CP0DJJ0 459 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 SETSIPP0DME0 302 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 CXCL8P10145 99 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 VCLP18206 1134 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 SDC4P31431 198 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 RPL10AP62906 217 aaKnown RBP9.02□□□□□ -0.97
TDP1-204ENST00000545686 PDE1CQ14123 709 aaPredicted RBP9.02□□□□□ -0.97
TDP1-204ENST00000545686 DPYSL2Q16555 572 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 DCAF15Q66K64 600 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 PACS1Q6VY07 963 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 RNF111Q6ZNA4 994 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 MPP5Q8N3R9 675 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 FBXW8Q8N3Y1 598 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 DRAXINQ8NBI3 349 aaPredicted RBP9.02□□□□□ -0.97
TDP1-204ENST00000545686 CHST13Q8NET6 341 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 CXorf38Q8TB03 319 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 NAT14Q8WUY8 206 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 CDT1Q9H211 546 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 C6orf203Q9P0P8 240 aaPredicted RBP9.02□□□□□ -0.97
TDP1-204ENST00000545686 ADAMTS6Q9UKP5 1117 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 POMPQ9Y244 141 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 TNFSF13BQ9Y275 285 aa9.02□□□□□ -0.97
TDP1-204ENST00000545686 HACD1B0YJ81 288 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 ZNF195O14628 629 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 TPP1O14773 563 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 OPHN1O60890 802 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 LYPLA1O75608 230 aaPredicted RBP9.01□□□□□ -0.97
TDP1-204ENST00000545686 PENKP01210 267 aaPredicted RBP9.01□□□□□ -0.97
TDP1-204ENST00000545686 NFICP08651 508 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 PGAM1P18669 254 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 MX2P20592 715 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 ITGAXP20702 1163 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 CYP2F1P24903 491 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 PEX2P28328 305 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 CHN2P52757 468 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 AQP4P55087 323 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 MTTPP55157 894 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 SNX16P57768 344 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 ABCE1P61221 599 aaKnown RBP9.01□□□□□ -0.97
TDP1-204ENST00000545686 ORC1Q13415 861 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 CDO1Q16878 200 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 RALGPS1Q5JS13 557 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 OGFRL1Q5TC84 451 aaPredicted RBP9.01□□□□□ -0.97
TDP1-204ENST00000545686 OLFML1Q6UWY5 402 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 DENND5BQ6ZUT9 1274 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 MAVSQ7Z434 540 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 KBTBD6Q86V97 674 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 ZDHHC17Q8IUH5 632 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 TTLL6Q8N841 843 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 SEPT1Q8WYJ6 367 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 OPTNQ96CV9 577 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 HEXIM2Q96MH2 286 aaKnown RBP9.01□□□□□ -0.97
TDP1-204ENST00000545686 NDNQ99608 321 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 RTKNQ9BST9 563 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 PRDM16Q9HAZ2 1276 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 NGRNQ9NPE2 291 aaKnown RBP9.01□□□□□ -0.97
TDP1-204ENST00000545686 XPNPEP3Q9NQH7 507 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 ZNF112Q9UJU3 913 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 PRPF19Q9UMS4 504 aaKnown RBP9.01□□□□□ -0.97
TDP1-204ENST00000545686 ARHGAP26Q9UNA1 814 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 CDY2AQ9Y6F7 541 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 CDY1Q9Y6F8 540 aa9.01□□□□□ -0.97
TDP1-204ENST00000545686 PDCD11Q14690 1871 aaKnown RBP9.01□□□□□ -0.97
TDP1-204ENST00000545686 ITGB3P05106 788 aa9□□□□□ -0.97
TDP1-204ENST00000545686 TGFB3P10600 412 aa9□□□□□ -0.97
TDP1-204ENST00000545686 EDNRBP24530 442 aa9□□□□□ -0.97
TDP1-204ENST00000545686 TCF7P36402 384 aaPredicted RBP9□□□□□ -0.97
TDP1-204ENST00000545686 GARSP41250 739 aaKnown RBP9□□□□□ -0.97
TDP1-204ENST00000545686 EPHB1P54762 984 aa9□□□□□ -0.97
TDP1-204ENST00000545686 TNFAIP2Q03169 654 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms