RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 ZNF263O14978 683 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 DAB1O75553 588 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 OLFM2O95897 454 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 CYP1A2P05177 515 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 NCAM1P13591 858 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 HDCP19113 662 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 ABCB4P21439 1286 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 NOS2P35228 1153 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 MATKP42679 507 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 CXCL12P48061 93 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 KPNA1P52294 538 aaPredicted RBP12.35□□□□□ -0.43
LTBR-214ENST00000545445 CCZ1BP86790 482 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 CCZ1P86791 482 aaPredicted RBP12.35□□□□□ -0.43
LTBR-214ENST00000545445 MAMLD1Q13495 774 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 SF3A2Q15428 464 aaKnown RBP12.35□□□□□ -0.43
LTBR-214ENST00000545445 TEAD2Q15562 447 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 CCDC6Q16204 474 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 AASDHQ4L235 1098 aaPredicted RBP12.35□□□□□ -0.43
LTBR-214ENST00000545445 C2CD6Q53TS8 623 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 FAM78AQ5JUQ0 283 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 GPR158Q5T848 1215 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 TXNDC8Q6A555 127 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 MSANTD2Q6P1R3 559 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 DCUN1D2Q6PH85 259 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 MAMSTRQ6ZN01 415 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 RHOT2Q8IXI1 618 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 FAM160A2Q8N612 972 aaPredicted RBP12.35□□□□□ -0.43
LTBR-214ENST00000545445 NDRG1Q92597 394 aaKnown RBP12.35□□□□□ -0.43
LTBR-214ENST00000545445 CALR3Q96L12 384 aaKnown RBP12.35□□□□□ -0.43
LTBR-214ENST00000545445 NACA2Q9H009 215 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 THAP2Q9H0W7 228 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 SLITRK6Q9H5Y7 841 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 OSER1Q9NX31 292 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.35□□□□□ -0.43
LTBR-214ENST00000545445 DNMT3LQ9UJW3 386 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 STAP1Q9ULZ2 295 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 ASPMQ8IZT6 3477 aa12.35□□□□□ -0.43
LTBR-214ENST00000545445 PROS1P07225 676 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 GDI1P31150 447 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 HOXC13P31276 330 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 GBP1P32455 592 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 AVPR1AP37288 418 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 SLC7A9P82251 487 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 COG7P83436 770 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 CYP4F8P98187 520 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 NNTQ13423 1086 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 MTF1Q14872 753 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 TCEAL1Q15170 157 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 DCAF6Q58WW2 860 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 C10orf120Q5SQS8 335 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 PPP1R15BQ5SWA1 713 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 DDX42Q86XP3 938 aaKnown RBP eCLIP12.34□□□□□ -0.43
LTBR-214ENST00000545445 CMTM8Q8IZV2 173 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 MAB21L3Q8N8X9 362 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 FNIP1Q8TF40 1166 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 E2F7Q96AV8 911 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 PIWIL1Q96J94 861 aaKnown RBP12.34□□□□□ -0.43
LTBR-214ENST00000545445 NCAPGQ9BPX3 1015 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 TRMT61BQ9BVS5 477 aaKnown RBP12.34□□□□□ -0.43
LTBR-214ENST00000545445 SLC46A2Q9BY10 475 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 TRPC7Q9HCX4 862 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 METTL5Q9NRN9 209 aaKnown RBP12.34□□□□□ -0.43
LTBR-214ENST00000545445 RXFP3Q9NSD7 469 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 RBM12Q9NTZ6 932 aaKnown RBP12.34□□□□□ -0.43
LTBR-214ENST00000545445 MYO1AQ9UBC5 1043 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 COL4A2P08572 1712 aa12.34□□□□□ -0.43
LTBR-214ENST00000545445 CNOT1A5YKK6 2376 aaKnown RBP12.33□□□□□ -0.44
LTBR-214ENST00000545445 ZNF638Q14966 1978 aaKnown RBP12.33□□□□□ -0.44
LTBR-214ENST00000545445 A0A0A6YYK5 440 aaPredicted RBP12.33□□□□□ -0.44
LTBR-214ENST00000545445 C2orf78A6NCI8 922 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 TMEM191CA6NGB0 347 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 C2CD4BA6NLJ0 364 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 BTNL10A8MVZ5 291 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 C1QTNF9BB2RNN3 333 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 K7ESF4 209 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 COCHO43405 550 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 GRAP2O75791 330 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 F9P00740 461 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 FYNP06241 537 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 CKMP06732 381 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 C1QTNF9P0C862 333 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 CHRNB1P11230 501 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 PDGFRAP16234 1089 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 GJA1P17302 382 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 SDC4P31431 198 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 PGFP49763 221 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 VAV2P52735 878 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 RNASE9P60153 205 aaKnown RBP12.33□□□□□ -0.44
LTBR-214ENST00000545445 MTA1Q13330 715 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 ACAP1Q15027 740 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 TAF5Q15542 800 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 SLC25A52Q3SY17 297 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 VITQ6UXI7 678 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 Q6ZS52 159 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 CEP68Q76N32 757 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 KIAA1328Q86T90 577 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 LONP2Q86WA8 852 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 DEFB106AQ8N104 65 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 KIAA1958Q8N8K9 716 aa12.33□□□□□ -0.44
LTBR-214ENST00000545445 C12orf50Q8NA57 414 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms