RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 VPS11Q9H270 941 aa6.73□□□□□ -1.33
CPSF7-222ENST00000544585 SFXN1Q9H9B4 322 aa6.73□□□□□ -1.33
CPSF7-222ENST00000544585 PRDM7Q9NQW5 492 aa6.73□□□□□ -1.33
CPSF7-222ENST00000544585 NRBP2Q9NSY0 501 aa6.73□□□□□ -1.33
CPSF7-222ENST00000544585 RBM12Q9NTZ6 932 aaKnown RBP6.73□□□□□ -1.33
CPSF7-222ENST00000544585 KCMF1Q9P0J7 381 aa6.73□□□□□ -1.33
CPSF7-222ENST00000544585 CDH22Q9UJ99 828 aa6.73□□□□□ -1.33
CPSF7-222ENST00000544585 GTF2A1LQ9UNN4 478 aa6.73□□□□□ -1.33
CPSF7-222ENST00000544585 CORO2BQ9UQ03 480 aa6.73□□□□□ -1.33
CPSF7-222ENST00000544585 SSX2IPQ9Y2D8 614 aa6.73□□□□□ -1.33
CPSF7-222ENST00000544585 PCDHA13Q9Y5I0 950 aa6.73□□□□□ -1.33
CPSF7-222ENST00000544585 TPRP12270 2363 aaKnown RBP6.73□□□□□ -1.33
CPSF7-222ENST00000544585 SETXQ7Z333 2677 aaKnown RBP6.73□□□□□ -1.33
CPSF7-222ENST00000544585 ATG2AQ2TAZ0 1938 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 A0A088AWK7 358 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 hCG_1642624A0A1W2PR95 340 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 ZNF839A8K0R7 811 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 FAM171A2A8MVW0 826 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 NT5C1B-RDH14C9J2C7 533 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 KPNA5O15131 536 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 KINO60870 393 aaKnown RBP6.72□□□□□ -1.33
CPSF7-222ENST00000544585 MPOP05164 745 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 GALTP07902 379 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 SP9P0CG40 484 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 ARP10275 920 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 EPCAMP16422 314 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 TNFSF4P23510 183 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 KLRC2P26717 231 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 METAP2P50579 478 aaKnown RBP eCLIP6.72□□□□□ -1.33
CPSF7-222ENST00000544585 NLRP11P59045 1033 aaKnown RBP6.72□□□□□ -1.33
CPSF7-222ENST00000544585 RAB1AP62820 205 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 PFKPQ01813 784 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 DOC2BQ14184 412 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 RSPO4Q2I0M5 234 aaPredicted RBP6.72□□□□□ -1.33
CPSF7-222ENST00000544585 ZNF528Q3MIS6 628 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 ALFQ53S48 1182 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 VASNQ6EMK4 673 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 TEPPQ6URK8 271 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 NIPA1Q7RTP0 329 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 SLC44A3Q8N4M1 653 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 CMASQ8NFW8 434 aaPredicted RBP6.72□□□□□ -1.33
CPSF7-222ENST00000544585 SECISBP2LQ93073 1101 aaKnown RBP6.72□□□□□ -1.33
CPSF7-222ENST00000544585 TRIM63Q969Q1 353 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 TSPAN17Q96FV3 270 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 APIPQ96GX9 242 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 IGSF21Q96ID5 467 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 KLHL5Q96PQ7 755 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 MAP7D2Q96T17 732 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 INO80BQ9C086 356 aaPredicted RBP6.72□□□□□ -1.33
CPSF7-222ENST00000544585 WDR12Q9GZL7 423 aaKnown RBP6.72□□□□□ -1.33
CPSF7-222ENST00000544585 ZBP1Q9H171 429 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 GLT8D2Q9H1C3 349 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 RWDD1Q9H446 243 aaPredicted RBP6.72□□□□□ -1.33
CPSF7-222ENST00000544585 AGO4Q9HCK5 861 aaKnown RBP6.72□□□□□ -1.33
CPSF7-222ENST00000544585 TBC1D22BQ9NU19 505 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 HSPBP1Q9NZL4 362 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 SCOCQ9UIL1 159 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 R4GN57 208 aa6.72□□□□□ -1.33
CPSF7-222ENST00000544585 NUDT19A8MXV4 375 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 E7EWF7 191 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 CUTAO60888 179 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 C22orf31O95567 290 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 C1RP00736 705 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 VTNP04004 478 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 CYP21A2P08686 494 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 TRHRP34981 398 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-222ENST00000544585 GDNFP39905 211 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 PBX3P40426 434 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 GALK1P51570 392 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 ATXN1P54253 815 aaKnown RBP6.71□□□□□ -1.34
CPSF7-222ENST00000544585 PRR5P85299 388 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 DSC2Q02487 901 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 MGAT2Q10469 447 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 FGL2Q14314 439 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 PTPN14Q15678 1187 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 CLLU1OSQ5K130 101 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 DGKKQ5KSL6 1271 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 CCDC70Q6NSX1 233 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 EFCAB12Q6NXP0 572 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 SLC23A3Q6PIS1 610 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 APOA5Q6Q788 366 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 ETV3LQ6ZN32 361 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 ZNF574Q6ZN55 896 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-222ENST00000544585 RHOT1Q8IXI2 618 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 DCLK2Q8N568 766 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 SRBD1Q8N5C6 995 aaKnown RBP6.71□□□□□ -1.34
CPSF7-222ENST00000544585 SUMF1Q8NBK3 374 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 RNF169Q8NCN4 708 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 C3orf20Q8ND61 904 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 HDAC7Q8WUI4 952 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 RUFY2Q8WXA3 655 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 RTKNQ9BST9 563 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 BTBD2Q9BX70 525 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 C22orf23Q9BZE7 217 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 OR10A5Q9H207 317 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 KIAA1586Q9HCI6 787 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 WDR6Q9NNW5 1121 aaKnown RBP6.71□□□□□ -1.34
CPSF7-222ENST00000544585 MRPL17Q9NRX2 175 aaKnown RBP6.71□□□□□ -1.34
CPSF7-222ENST00000544585 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.71□□□□□ -1.348e-9■■■■■ 27.8
CPSF7-222ENST00000544585 GPRC5BQ9NZH0 403 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms