RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 CDRT15Q96T59 188 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 PRKAG3Q9UGI9 489 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 LNPEPQ9UIQ6 1025 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 DRG1Q9Y295 367 aaKnown RBP15.81■□□□□ 0.12
CHD4-210ENST00000544040 IQCMA0A1B0GVH7 501 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 SLC26A4O43511 780 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 PDE9AO76083 593 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 MAPK9P45984 424 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 ZNF605Q86T29 641 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 OSCP1Q8WVF1 389 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 LPAR1Q92633 364 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 NFKBIZQ9BYH8 718 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 MROH7Q68CQ1 1323 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 THPOP40225 353 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 SKIV2L2P42285 1042 aaKnown RBP15.81■□□□□ 0.12
CHD4-210ENST00000544040 TKFCQ3LXA3 575 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 CDC73Q6P1J9 531 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 UMPSP11172 480 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 PPP2R1BP30154 601 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 CCDC3Q9BQI4 270 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 DMGDHQ9UI17 866 aaKnown RBP15.81■□□□□ 0.12
CHD4-210ENST00000544040 VAV3Q9UKW4 847 aa15.81■□□□□ 0.12
CHD4-210ENST00000544040 CCDC153Q494R4 210 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 ZCCHC8Q6NZY4 707 aaKnown RBP15.8■□□□□ 0.12
CHD4-210ENST00000544040 ZNF70Q9UC06 446 aaPredicted RBP15.8■□□□□ 0.12
CHD4-210ENST00000544040 TTC37Q6PGP7 1564 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 SLC12A8A0AV02 714 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 B3GAT3O94766 335 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 RHOCP08134 193 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 VDRP11473 427 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 H2AFXP16104 143 aaPredicted RBP15.8■□□□□ 0.12
CHD4-210ENST00000544040 CYP11B2P19099 503 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 ALDH7A1P49419 539 aaKnown RBP15.8■□□□□ 0.12
CHD4-210ENST00000544040 BTN2A1Q7KYR7 527 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 SNX32Q86XE0 403 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 ZNF671Q8TAW3 534 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 ZFRQ96KR1 1074 aaKnown RBP15.8■□□□□ 0.12
CHD4-210ENST00000544040 NRDE2Q9H7Z3 1164 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 A1CFQ9NQ94 594 aaKnown RBP15.8■□□□□ 0.12
CHD4-210ENST00000544040 NYAP2Q9P242 653 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 CNOT7Q9UIV1 285 aaKnown RBP15.8■□□□□ 0.12
CHD4-210ENST00000544040 UBQLN1Q9UMX0 589 aaKnown RBP15.8■□□□□ 0.12
CHD4-210ENST00000544040 PLAGL2Q9UPG8 496 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 AXIN2Q9Y2T1 843 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 EFCAB6Q5THR3 1501 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 MRASO14807 208 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 NUDT14O95848 222 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 VAV1P15498 845 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 ZNF37AP17032 561 aaPredicted RBP15.8■□□□□ 0.12
CHD4-210ENST00000544040 MGAT1P26572 445 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 NFIXQ14938 502 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 FOXR1Q6PIV2 292 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 BHLHE22Q8NFJ8 381 aaPredicted RBP15.8■□□□□ 0.12
CHD4-210ENST00000544040 MOSPD2Q8NHP6 518 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 RIT2Q99578 217 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 SEMA6BQ9H3T3 888 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 POMKQ9H5K3 350 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 ATAD3AQ9NVI7 634 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 L1RE1Q9UN81 338 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 SIK3Q9Y2K2 1263 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 POLR1DQ9Y2S0 133 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 ELK3P41970 407 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 NPY2RP49146 381 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 IFI35P80217 286 aaPredicted RBP15.8■□□□□ 0.12
CHD4-210ENST00000544040 KIAA0408Q6ZU52 694 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 C3orf67Q6ZVT6 689 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 RSPH9Q9H1X1 276 aaPredicted RBP15.8■□□□□ 0.12
CHD4-210ENST00000544040 SLC24A2Q9UI40 661 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 OR6B1O95007 311 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 VCLP18206 1134 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 TRMT11Q7Z4G4 463 aaKnown RBP15.8■□□□□ 0.12
CHD4-210ENST00000544040 PROSER1Q86XN7 944 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 PARP8Q8N3A8 854 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 RXFP2Q8WXD0 754 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 KLHL28Q9NXS3 571 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 TPRKBQ9Y3C4 175 aa15.8■□□□□ 0.12
CHD4-210ENST00000544040 C17orf102A2RUQ5 167 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 FAM153BP0C7A2 387 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 PLK1P53350 603 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 PTSQ03393 145 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 FAM153CQ494X1 144 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 SBK1Q52WX2 424 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 CBWD3Q5JTY5 395 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 CBWD5Q5RIA9 395 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 PAPD7Q5XG87 772 aaKnown RBP15.79■□□□□ 0.12
CHD4-210ENST00000544040 SIX5Q8N196 739 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 SENP6Q9GZR1 1112 aaPredicted RBP15.79■□□□□ 0.12
CHD4-210ENST00000544040 STN1Q9H668 368 aaKnown RBP15.79■□□□□ 0.12
CHD4-210ENST00000544040 VPS45Q9NRW7 570 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 PABPC1P11940 636 aaKnown RBP15.79■□□□□ 0.12
CHD4-210ENST00000544040 MGAT5Q09328 741 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 ILDR2Q71H61 639 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 ANKEF1Q9NU02 776 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 TOR4AQ9NXH8 423 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 ATXN2Q99700 1313 aaKnown RBP15.79■□□□□ 0.12
CHD4-210ENST00000544040 DCXO43602 365 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 GARTP22102 1010 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 PUDPQ08623 228 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 TFAP2DQ7Z6R9 452 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 FAM9CQ8IZT9 166 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms