RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 DENND5BQ6ZUT9 1274 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 SUGP1Q8IWZ8 645 aaKnown RBP9.66□□□□□ -0.86
GNE-206ENST00000543356 TMEM169Q96HH4 297 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 ZIM3Q96PE6 472 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 SEPT5Q99719 369 aaPredicted RBP9.66□□□□□ -0.86
GNE-206ENST00000543356 SH3GL2Q99962 352 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 MAGEB5Q9BZ81 275 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 ADAM7Q9H2U9 754 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 CRISPLD1Q9H336 500 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 WDCPQ9H6R7 721 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 NMUR1Q9HB89 426 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 ANLNQ9NQW6 1124 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 TMPRSS4Q9NRS4 437 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 SPG21Q9NZD8 308 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 STK39Q9UEW8 545 aa9.66□□□□□ -0.86
GNE-206ENST00000543356 H7C0C1 242 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 I6L893 689 aaPredicted RBP9.65□□□□□ -0.86
GNE-206ENST00000543356 EEF2KO00418 725 aaKnown RBP9.65□□□□□ -0.86
GNE-206ENST00000543356 ZSCAN5DPP0CG00 497 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 ETS1P14921 441 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 YWHAQP27348 245 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 OAS2P29728 719 aaKnown RBP9.65□□□□□ -0.86
GNE-206ENST00000543356 GGCXP38435 758 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 MAGEA9P43362 315 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 ATP5OP48047 213 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 GLUD2P49448 558 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 PMS2P54278 862 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 USP46P62068 366 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 GPS1Q13098 491 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 PPP2R5DQ14738 602 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 MORF4L2Q15014 288 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 PAFAH1B3Q15102 231 aaKnown RBP9.65□□□□□ -0.86
GNE-206ENST00000543356 C11orf91Q3C1V1 193 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 MGAT5BQ3V5L5 792 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 HSP90B2PQ58FF3 399 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 KIAA1841Q6NSI8 718 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 RFX8Q6ZV50 586 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 BZW1Q7L1Q6 419 aaKnown RBP9.65□□□□□ -0.86
GNE-206ENST00000543356 TMCO2Q7Z6W1 182 aaPredicted RBP9.65□□□□□ -0.86
GNE-206ENST00000543356 PCGF5Q86SE9 256 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 DDX53Q86TM3 631 aaKnown RBP9.65□□□□□ -0.86
GNE-206ENST00000543356 PRUNE1Q86TP1 453 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 UNC45BQ8IWX7 931 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 GPR65Q8IYL9 337 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 SERPINB11Q96P15 392 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 OLFM3Q96PB7 478 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 QKIQ96PU8 341 aaKnown RBP eCLIP9.65□□□□□ -0.86
GNE-206ENST00000543356 RUFY1Q96T51 708 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 TKTL2Q9H0I9 626 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 OSBPL2Q9H1P3 480 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 CLIC5Q9NZA1 410 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 GMIPQ9P107 970 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 TPX2Q9ULW0 747 aaKnown RBP9.65□□□□□ -0.86
GNE-206ENST00000543356 SHOC2Q9UQ13 582 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 SLC27A5Q9Y2P5 690 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 ATP8A1Q9Y2Q0 1164 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 HEY1Q9Y5J3 304 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 RAD54BQ9Y620 910 aa9.65□□□□□ -0.86
GNE-206ENST00000543356 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.65□□□□□ -0.87
GNE-206ENST00000543356 HACD1B0YJ81 288 aa9.65□□□□□ -0.87
GNE-206ENST00000543356 ADAM12O43184 909 aa9.65□□□□□ -0.87
GNE-206ENST00000543356 OPA1O60313 960 aa9.65□□□□□ -0.87
GNE-206ENST00000543356 ZNF189O75820 626 aaPredicted RBP9.65□□□□□ -0.87
GNE-206ENST00000543356 SYF2O95926 243 aaKnown RBP9.65□□□□□ -0.87
GNE-206ENST00000543356 RARGP13631 454 aa9.65□□□□□ -0.87
GNE-206ENST00000543356 AMPD1P23109 780 aa9.65□□□□□ -0.87
GNE-206ENST00000543356 HTR7P34969 479 aa9.65□□□□□ -0.87
GNE-206ENST00000543356 PPM1AP35813 382 aa9.65□□□□□ -0.87
GNE-206ENST00000543356 TUFMP49411 452 aaKnown RBP9.65□□□□□ -0.87
GNE-206ENST00000543356 PGFP49763 221 aa9.65□□□□□ -0.87
GNE-206ENST00000543356 GBE1Q04446 702 aa9.65□□□□□ -0.87
GNE-206ENST00000543356 SLC45A4Q5BKX6 768 aa9.65□□□□□ -0.87
GNE-206ENST00000543356 RNASEH2BQ5TBB1 312 aaKnown RBP9.65□□□□□ -0.87
GNE-206ENST00000543356 TPGS2Q68CL5 300 aa9.65□□□□□ -0.87
GNE-206ENST00000543356 FAM117BQ6P1L5 589 aa9.65□□□□□ -0.87
GNE-206ENST00000543356 ZC3H18Q86VM9 953 aaKnown RBP9.65□□□□□ -0.87
GNE-206ENST00000543356 ZCCHC9Q8N567 271 aaKnown RBP9.65□□□□□ -0.87
GNE-206ENST00000543356 CASP10Q92851 521 aa9.65□□□□□ -0.87
GNE-206ENST00000543356 FBXO32Q969P5 355 aa9.65□□□□□ -0.87
GNE-206ENST00000543356 HAPLN3Q96S86 360 aa9.65□□□□□ -0.87
GNE-206ENST00000543356 YME1L1Q96TA2 773 aa9.65□□□□□ -0.87
GNE-206ENST00000543356 TTLL2Q9BWV7 592 aa9.65□□□□□ -0.87
GNE-206ENST00000543356 PABPC3Q9H361 631 aaKnown RBP9.65□□□□□ -0.87
GNE-206ENST00000543356 AAASQ9NRG9 546 aa9.65□□□□□ -0.87
GNE-206ENST00000543356 OSER1Q9NX31 292 aa9.65□□□□□ -0.87
GNE-206ENST00000543356 AFF4Q9UHB7 1163 aaKnown RBP9.65□□□□□ -0.87
GNE-206ENST00000543356 PLAAQ9Y263 795 aa9.65□□□□□ -0.87
GNE-206ENST00000543356 FARP1Q9Y4F1 1045 aaPredicted RBP9.65□□□□□ -0.87
GNE-206ENST00000543356 SMAPO00193 183 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 DCLK1O15075 740 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 SOAT2O75908 522 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 ABLIM3O94929 683 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 IFNB1P01574 187 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 ATF6P18850 670 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 OR1D2P34982 312 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 RPL22P35268 128 aaKnown RBP9.64□□□□□ -0.87
GNE-206ENST00000543356 TPI1P60174 286 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 HTRA4P83105 476 aaPredicted RBP9.64□□□□□ -0.87
GNE-206ENST00000543356 FPGSQ05932 587 aa9.64□□□□□ -0.87
GNE-206ENST00000543356 DUSP4Q13115 394 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms