RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 GOLPH3LQ9H4A5 285 aa18.21■□□□□ 0.51
PPP1CA-210ENST00000542876 TSPAN16Q9UKR8 245 aa18.21■□□□□ 0.51
PPP1CA-210ENST00000542876 ASPMQ8IZT6 3477 aa18.2■□□□□ 0.5
PPP1CA-210ENST00000542876 SLC16A3O15427 465 aaKnown RBP18.2■□□□□ 0.5
PPP1CA-210ENST00000542876 SH3BP5O60239 455 aa18.2■□□□□ 0.5
PPP1CA-210ENST00000542876 PDE4CQ08493 712 aa18.2■□□□□ 0.5
PPP1CA-210ENST00000542876 BST2Q10589 180 aaKnown RBP18.2■□□□□ 0.5
PPP1CA-210ENST00000542876 GRIK2Q13002 908 aa18.2■□□□□ 0.5
PPP1CA-210ENST00000542876 CUL2Q13617 745 aa18.2■□□□□ 0.5
PPP1CA-210ENST00000542876 TRIP4Q15650 581 aaPredicted RBP18.2■□□□□ 0.5
PPP1CA-210ENST00000542876 TRIP6Q15654 476 aaKnown RBP18.2■□□□□ 0.5
PPP1CA-210ENST00000542876 DNASE2BQ8WZ79 361 aa18.2■□□□□ 0.5
PPP1CA-210ENST00000542876 KLK13Q9UKR3 277 aa18.2■□□□□ 0.5
PPP1CA-210ENST00000542876 PLA2G4CQ9UP65 541 aa18.2■□□□□ 0.5
PPP1CA-210ENST00000542876 ZDHHC9Q9Y397 364 aa18.2■□□□□ 0.5
PPP1CA-210ENST00000542876 HBS1LQ9Y450 684 aaKnown RBP18.2■□□□□ 0.5
PPP1CA-210ENST00000542876 FAM193AP78312 1265 aa18.19■□□□□ 0.5
PPP1CA-210ENST00000542876 FKBP3Q00688 224 aaKnown RBP18.19■□□□□ 0.5
PPP1CA-210ENST00000542876 ADIGQ0VDE8 80 aa18.19■□□□□ 0.5
PPP1CA-210ENST00000542876 CBWD6Q4V339 395 aa18.19■□□□□ 0.5
PPP1CA-210ENST00000542876 CBWD3Q5JTY5 395 aa18.19■□□□□ 0.5
PPP1CA-210ENST00000542876 CBWD5Q5RIA9 395 aa18.19■□□□□ 0.5
PPP1CA-210ENST00000542876 DCAF12L1Q5VU92 463 aa18.19■□□□□ 0.5
PPP1CA-210ENST00000542876 CACUL1Q86Y37 369 aa18.19■□□□□ 0.5
PPP1CA-210ENST00000542876 NAXDQ8IW45 347 aa18.19■□□□□ 0.5
PPP1CA-210ENST00000542876 FAM217AQ8IXS0 508 aa18.19■□□□□ 0.5
PPP1CA-210ENST00000542876 CHCHD4Q8N4Q1 142 aa18.19■□□□□ 0.5
PPP1CA-210ENST00000542876 ZCCHC9Q8N567 271 aaKnown RBP18.19■□□□□ 0.5
PPP1CA-210ENST00000542876 ABCC13Q9NSE7 274 aa18.19■□□□□ 0.5
PPP1CA-210ENST00000542876 CLEC4EQ9ULY5 219 aa18.19■□□□□ 0.5
PPP1CA-210ENST00000542876 PCNX2A6NKB5 2137 aa18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 KCNJ18B7U540 433 aa18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 TULP2O00295 520 aa18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 TSPAN3O60637 253 aa18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 GJB3O75712 270 aa18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 SETSIPP0DME0 302 aa18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 VDRP11473 427 aa18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 TBXAS1P24557 533 aaPredicted RBP18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 PRKCHP24723 683 aa18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 PNOCQ13519 176 aa18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 FNDC3BQ53EP0 1204 aaKnown RBP18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 BSPRYQ5W0U4 402 aa18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 IL27RAQ6UWB1 636 aa18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 WFIKKN2Q8TEU8 576 aa18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 SORCS1Q8WY21 1168 aa18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 NDRG1Q92597 394 aaKnown RBP18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 EDEM1Q92611 657 aa18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 TMA16Q96EY4 203 aaKnown RBP18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 CAMK1GQ96NX5 476 aa18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 ARMCX3Q9UH62 379 aaPredicted RBP18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 KIAA1257Q9ULG3 409 aa18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 COQ4Q9Y3A0 265 aa18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 FAM208BQ5VWN6 2430 aa18.18■□□□□ 0.5
PPP1CA-210ENST00000542876 GOLGA6L4A6NEF3 574 aa18.17■□□□□ 0.5
PPP1CA-210ENST00000542876 METTL12A8MUP2 240 aa18.17■□□□□ 0.5
PPP1CA-210ENST00000542876 BCAT2O15382 392 aaPredicted RBP18.17■□□□□ 0.5
PPP1CA-210ENST00000542876 SMC2O95347 1197 aa18.17■□□□□ 0.5
PPP1CA-210ENST00000542876 CER1O95813 267 aa18.17■□□□□ 0.5
PPP1CA-210ENST00000542876 LATS1O95835 1130 aa18.17■□□□□ 0.5
PPP1CA-210ENST00000542876 IGLV3-19P01714 112 aa18.17■□□□□ 0.5
PPP1CA-210ENST00000542876 HOXD9P28356 352 aaPredicted RBP18.17■□□□□ 0.5
PPP1CA-210ENST00000542876 PRCPP42785 496 aa18.17■□□□□ 0.5
PPP1CA-210ENST00000542876 COPAP53621 1224 aa18.17■□□□□ 0.5
PPP1CA-210ENST00000542876 ADGRF1Q5T601 910 aa18.17■□□□□ 0.5
PPP1CA-210ENST00000542876 ZNF658Q5TYW1 1059 aaPredicted RBP18.17■□□□□ 0.5
PPP1CA-210ENST00000542876 FAM124AQ86V42 546 aa18.17■□□□□ 0.5
PPP1CA-210ENST00000542876 OR2T3Q8NH03 318 aa18.17■□□□□ 0.5
PPP1CA-210ENST00000542876 UBA3Q8TBC4 463 aa18.17■□□□□ 0.5
PPP1CA-210ENST00000542876 GTPBP4Q9BZE4 634 aaKnown RBP18.17■□□□□ 0.5
PPP1CA-210ENST00000542876 PCED1AQ9H1Q7 454 aa18.17■□□□□ 0.5
PPP1CA-210ENST00000542876 CNGB3Q9NQW8 809 aa18.17■□□□□ 0.5
PPP1CA-210ENST00000542876 SFMBT1Q9UHJ3 866 aa18.17■□□□□ 0.5
PPP1CA-210ENST00000542876 RALYQ9UKM9 306 aaKnown RBP18.17■□□□□ 0.5
PPP1CA-210ENST00000542876 SRRM3A6NNA2 597 aaPredicted RBP18.16■□□□□ 0.5
PPP1CA-210ENST00000542876 HLA-EP13747 358 aa18.16■□□□□ 0.5
PPP1CA-210ENST00000542876 LCP1P13796 627 aa18.16■□□□□ 0.5
PPP1CA-210ENST00000542876 LRMPQ12912 555 aa18.16■□□□□ 0.5
PPP1CA-210ENST00000542876 TMEM215Q68D42 235 aa18.16■□□□□ 0.5
PPP1CA-210ENST00000542876 CHST9Q7L1S5 443 aa18.16■□□□□ 0.5
PPP1CA-210ENST00000542876 RAB44Q7Z6P3 723 aaPredicted RBP18.16■□□□□ 0.5
PPP1CA-210ENST00000542876 AHI1Q8N157 1196 aa18.16■□□□□ 0.5
PPP1CA-210ENST00000542876 SETD7Q8WTS6 366 aaKnown RBP18.16■□□□□ 0.5
PPP1CA-210ENST00000542876 KCTD13Q8WZ19 329 aa18.16■□□□□ 0.5
PPP1CA-210ENST00000542876 SNX19Q92543 992 aa18.16■□□□□ 0.5
PPP1CA-210ENST00000542876 GOLGA1Q92805 767 aa18.16■□□□□ 0.5
PPP1CA-210ENST00000542876 GSDMAQ96QA5 445 aa18.16■□□□□ 0.5
PPP1CA-210ENST00000542876 LHX5Q9H2C1 402 aa18.16■□□□□ 0.5
PPP1CA-210ENST00000542876 GAREM1Q9H706 876 aa18.16■□□□□ 0.5
PPP1CA-210ENST00000542876 GDPD2Q9HCC8 539 aa18.16■□□□□ 0.5
PPP1CA-210ENST00000542876 ABCB8Q9NUT2 735 aa18.16■□□□□ 0.5
PPP1CA-210ENST00000542876 EIF2B4Q9UI10 523 aaKnown RBP18.16■□□□□ 0.5
PPP1CA-210ENST00000542876 STOML2Q9UJZ1 356 aa18.16■□□□□ 0.5
PPP1CA-210ENST00000542876 APOBEC2Q9Y235 224 aaKnown RBP18.16■□□□□ 0.5
PPP1CA-210ENST00000542876 PCDH15Q96QU1 1955 aa18.16■□□□□ 0.5
PPP1CA-210ENST00000542876 YJEFN3A6XGL0 299 aa18.15■□□□□ 0.5
PPP1CA-210ENST00000542876 E7ENQ6 273 aa18.15■□□□□ 0.5
PPP1CA-210ENST00000542876 O00370 1275 aa18.15■□□□□ 0.5
PPP1CA-210ENST00000542876 ATP5BP06576 529 aaKnown RBP18.15■□□□□ 0.5
PPP1CA-210ENST00000542876 FTH1P19P0C7X4 201 aa18.15■□□□□ 0.5
PPP1CA-210ENST00000542876 HLA-FP30511 346 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms