RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 TMEM214Q6NUQ4 689 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 ZNF600Q6ZNG1 722 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 ZNF677Q86XU0 584 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 KIAA0319LQ8IZA0 1049 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 TOR1AIP2Q8NFQ8 470 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 LENG1Q96BZ8 264 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 SLC7A6OSQ96CW6 309 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 XAB2Q9HCS7 855 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 RNF19AQ9NV58 838 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 PFDN2Q9UHV9 154 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 GJD2Q9UKL4 321 aa8.26□□□□□ -1.09
PDLIM5-221ENST00000542407 SPECC1L-ADORA2AF8WAN1 911 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 HAT1O14929 419 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 ZW10O43264 779 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 F2P00734 622 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 LYNP07948 512 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 KRT5P13647 590 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 FOXN2P32314 431 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 NEK3P51956 506 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 ACAD10Q6JQN1 1059 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 RGMBQ6NW40 437 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 TMEM130Q8N3G9 435 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 CD101Q93033 1021 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 TUBGCP5Q96RT8 1024 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 PPP1R16BQ96T49 567 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 CENPKQ9BS16 269 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 HERC2P3Q9BVR0 1158 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 SERHL2Q9H4I8 314 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 SLCO1B3Q9NPD5 702 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 ARHGEF38Q9NXL2 777 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 IL20Q9NYY1 176 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 MOCS1Q9NZB8 636 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 SCHIP1Q9P0W5 487 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 HMGXB4Q9UGU5 601 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 CHORDC1Q9UHD1 332 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 TRIM64A6NGJ6 449 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 TRIM64BA6NI03 449 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 TBX10O75333 385 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 SPAG7O75391 227 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 CXCL8P10145 99 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 MCF2P10911 925 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 PYGMP11217 842 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 CDK4P11802 303 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 ARF4P18085 180 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 TBXAS1P24557 533 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 ASPAP45381 313 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 MYL6P60660 151 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 ADAM17P78536 824 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 CENPCQ03188 943 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 TBL3Q12788 808 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 SURF1Q15526 300 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 CORO6Q6QEF8 472 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 CCDC105Q8IYK2 499 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 THNSL1Q8IYQ7 743 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 CPB2Q96IY4 423 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 DNAJC1Q96KC8 554 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 PLVAPQ9BX97 442 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 ADAMTS10Q9H324 1103 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 ALG2Q9H553 416 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 PLEKHA5Q9HAU0 1116 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 IL1RAPL1Q9NZN1 696 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 SIX4Q9UIU6 781 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 AKT3Q9Y243 479 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 DOCK3Q8IZD9 2030 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 MBLAC1A4D2B0 266 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 SIGLEC16A6NMB1 481 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 HAS3O00219 553 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 GPR32O75388 356 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 DGKIO75912 1065 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 T-ENOLP0DO92 83 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 POLR2EP19388 210 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 TAC1P20366 129 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 SERPINB3P29508 390 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 EVI2BP34910 448 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 COPAP53621 1224 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 SLC34A1Q06495 639 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 DUOXA2Q1HG44 320 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 LIN52Q52LA3 116 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 ARMC4Q5T2S8 1044 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 C4orf50Q6ZRC1 276 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 MON1BQ7L1V2 547 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 ZNF598Q86UK7 904 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 RIBC1Q8N443 379 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 RSAD2Q8WXG1 361 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 ALG3Q92685 438 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 INPP5DQ92835 1189 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 GATA6Q92908 595 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 MCUR1Q96AQ8 359 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 MAGEB18Q96M61 343 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 FAM161BQ96MY7 647 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 ZSWIM1Q9BR11 485 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 CYLDQ9NQC7 956 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 GRHL1Q9NZI5 618 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 MOSPD1Q9UJG1 213 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 ZFP69BQ9UJL9 534 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 PHTF1Q9UMS5 762 aa8.25□□□□□ -1.09
PDLIM5-221ENST00000542407 RALGAPA2Q2PPJ7 1873 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 FAM187AA6NFU0 413 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 CCDC160A6NGH7 325 aa8.24□□□□□ -1.09
PDLIM5-221ENST00000542407 INMTO95050 263 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms