RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 TOE1Q96GM8 510 aaKnown RBP20.76■□□□□ 0.91
DDX11-220ENST00000542244 CAMK1GQ96NX5 476 aa20.76■□□□□ 0.91
DDX11-220ENST00000542244 CIPCQ9C0C6 399 aa20.76■□□□□ 0.91
DDX11-220ENST00000542244 PRDM16Q9HAZ2 1276 aa20.76■□□□□ 0.91
DDX11-220ENST00000542244 WSB2Q9NYS7 404 aaPredicted RBP20.76■□□□□ 0.91
DDX11-220ENST00000542244 USP36Q9P275 1121 aaKnown RBP20.76■□□□□ 0.91
DDX11-220ENST00000542244 PCDHB4Q9Y5E5 795 aa20.76■□□□□ 0.91
DDX11-220ENST00000542244 GADD45BO75293 160 aaPredicted RBP20.75■□□□□ 0.91
DDX11-220ENST00000542244 SMC2O95347 1197 aa20.75■□□□□ 0.91
DDX11-220ENST00000542244 CD59P13987 128 aa20.75■□□□□ 0.91
DDX11-220ENST00000542244 RFWD3Q6PCD5 774 aa20.75■□□□□ 0.91
DDX11-220ENST00000542244 LCLAT1Q6UWP7 414 aa20.75■□□□□ 0.91
DDX11-220ENST00000542244 TMPRSS6Q8IU80 811 aa20.75■□□□□ 0.91
DDX11-220ENST00000542244 SLC35F5Q8WV83 523 aa20.75■□□□□ 0.91
DDX11-220ENST00000542244 KCTD13Q8WZ19 329 aa20.75■□□□□ 0.91
DDX11-220ENST00000542244 GPR174Q9BXC1 333 aa20.75■□□□□ 0.91
DDX11-220ENST00000542244 DNAI2Q9GZS0 605 aa20.75■□□□□ 0.91
DDX11-220ENST00000542244 ITM2CQ9NQX7 267 aa20.75■□□□□ 0.91
DDX11-220ENST00000542244 HESX1Q9UBX0 185 aa20.75■□□□□ 0.91
DDX11-220ENST00000542244 CACNA1EQ15878 2313 aa20.75■□□□□ 0.91
DDX11-220ENST00000542244 BIN1O00499 593 aa20.74■□□□□ 0.91
DDX11-220ENST00000542244 ARHGAP33O14559 1287 aa20.74■□□□□ 0.91
DDX11-220ENST00000542244 NCAM1P13591 858 aa20.74■□□□□ 0.91
DDX11-220ENST00000542244 CD6P30203 668 aa20.74■□□□□ 0.91
DDX11-220ENST00000542244 SLC6A4P31645 630 aa20.74■□□□□ 0.91
DDX11-220ENST00000542244 TPMTP51580 245 aa20.74■□□□□ 0.91
DDX11-220ENST00000542244 STX17P56962 302 aa20.74■□□□□ 0.91
DDX11-220ENST00000542244 GFPT1Q06210 699 aaPredicted RBP20.74■□□□□ 0.91
DDX11-220ENST00000542244 RGL4Q8IZJ4 473 aa20.74■□□□□ 0.91
DDX11-220ENST00000542244 KREMEN1Q96MU8 473 aa20.74■□□□□ 0.91
DDX11-220ENST00000542244 TIGD1Q96MW7 591 aa20.74■□□□□ 0.91
DDX11-220ENST00000542244 IPO9Q96P70 1041 aaKnown RBP20.74■□□□□ 0.91
DDX11-220ENST00000542244 SCNM1Q9BWG6 230 aa20.74■□□□□ 0.91
DDX11-220ENST00000542244 MTG2Q9H4K7 406 aa20.74■□□□□ 0.91
DDX11-220ENST00000542244 FAM124BQ9H5Z6 455 aaPredicted RBP20.74■□□□□ 0.91
DDX11-220ENST00000542244 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.74■□□□□ 0.91
DDX11-220ENST00000542244 AKAP13Q12802 2813 aa20.74■□□□□ 0.91
DDX11-220ENST00000542244 MUC22E2RYF6 1773 aaPredicted RBP20.73■□□□□ 0.91
DDX11-220ENST00000542244 GOLGA6L4A6NEF3 574 aa20.73■□□□□ 0.91
DDX11-220ENST00000542244 HYAL3O43820 417 aaPredicted RBP20.73■□□□□ 0.91
DDX11-220ENST00000542244 NDUFS2O75306 463 aa20.73■□□□□ 0.91
DDX11-220ENST00000542244 CYBBP04839 570 aa20.73■□□□□ 0.91
DDX11-220ENST00000542244 FYNP06241 537 aa20.73■□□□□ 0.91
DDX11-220ENST00000542244 HOXD12P35452 270 aa20.73■□□□□ 0.91
DDX11-220ENST00000542244 SLC8A3P57103 927 aa20.73■□□□□ 0.91
DDX11-220ENST00000542244 BNC1Q01954 994 aa20.73■□□□□ 0.91
DDX11-220ENST00000542244 NADSYN1Q6IA69 706 aa20.73■□□□□ 0.91
DDX11-220ENST00000542244 ADIPOR2Q86V24 386 aa20.73■□□□□ 0.91
DDX11-220ENST00000542244 SIX6OS1Q8N1H7 587 aa20.73■□□□□ 0.91
DDX11-220ENST00000542244 PPM1KQ8N3J5 372 aa20.73■□□□□ 0.91
DDX11-220ENST00000542244 CEP76Q8TAP6 659 aa20.73■□□□□ 0.91
DDX11-220ENST00000542244 RNF139Q8WU17 664 aa20.73■□□□□ 0.91
DDX11-220ENST00000542244 NELFBQ8WX92 580 aa20.73■□□□□ 0.91
DDX11-220ENST00000542244 ABCB8Q9NUT2 735 aa20.73■□□□□ 0.91
DDX11-220ENST00000542244 STOML2Q9UJZ1 356 aa20.73■□□□□ 0.91
DDX11-220ENST00000542244 CTNND2Q9UQB3 1225 aa20.73■□□□□ 0.91
DDX11-220ENST00000542244 HBS1LQ9Y450 684 aaKnown RBP20.73■□□□□ 0.91
DDX11-220ENST00000542244 M0QYV0 167 aa20.72■□□□□ 0.91
DDX11-220ENST00000542244 ZBTB24O43167 697 aaPredicted RBP20.72■□□□□ 0.91
DDX11-220ENST00000542244 GJB3O75712 270 aa20.72■□□□□ 0.91
DDX11-220ENST00000542244 IGLV3-27P01718 113 aa20.72■□□□□ 0.91
DDX11-220ENST00000542244 EPHX1P07099 455 aa20.72■□□□□ 0.91
DDX11-220ENST00000542244 SETSIPP0DME0 302 aa20.72■□□□□ 0.91
DDX11-220ENST00000542244 CD70P32970 193 aa20.72■□□□□ 0.91
DDX11-220ENST00000542244 STARD3Q14849 445 aa20.72■□□□□ 0.91
DDX11-220ENST00000542244 PTPRNQ16849 979 aa20.72■□□□□ 0.91
DDX11-220ENST00000542244 PLEKHG6Q3KR16 790 aa20.72■□□□□ 0.91
DDX11-220ENST00000542244 CCDC40Q4G0X9 1142 aa20.72■□□□□ 0.91
DDX11-220ENST00000542244 MPPE1Q53F39 396 aa20.72■□□□□ 0.91
DDX11-220ENST00000542244 FAM133BQ5BKY9 247 aaKnown RBP20.72■□□□□ 0.91
DDX11-220ENST00000542244 CHST9Q7L1S5 443 aa20.72■□□□□ 0.91
DDX11-220ENST00000542244 METTL3Q86U44 580 aaKnown RBP20.72■□□□□ 0.91
DDX11-220ENST00000542244 FAM124AQ86V42 546 aa20.72■□□□□ 0.91
DDX11-220ENST00000542244 SIPA1Q96FS4 1042 aa20.72■□□□□ 0.91
DDX11-220ENST00000542244 CCDC34Q96HJ3 373 aa20.72■□□□□ 0.91
DDX11-220ENST00000542244 DHTKD1Q96HY7 919 aaPredicted RBP20.72■□□□□ 0.91
DDX11-220ENST00000542244 NT5C1BQ96P26 610 aa20.72■□□□□ 0.91
DDX11-220ENST00000542244 MIS12Q9H081 205 aa20.72■□□□□ 0.91
DDX11-220ENST00000542244 IL21RQ9HBE5 538 aa20.72■□□□□ 0.91
DDX11-220ENST00000542244 CNGB3Q9NQW8 809 aa20.72■□□□□ 0.91
DDX11-220ENST00000542244 ABCC13Q9NSE7 274 aa20.72■□□□□ 0.91
DDX11-220ENST00000542244 OLA1Q9NTK5 396 aaKnown RBP20.72■□□□□ 0.91
DDX11-220ENST00000542244 PSMA7O14818 248 aa20.71■□□□□ 0.91
DDX11-220ENST00000542244 PROS1P07225 676 aa20.71■□□□□ 0.91
DDX11-220ENST00000542244 PAEPP09466 180 aa20.71■□□□□ 0.91
DDX11-220ENST00000542244 TBXAS1P24557 533 aaPredicted RBP20.71■□□□□ 0.91
DDX11-220ENST00000542244 HARS2P49590 506 aaKnown RBP20.71■□□□□ 0.91
DDX11-220ENST00000542244 ZNF132P52740 706 aa20.71■□□□□ 0.91
DDX11-220ENST00000542244 YWHAEP62258 255 aaKnown RBP20.71■□□□□ 0.91
DDX11-220ENST00000542244 SIM1P81133 766 aaPredicted RBP20.71■□□□□ 0.91
DDX11-220ENST00000542244 MORC3Q14149 939 aa20.71■□□□□ 0.91
DDX11-220ENST00000542244 CNGA2Q16280 664 aa20.71■□□□□ 0.91
DDX11-220ENST00000542244 ADGRF1Q5T601 910 aa20.71■□□□□ 0.91
DDX11-220ENST00000542244 MSANTD2Q6P1R3 559 aa20.71■□□□□ 0.91
DDX11-220ENST00000542244 UNQ6494/PRO21346Q6UXR6 183 aa20.71■□□□□ 0.91
DDX11-220ENST00000542244 KIAA0907Q7Z7F0 614 aaPredicted RBP20.71■□□□□ 0.91
DDX11-220ENST00000542244 SCML4Q8N228 414 aa20.71■□□□□ 0.91
DDX11-220ENST00000542244 ZCCHC9Q8N567 271 aaKnown RBP20.71■□□□□ 0.91
DDX11-220ENST00000542244 TMA16Q96EY4 203 aaKnown RBP20.71■□□□□ 0.91
DDX11-220ENST00000542244 LMLNQ96KR4 655 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms