RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 SEMA3BQ13214 749 aa17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 MFSD5Q6N075 450 aa17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.84■□□□□ 0.452e-6■■■□□ 16.2
TMEM50B-210ENST00000542230 PCGF5Q86SE9 256 aa17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 ROPN1BQ9BZX4 212 aaPredicted RBP17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 HIPK3Q9H422 1215 aa17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 WDCPQ9H6R7 721 aa17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 ROPN1Q9HAT0 212 aaPredicted RBP17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 KANSL3Q9P2N6 904 aa17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 CHMP2BQ9UQN3 213 aa17.84■□□□□ 0.45
TMEM50B-210ENST00000542230 POC1B-GALNT4F8VUJ3 575 aa17.83■□□□□ 0.45
TMEM50B-210ENST00000542230 TMEM189-UBE2V1I3L0A0 370 aa17.83■□□□□ 0.45
TMEM50B-210ENST00000542230 AGTP01019 485 aa17.83■□□□□ 0.45
TMEM50B-210ENST00000542230 ERCC2P18074 760 aa17.83■□□□□ 0.45
TMEM50B-210ENST00000542230 HNRNPH2P55795 449 aaKnown RBP17.83■□□□□ 0.45
TMEM50B-210ENST00000542230 ARL4CP56559 192 aa17.83■□□□□ 0.45
TMEM50B-210ENST00000542230 DEPDC1BQ8WUY9 529 aa17.83■□□□□ 0.45
TMEM50B-210ENST00000542230 SEPT8Q92599 483 aa17.83■□□□□ 0.45
TMEM50B-210ENST00000542230 QKIQ96PU8 341 aaKnown RBP eCLIP17.83■□□□□ 0.45
TMEM50B-210ENST00000542230 FOXP3Q9BZS1 431 aa17.83■□□□□ 0.45
TMEM50B-210ENST00000542230 TBKBP1A7MCY6 615 aa17.83■□□□□ 0.44
TMEM50B-210ENST00000542230 PITPNM1O00562 1244 aa17.83■□□□□ 0.44
TMEM50B-210ENST00000542230 DCLK1O15075 740 aa17.83■□□□□ 0.44
TMEM50B-210ENST00000542230 MMP13P45452 471 aa17.83■□□□□ 0.44
TMEM50B-210ENST00000542230 CXCR3P49682 368 aa17.83■□□□□ 0.44
TMEM50B-210ENST00000542230 YWHAGP61981 247 aaKnown RBP eCLIP17.83■□□□□ 0.44
TMEM50B-210ENST00000542230 TLE2Q04725 743 aa17.83■□□□□ 0.44
TMEM50B-210ENST00000542230 TRIM60Q495X7 471 aa17.83■□□□□ 0.44
TMEM50B-210ENST00000542230 CTXN3Q4LDR2 81 aa17.83■□□□□ 0.44
TMEM50B-210ENST00000542230 RTP2Q5QGT7 225 aa17.83■□□□□ 0.44
TMEM50B-210ENST00000542230 LEKR1Q6ZMV7 388 aa17.83■□□□□ 0.44
TMEM50B-210ENST00000542230 PYROXD1Q8WU10 500 aa17.83■□□□□ 0.44
TMEM50B-210ENST00000542230 CASP10Q92851 521 aa17.83■□□□□ 0.44
TMEM50B-210ENST00000542230 ARHGEF2Q92974 986 aaKnown RBP17.83■□□□□ 0.44
TMEM50B-210ENST00000542230 SERPINB12Q96P63 405 aa17.83■□□□□ 0.44
TMEM50B-210ENST00000542230 PRDM12Q9H4Q4 367 aa17.83■□□□□ 0.44
TMEM50B-210ENST00000542230 PIH1D1Q9NWS0 290 aaKnown RBP17.83■□□□□ 0.44
TMEM50B-210ENST00000542230 LRFN2Q9ULH4 789 aa17.83■□□□□ 0.44
TMEM50B-210ENST00000542230 ZMYND8Q9ULU4 1186 aaPredicted RBP17.83■□□□□ 0.44
TMEM50B-210ENST00000542230 EXOC1LA0A1B0GW35 172 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 A0A1W2PQH9 124 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 H3BRJ5 948 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 CHN1P15882 459 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 ELK3P41970 407 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 AP1B1Q10567 949 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 MPP2Q14168 576 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 MAPRE1Q15691 268 aaKnown RBP17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 C4orf50Q6ZRC1 276 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 CAND1Q86VP6 1230 aaKnown RBP17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 CCNYQ8ND76 341 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 BCAS4Q8TDM0 211 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 VWCEQ96DN2 955 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 PGAP3Q96FM1 320 aaPredicted RBP17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 FAM107BQ9H098 131 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 SIK2Q9H0K1 926 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 MLXIPLQ9NP71 852 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 EURLQ9NYK6 297 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 SEPT10Q9P0V9 454 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 PAK5Q9P286 719 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 OR12D3Q9UGF7 316 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 CDH23Q9H251 3354 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 E7ESA3 106 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 VNN2O95498 520 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 ZFXP17010 805 aaPredicted RBP17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 NR2C2P49116 596 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 C3orf62Q6ZUJ4 267 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 DENND5BQ6ZUT9 1274 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 PSTKQ8IV42 348 aaKnown RBP17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 CDKL3Q8IVW4 592 aaPredicted RBP17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 TFB1MQ8WVM0 346 aaKnown RBP17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 RNF34Q969K3 372 aa17.82■□□□□ 0.44
TMEM50B-210ENST00000542230 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 A0A087WUV0 522 aaPredicted RBP17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 KCNK1O00180 336 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 CAPN15O75808 1086 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 LRIG2O94898 1065 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 ALDH2P05091 517 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 SRGAP2BP0DMP2 458 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 SCAPQ12770 1279 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 TMED2Q15363 201 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 HEATR6Q6AI08 1181 aaKnown RBP17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 SLC39A5Q6ZMH5 540 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 PDIK1LQ8N165 341 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 HTR3CQ8WXA8 447 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 IRGQQ8WZA9 623 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 NTAN1Q96AB6 310 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 P2RY11Q96G91 374 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 SLC9A7Q96T83 725 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 ELAC1Q9H777 363 aaKnown RBP17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 KIF9Q9HAQ2 790 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 TCEA3O75764 348 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 GALTP07902 379 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 ABHD2P08910 425 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 TPI1P60174 286 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 XRCC4Q13426 336 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 OLIG2Q13516 323 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 PRSS55Q6UWB4 352 aaPredicted RBP17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 ARFGAP2Q8N6H7 521 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 PLAC1Q9HBJ0 212 aa17.81■□□□□ 0.44
TMEM50B-210ENST00000542230 RCOR3Q9P2K3 495 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms