RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 KLRC3Q07444 240 aa9.31□□□□□ -0.92
MRPS35-204ENST00000542199 LRRC26Q2I0M4 334 aa9.31□□□□□ -0.92
MRPS35-204ENST00000542199 RABL3Q5HYI8 236 aa9.31□□□□□ -0.92
MRPS35-204ENST00000542199 LRRC55Q6ZSA7 311 aa9.31□□□□□ -0.92
MRPS35-204ENST00000542199 TMPRSS6Q8IU80 811 aa9.31□□□□□ -0.92
MRPS35-204ENST00000542199 CFAP52Q8N1V2 620 aa9.31□□□□□ -0.92
MRPS35-204ENST00000542199 IL17DQ8TAD2 202 aa9.31□□□□□ -0.92
MRPS35-204ENST00000542199 EXTL1Q92935 676 aa9.31□□□□□ -0.92
MRPS35-204ENST00000542199 MPHOSPH6Q99547 160 aaKnown RBP9.31□□□□□ -0.92
MRPS35-204ENST00000542199 SLF1Q9BQI6 1058 aa9.31□□□□□ -0.92
MRPS35-204ENST00000542199 REXO4Q9GZR2 422 aaKnown RBP9.31□□□□□ -0.92
MRPS35-204ENST00000542199 ZMYND8Q9ULU4 1186 aaPredicted RBP9.31□□□□□ -0.92
MRPS35-204ENST00000542199 ATP11BQ9Y2G3 1177 aa9.31□□□□□ -0.92
MRPS35-204ENST00000542199 ALPK3Q96L96 1907 aa9.31□□□□□ -0.92
MRPS35-204ENST00000542199 F8W8V4 182 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 DNM1LO00429 736 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 ATP2A1O14983 1001 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 SEPT4O43236 478 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 VPS4BO75351 444 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 TTLL1O95922 423 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 GRPP07492 148 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 PIM1P11309 404 aaPredicted RBP9.3□□□□□ -0.92
MRPS35-204ENST00000542199 ZNF20P17024 532 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 MAGEA10P43363 369 aaPredicted RBP9.3□□□□□ -0.92
MRPS35-204ENST00000542199 ALDH5A1P51649 535 aaPredicted RBP9.3□□□□□ -0.92
MRPS35-204ENST00000542199 SLC13A2Q13183 592 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 ANKRD45Q5TZF3 282 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 TICAM2Q86XR7 235 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 ZNF444Q8N0Y2 327 aaPredicted RBP9.3□□□□□ -0.92
MRPS35-204ENST00000542199 GMCL1P1Q8NEA9 526 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 FAM46DQ8NEK8 389 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 DVL3Q92997 716 aaPredicted RBP9.3□□□□□ -0.92
MRPS35-204ENST00000542199 LRIG1Q96JA1 1093 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 DCLRE1CQ96SD1 692 aaKnown RBP9.3□□□□□ -0.92
MRPS35-204ENST00000542199 TEX13BQ9BXU2 312 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 ZNF700Q9H0M5 742 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 NAPBQ9H115 298 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 RNPEPQ9H4A4 650 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 COL20A1Q9P218 1284 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 FNIP2Q9P278 1114 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 CLIP2Q9UDT6 1046 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 NRBP1Q9UHY1 535 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.3□□□□□ -0.92
MRPS35-204ENST00000542199 CHD9Q3L8U1 2897 aa9.3□□□□□ -0.92
MRPS35-204ENST00000542199 TTC28Q96AY4 2481 aa9.29□□□□□ -0.92
MRPS35-204ENST00000542199 MYH8P13535 1937 aa9.29□□□□□ -0.92
MRPS35-204ENST00000542199 SPTBN5Q9NRC6 3674 aaKnown RBP9.29□□□□□ -0.92
MRPS35-204ENST00000542199 TMEM233B4DJY2 109 aa9.29□□□□□ -0.92
MRPS35-204ENST00000542199 PGK2P07205 417 aa9.29□□□□□ -0.92
MRPS35-204ENST00000542199 CHRM3P20309 590 aa9.29□□□□□ -0.92
MRPS35-204ENST00000542199 PDE1AP54750 535 aa9.29□□□□□ -0.92
MRPS35-204ENST00000542199 UCP3P55916 312 aa9.29□□□□□ -0.92
MRPS35-204ENST00000542199 ADAM17P78536 824 aa9.29□□□□□ -0.92
MRPS35-204ENST00000542199 CTBP1Q13363 440 aa9.29□□□□□ -0.92
MRPS35-204ENST00000542199 KCTD2Q14681 263 aa9.29□□□□□ -0.92
MRPS35-204ENST00000542199 USP39Q53GS9 565 aaKnown RBP9.29□□□□□ -0.92
MRPS35-204ENST00000542199 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.29□□□□□ -0.92
MRPS35-204ENST00000542199 CCDC129Q6ZRS4 1044 aa9.29□□□□□ -0.92
MRPS35-204ENST00000542199 PPP1R32Q7Z5V6 425 aa9.29□□□□□ -0.92
MRPS35-204ENST00000542199 EVI5LQ96CN4 794 aa9.29□□□□□ -0.92
MRPS35-204ENST00000542199 PNKPQ96T60 521 aa9.29□□□□□ -0.92
MRPS35-204ENST00000542199 SLC38A10Q9HBR0 1119 aa9.29□□□□□ -0.92
MRPS35-204ENST00000542199 ETAA1Q9NY74 926 aa9.29□□□□□ -0.92
MRPS35-204ENST00000542199 CEP72Q9P209 647 aa9.29□□□□□ -0.92
MRPS35-204ENST00000542199 PARP14Q460N5 1801 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 DIRC3C9JPN6 131 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 NCR1O76036 304 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 CHEK2O96017 543 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 SLC3A2P08195 630 aaKnown RBP9.28□□□□□ -0.92
MRPS35-204ENST00000542199 TSPY3P0CV98 308 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 TSPY8P0CW00 308 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 SERPINB3P29508 390 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 NOVP48745 357 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 SLC11A2P49281 568 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 CASP5P51878 434 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 OAZ1P54368 228 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 RPS16P62249 146 aaKnown RBP9.28□□□□□ -0.92
MRPS35-204ENST00000542199 TFAP4Q01664 338 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 EFEMP1Q12805 493 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 BOP1Q14137 746 aaKnown RBP9.28□□□□□ -0.92
MRPS35-204ENST00000542199 BRD3Q15059 726 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 ALX1Q15699 326 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 PRAMEF19Q5SWL8 479 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 VPS53Q5VIR6 699 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 SNRNP48Q6IEG0 339 aaKnown RBP9.28□□□□□ -0.92
MRPS35-204ENST00000542199 TAPT1Q6NXT6 567 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 LIX1LQ8IVB5 337 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 SMC5Q8IY18 1101 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 ZNF483Q8TF39 744 aaPredicted RBP9.28□□□□□ -0.92
MRPS35-204ENST00000542199 CNPPD1Q9BV87 410 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 HELLSQ9NRZ9 838 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 AFF4Q9UHB7 1163 aaKnown RBP9.28□□□□□ -0.92
MRPS35-204ENST00000542199 ANAPC4Q9UJX5 808 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 FEM1BQ9UK73 627 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 RIPK3Q9Y572 518 aa9.28□□□□□ -0.92
MRPS35-204ENST00000542199 TRIM43BA6NCK2 446 aa9.27□□□□□ -0.93
MRPS35-204ENST00000542199 ORC4O43929 436 aa9.27□□□□□ -0.93
MRPS35-204ENST00000542199 TBC1D4O60343 1298 aa9.27□□□□□ -0.93
MRPS35-204ENST00000542199 ZBED4O75132 1171 aa9.27□□□□□ -0.93
MRPS35-204ENST00000542199 RECQL4O94761 1208 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms