RNA–Protein interactions for RNA: ENST00000541869.5

POLR1B-217, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 5,059 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-217ENST00000541869 COBLL1Q53SF7 1204 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 RAET1GQ6H3X3 334 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 CLYBLQ8N0X4 340 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 MYO1HQ8N1T3 1032 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 ZSCAN18Q8TBC5 510 aaPredicted RBP10.6□□□□□ -0.71
POLR1B-217ENST00000541869 POF1BQ8WVV4 589 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 NSUN3Q9H649 340 aaKnown RBP10.6□□□□□ -0.71
POLR1B-217ENST00000541869 PCMTD2Q9NV79 361 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 ZC3H7BQ9UGR2 993 aaKnown RBP10.6□□□□□ -0.71
POLR1B-217ENST00000541869 PTPRJQ12913 1337 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 GRM6O15303 877 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 CCDC130P13994 396 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 ARHGDIAP52565 204 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 VMP1Q96GC9 406 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 CYTH2Q99418 400 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 ATP13A3Q9H7F0 1226 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 DNAJC18Q9H819 358 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 TXLNGQ9NUQ3 528 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 EPS15L1Q9UBC2 864 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 ZNF711Q9Y462 761 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 TARSL2A2RTX5 802 aaKnown RBP10.6□□□□□ -0.71
POLR1B-217ENST00000541869 CTIFO43310 598 aaKnown RBP10.6□□□□□ -0.71
POLR1B-217ENST00000541869 TMPRSS15P98073 1019 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 SLC6A3Q01959 620 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 ILF3Q12906 894 aaKnown RBP eCLIP10.6□□□□□ -0.71
POLR1B-217ENST00000541869 GRM3Q14832 879 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 TMCO4Q5TGY1 634 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 MYLPFQ96A32 169 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 KIAA1143Q96AT1 154 aaPredicted RBP10.6□□□□□ -0.71
POLR1B-217ENST00000541869 NXF3Q9H4D5 531 aaKnown RBP10.6□□□□□ -0.71
POLR1B-217ENST00000541869 XAB2Q9HCS7 855 aaKnown RBP10.6□□□□□ -0.71
POLR1B-217ENST00000541869 C20orf96Q9NUD7 363 aaPredicted RBP10.6□□□□□ -0.71
POLR1B-217ENST00000541869 RGS17Q9UGC6 210 aaPredicted RBP10.6□□□□□ -0.71
POLR1B-217ENST00000541869 PTPRZ1P23471 2315 aaPredicted RBP10.6□□□□□ -0.71
POLR1B-217ENST00000541869 SCAMP3O14828 347 aaKnown RBP10.6□□□□□ -0.71
POLR1B-217ENST00000541869 SRP72O76094 671 aaKnown RBP10.6□□□□□ -0.71
POLR1B-217ENST00000541869 AKT2P31751 481 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 ATP1A2P50993 1020 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 PUS10Q3MIT2 529 aaKnown RBP10.6□□□□□ -0.71
POLR1B-217ENST00000541869 SNAP47Q5SQN1 464 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 ALS2CLQ60I27 953 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 PTAR1Q7Z6K3 402 aaPredicted RBP10.6□□□□□ -0.71
POLR1B-217ENST00000541869 DEFB106AQ8N104 65 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 HMGB4Q8WW32 186 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 LRRC37BQ96QE4 947 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 FOXP3Q9BZS1 431 aa10.6□□□□□ -0.71
POLR1B-217ENST00000541869 MAFBQ9Y5Q3 323 aaPredicted RBP10.6□□□□□ -0.71
POLR1B-217ENST00000541869 PHF2O75151 1096 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 SPAG6O75602 509 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 EVX2Q03828 476 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 FOXD4Q12950 439 aaPredicted RBP10.59□□□□□ -0.71
POLR1B-217ENST00000541869 ERMARDQ5T6L9 678 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 LDLRAD1Q5T700 205 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 LRRC69Q6ZNQ3 347 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 ACAD11Q709F0 780 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 IFNLR1Q8IU57 520 aaPredicted RBP10.59□□□□□ -0.71
POLR1B-217ENST00000541869 BEND7Q8N7W2 519 aaPredicted RBP10.59□□□□□ -0.71
POLR1B-217ENST00000541869 ELMO2Q96JJ3 720 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 SLC13A1Q9BZW2 595 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 RNF19AQ9NV58 838 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 CPSF2Q9P2I0 782 aaKnown RBP10.59□□□□□ -0.71
POLR1B-217ENST00000541869 XPO7Q9UIA9 1087 aaKnown RBP10.59□□□□□ -0.71
POLR1B-217ENST00000541869 TDRKHQ9Y2W6 561 aaKnown RBP10.59□□□□□ -0.71
POLR1B-217ENST00000541869 B4GALT5O43286 388 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 OR56A5P0C7T3 313 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 SEC13P55735 322 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 UGCGQ16739 394 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 EEF1DP3Q658K8 133 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 SLC39A5Q6ZMH5 540 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 MARK2Q7KZI7 788 aaKnown RBP10.59□□□□□ -0.71
POLR1B-217ENST00000541869 C2orf15Q8WU43 125 aaKnown RBP10.59□□□□□ -0.71
POLR1B-217ENST00000541869 HLA-CQ95604 372 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 TTC17Q96AE7 1141 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 VCPIP1Q96JH7 1222 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 EML4Q9HC35 981 aaKnown RBP10.59□□□□□ -0.71
POLR1B-217ENST00000541869 TBC1D13Q9NVG8 400 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 IGF2BP3O00425 579 aaKnown RBP eCLIP10.59□□□□□ -0.71
POLR1B-217ENST00000541869 TRIM16O95361 564 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 CCNE2O96020 404 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 PRNPP04156 253 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 SPRP35270 261 aaPredicted RBP10.59□□□□□ -0.71
POLR1B-217ENST00000541869 RFX3P48380 749 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 SERPINB9P50453 376 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 GNGT1P63211 74 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 SF3A3Q12874 501 aaKnown RBP eCLIP10.59□□□□□ -0.712e-7■■■■■ 27.2
POLR1B-217ENST00000541869 USP10Q14694 798 aaKnown RBP10.59□□□□□ -0.71
POLR1B-217ENST00000541869 CLEC16AQ2KHT3 1053 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 DDIASQ8IXT1 998 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 NPLOC4Q8TAT6 608 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 ATOH1Q92858 354 aaPredicted RBP10.59□□□□□ -0.71
POLR1B-217ENST00000541869 NELL2Q99435 816 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 CHP1Q99653 195 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 CNPPD1Q9BV87 410 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 RBM22Q9NW64 420 aaKnown RBP eCLIP10.59□□□□□ -0.713e-7■■■■□ 20.5
POLR1B-217ENST00000541869 CCDC189A1A4V9 331 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 RASA4BC9J798 803 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 F8VZ95 297 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 RASA4O43374 803 aa10.59□□□□□ -0.71
POLR1B-217ENST00000541869 ZNF500O60304 480 aaPredicted RBP10.59□□□□□ -0.71
POLR1B-217ENST00000541869 SPARCL1Q14515 664 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms