RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 ZNF487B1APH4 448 aa9□□□□□ -0.97
THBS3-210ENST00000541576 APOC4-APOC2K7ER74 178 aa9□□□□□ -0.97
THBS3-210ENST00000541576 AGPSO00116 658 aa9□□□□□ -0.97
THBS3-210ENST00000541576 LIASO43766 372 aa9□□□□□ -0.97
THBS3-210ENST00000541576 APOC2P02655 101 aa9□□□□□ -0.97
THBS3-210ENST00000541576 ATF2P15336 505 aa9□□□□□ -0.97
THBS3-210ENST00000541576 ATF6P18850 670 aa9□□□□□ -0.97
THBS3-210ENST00000541576 GBP1P32455 592 aa9□□□□□ -0.97
THBS3-210ENST00000541576 CLNS1AP54105 237 aaKnown RBP9□□□□□ -0.97
THBS3-210ENST00000541576 MTMR3Q13615 1198 aa9□□□□□ -0.97
THBS3-210ENST00000541576 BYSLQ13895 437 aaKnown RBP9□□□□□ -0.97
THBS3-210ENST00000541576 PPP1R7Q15435 360 aa9□□□□□ -0.97
THBS3-210ENST00000541576 ARL13BQ3SXY8 428 aa9□□□□□ -0.97
THBS3-210ENST00000541576 ANKRD20A8PQ5CZ79 823 aa9□□□□□ -0.97
THBS3-210ENST00000541576 NAIF1Q69YI7 327 aaPredicted RBP9□□□□□ -0.97
THBS3-210ENST00000541576 DRICH1Q6PGQ1 229 aaPredicted RBP9□□□□□ -0.97
THBS3-210ENST00000541576 PRUNE1Q86TP1 453 aa9□□□□□ -0.97
THBS3-210ENST00000541576 GPR65Q8IYL9 337 aa9□□□□□ -0.97
THBS3-210ENST00000541576 ACTL9Q8TC94 416 aa9□□□□□ -0.97
THBS3-210ENST00000541576 SP7Q8TDD2 431 aaPredicted RBP9□□□□□ -0.97
THBS3-210ENST00000541576 GIPC2Q8TF65 315 aa9□□□□□ -0.97
THBS3-210ENST00000541576 DPF3Q92784 378 aa9□□□□□ -0.97
THBS3-210ENST00000541576 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9□□□□□ -0.97
THBS3-210ENST00000541576 COMMD8Q9NX08 183 aa9□□□□□ -0.97
THBS3-210ENST00000541576 HSFX1Q9UBD0 423 aa9□□□□□ -0.97
THBS3-210ENST00000541576 COL4A4P53420 1690 aaPredicted RBP9□□□□□ -0.97
THBS3-210ENST00000541576 GAS8O95995 478 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 ADRA1BP35368 520 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 ARL4AP40617 200 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 CXCR3P49682 368 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 OTUD4Q01804 1114 aaKnown RBP8.99□□□□□ -0.97
THBS3-210ENST00000541576 TAF10Q12962 218 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 CUL1Q13616 776 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 RAB33AQ14088 237 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 HLTFQ14527 1009 aaKnown RBP eCLIP8.99□□□□□ -0.97
THBS3-210ENST00000541576 TRIP13Q15645 432 aaPredicted RBP8.99□□□□□ -0.97
THBS3-210ENST00000541576 CEP85LQ5SZL2 805 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 SUGP1Q8IWZ8 645 aaKnown RBP8.99□□□□□ -0.97
THBS3-210ENST00000541576 PYROXD2Q8N2H3 581 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 KLHL23Q8NBE8 558 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 PCDH19Q8TAB3 1148 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 RNF34Q969K3 372 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 FAF2Q96CS3 445 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 CEP295NLQ96MC4 621 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 FRMD8P1Q9BZ68 369 aaPredicted RBP8.99□□□□□ -0.97
THBS3-210ENST00000541576 SMOC2Q9H3U7 446 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 WDCPQ9H6R7 721 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 C10orf88Q9H8K7 445 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 CYP4F11Q9HBI6 524 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 ANLNQ9NQW6 1124 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 OSER1Q9NX31 292 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 FBXW11Q9UKB1 542 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 NEU2Q9Y3R4 380 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 PLXNA3P51805 1871 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 LCHNA4D1U4 455 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 SLC38A8A6NNN8 435 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 I6L893 689 aaPredicted RBP8.99□□□□□ -0.97
THBS3-210ENST00000541576 APOL1O14791 398 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 EIF3HO15372 352 aaKnown RBP eCLIP8.99□□□□□ -0.97
THBS3-210ENST00000541576 SEC24AO95486 1093 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 IGLV3-25P01717 112 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 CTSAP10619 480 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 PECAM1P16284 738 aaPredicted RBP8.99□□□□□ -0.97
THBS3-210ENST00000541576 CA8P35219 290 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 RPL21P46778 160 aaKnown RBP8.99□□□□□ -0.97
THBS3-210ENST00000541576 DRG2P55039 364 aaKnown RBP8.99□□□□□ -0.97
THBS3-210ENST00000541576 VCPP55072 806 aaKnown RBP8.99□□□□□ -0.97
THBS3-210ENST00000541576 CREMQ03060 361 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 LMNB2Q03252 620 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 SCAPQ12770 1279 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 PQLC3Q8N755 202 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 TSEN2Q8NCE0 465 aaKnown RBP8.99□□□□□ -0.97
THBS3-210ENST00000541576 ZBP1Q9H171 429 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 TLR8Q9NR97 1041 aaKnown RBP8.99□□□□□ -0.97
THBS3-210ENST00000541576 FAM114A2Q9NRY5 505 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 GRHL1Q9NZI5 618 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 FNIP2Q9P278 1114 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 RCOR3Q9P2K3 495 aaPredicted RBP8.99□□□□□ -0.97
THBS3-210ENST00000541576 NUDT5Q9UKK9 219 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 MAGED2Q9UNF1 606 aaPredicted RBP8.99□□□□□ -0.97
THBS3-210ENST00000541576 ZNF148Q9UQR1 794 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 SSX2IPQ9Y2D8 614 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 GREB1Q4ZG55 1949 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 TEX28O15482 410 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 IRAK2O43187 625 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 GBP2P32456 591 aaPredicted RBP8.99□□□□□ -0.97
THBS3-210ENST00000541576 NNTQ13423 1086 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 SLC9A4Q6AI14 798 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 NPNTQ6UXI9 565 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 SYDE1Q6ZW31 735 aaPredicted RBP8.99□□□□□ -0.97
THBS3-210ENST00000541576 GSTA5Q7RTV2 222 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 GLIS1Q8NBF1 620 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 SLC35B2Q8TB61 432 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 P3H4Q92791 437 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 CASP10Q92851 521 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 NKD2Q969F2 451 aaPredicted RBP8.99□□□□□ -0.97
THBS3-210ENST00000541576 CSPG4P5Q96PW8 444 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 PLCD4Q9BRC7 762 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 TKTL2Q9H0I9 626 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 DONSONQ9NYP3 566 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms