RNA–Protein interactions for RNA: ENST00000541347.5

CX3CR1-205, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene CX3CR1, Length 3,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-205ENST00000541347 KANSL3Q9P2N6 904 aa11.12□□□□□ -0.63
CX3CR1-205ENST00000541347 TEX264Q9Y6I9 313 aa11.12□□□□□ -0.63
CX3CR1-205ENST00000541347 DCLK1O15075 740 aa11.12□□□□□ -0.63
CX3CR1-205ENST00000541347 F9P00740 461 aa11.12□□□□□ -0.63
CX3CR1-205ENST00000541347 APRTP07741 180 aa11.12□□□□□ -0.63
CX3CR1-205ENST00000541347 BRAFP15056 766 aa11.12□□□□□ -0.63
CX3CR1-205ENST00000541347 CBLBQ13191 982 aa11.12□□□□□ -0.63
CX3CR1-205ENST00000541347 SEMA3BQ13214 749 aa11.12□□□□□ -0.63
CX3CR1-205ENST00000541347 EFTUD2Q15029 972 aaKnown RBP eCLIP11.12□□□□□ -0.63
CX3CR1-205ENST00000541347 PAFAH1B3Q15102 231 aaKnown RBP11.12□□□□□ -0.63
CX3CR1-205ENST00000541347 FBF1Q8TES7 1133 aa11.12□□□□□ -0.63
CX3CR1-205ENST00000541347 SH3TC2Q8TF17 1288 aa11.12□□□□□ -0.63
CX3CR1-205ENST00000541347 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.12□□□□□ -0.63
CX3CR1-205ENST00000541347 PPCSQ9HAB8 311 aa11.12□□□□□ -0.63
CX3CR1-205ENST00000541347 TMEM161AQ9NX61 479 aa11.12□□□□□ -0.63
CX3CR1-205ENST00000541347 SLC24A2Q9UI40 661 aa11.12□□□□□ -0.63
CX3CR1-205ENST00000541347 ACTL7BQ9Y614 415 aa11.12□□□□□ -0.63
CX3CR1-205ENST00000541347 COL4A4P53420 1690 aaPredicted RBP11.12□□□□□ -0.63
CX3CR1-205ENST00000541347 SF3B1O75533 1304 aaKnown RBP eCLIP11.12□□□□□ -0.63
CX3CR1-205ENST00000541347 RASA4BC9J798 803 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 RASA4O43374 803 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 TSHRP16473 764 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 CXCR3P49682 368 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 GEMIN4P57678 1058 aaKnown RBP11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 MPP2Q14168 576 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 PRKD1Q15139 912 aaPredicted RBP11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 C4orf50Q6ZRC1 276 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 TAC4Q86UU9 113 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 FAM126BQ8IXS8 530 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 VPS52Q8N1B4 723 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 MRRFQ96E11 262 aaKnown RBP11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 FRMD8Q9BZ67 464 aaPredicted RBP11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 ACSS3Q9H6R3 686 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 WDCPQ9H6R7 721 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 KCNK9Q9NPC2 374 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 PRG3Q9Y2Y8 225 aaPredicted RBP11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 EBAG9O00559 213 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 OAZ2O95190 189 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 GRIK1P39086 918 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 SLC5A3P53794 718 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 PRMT2P55345 433 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 ARHGEF6Q15052 776 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 RASA2Q15283 850 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 ARL13BQ3SXY8 428 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 TRABD2AQ86V40 505 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 CAND1Q86VP6 1230 aaKnown RBP11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 CHMP6Q96FZ7 201 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 FAM193BQ96PV7 902 aaPredicted RBP11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 TKTL2Q9H0I9 626 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 CCDC134Q9H6E4 229 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 FETUBQ9UGM5 382 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 NLRC5Q86WI3 1866 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 ENPP3O14638 875 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 TNFRSF10BO14763 440 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 PIAS1O75925 651 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 ERCC2P18074 760 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 AP1B1Q10567 949 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 NR1H3Q13133 447 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 LRRC14Q15048 493 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 PKN2Q16513 984 aaKnown RBP11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 QPCTQ16769 361 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 SLC39A12Q504Y0 691 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 ARHGEF18Q6ZSZ5 1173 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 MCUQ8NE86 351 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 DBF4BQ8NFT6 615 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 MGARPQ8TDB4 240 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 ZNF317Q96PQ6 595 aaPredicted RBP11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 ZCWPW1Q9H0M4 648 aa11.11□□□□□ -0.63
CX3CR1-205ENST00000541347 COL6A1P12109 1028 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 ATP2A2P16615 1042 aaKnown RBP11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 IFNAR2P48551 515 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 HCAR3P49019 387 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 GLUD2P49448 558 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 TPI1P60174 286 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 IFRD2Q12894 506 aaPredicted RBP11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 PDK1Q15118 436 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 KLHL38Q2WGJ6 581 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 ANKRD20A2Q5SQ80 823 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 ANKRD20A1Q5TYW2 823 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 ANKRD20A3Q5VUR7 823 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 TP53INP2Q8IXH6 220 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 ANKRD42Q8N9B4 389 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 DQX1Q8TE96 717 aaKnown RBP11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 P2RY11Q96G91 374 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 DHRS4Q9BTZ2 278 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 PSMC3IPQ9P2W1 217 aaPredicted RBP11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 SNX10Q9Y5X0 201 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 A0A0A0MRY4 1105 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 DNM1LO00429 736 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 TADA2AO75478 443 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 TPSB2P20231 275 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 DRD4P21917 467 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 YWHAGP61981 247 aaKnown RBP eCLIP11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 HTRA3P83110 453 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 BFSP2Q13515 415 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 SEMA5AQ13591 1074 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 TPSAB1Q15661 275 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 PLEKHG4Q58EX7 1191 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 DENND5BQ6ZUT9 1274 aa11.1□□□□□ -0.63
CX3CR1-205ENST00000541347 ZNF534Q76KX8 674 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms