RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 AZIN2Q96A70 460 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 C18orf8Q96DM3 657 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 ADAM33Q9BZ11 813 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 SYNCQ9H7C4 482 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 ZDHHC4Q9NPG8 344 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 XPO7Q9UIA9 1087 aaKnown RBP17.57■□□□□ 0.4
CD9-209ENST00000540891 VPS13AQ96RL7 3174 aa17.56■□□□□ 0.4
CD9-209ENST00000540891 ACSL4O60488 711 aa17.56■□□□□ 0.4
CD9-209ENST00000540891 TSPAN3O60637 253 aa17.56■□□□□ 0.4
CD9-209ENST00000540891 UNGP13051 313 aaPredicted RBP17.56■□□□□ 0.4
CD9-209ENST00000540891 HNRNPLP14866 589 aaKnown RBP eCLIP17.56■□□□□ 0.4
CD9-209ENST00000540891 HOXD9P28356 352 aaPredicted RBP17.56■□□□□ 0.4
CD9-209ENST00000540891 TIE1P35590 1138 aa17.56■□□□□ 0.4
CD9-209ENST00000540891 SCNN1AP37088 669 aa17.56■□□□□ 0.4
CD9-209ENST00000540891 FNTBP49356 437 aa17.56■□□□□ 0.4
CD9-209ENST00000540891 MRE11P49959 708 aa17.56■□□□□ 0.4
CD9-209ENST00000540891 DMC1Q14565 340 aa17.56■□□□□ 0.4
CD9-209ENST00000540891 RFWD3Q6PCD5 774 aa17.56■□□□□ 0.4
CD9-209ENST00000540891 ZC3H14Q6PJT7 736 aaKnown RBP17.56■□□□□ 0.4
CD9-209ENST00000540891 ASCL5Q7RTU5 278 aa17.56■□□□□ 0.4
CD9-209ENST00000540891 CCDC33Q8N5R6 958 aa17.56■□□□□ 0.4
CD9-209ENST00000540891 ALLCQ8N6M5 410 aa17.56■□□□□ 0.4
CD9-209ENST00000540891 CCDC26Q8TAB7 109 aa17.56■□□□□ 0.4
CD9-209ENST00000540891 OLIG1Q8TAK6 271 aa17.56■□□□□ 0.4
CD9-209ENST00000540891 DDI1Q8WTU0 396 aa17.56■□□□□ 0.4
CD9-209ENST00000540891 ACDQ96AP0 544 aa17.56■□□□□ 0.4
CD9-209ENST00000540891 MYEOVQ96EZ4 313 aa17.56■□□□□ 0.4
CD9-209ENST00000540891 TTYH3Q9C0H2 523 aa17.56■□□□□ 0.4
CD9-209ENST00000540891 CALCOCO1Q9P1Z2 691 aa17.56■□□□□ 0.4
CD9-209ENST00000540891 SLC27A6Q9Y2P4 619 aa17.56■□□□□ 0.4
CD9-209ENST00000540891 STARD13Q9Y3M8 1113 aa17.56■□□□□ 0.4
CD9-209ENST00000540891 PRR23AA6NEV1 266 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 SGK1O00141 431 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 CYBBP04839 570 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 MMP8P22894 467 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 PBX1P40424 430 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 PXNP49023 591 aaPredicted RBP17.55■□□□□ 0.4
CD9-209ENST00000540891 SLC11A2P49281 568 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 NRLP54845 237 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 ZNF445P59923 1031 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 TPM4P67936 248 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 CDK17Q00537 523 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 PTP4A2Q12974 167 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 GEN1Q17RS7 908 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 PREPLQ4J6C6 727 aaPredicted RBP17.55■□□□□ 0.4
CD9-209ENST00000540891 MPPE1Q53F39 396 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 ZC3H12AQ5D1E8 599 aaKnown RBP17.55■□□□□ 0.4
CD9-209ENST00000540891 PIK3R6Q5UE93 754 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 RNF43Q68DV7 783 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 HEATR6Q6AI08 1181 aaKnown RBP17.55■□□□□ 0.4
CD9-209ENST00000540891 TRNP1Q6NT89 227 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 TRIM72Q6ZMU5 477 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 IRF2BP2Q7Z5L9 587 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 TXNDC5Q8NBS9 432 aaKnown RBP17.55■□□□□ 0.4
CD9-209ENST00000540891 ATRIPQ8WXE1 791 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 NKD2Q969F2 451 aaPredicted RBP17.55■□□□□ 0.4
CD9-209ENST00000540891 PRICKLE1Q96MT3 831 aaPredicted RBP17.55■□□□□ 0.4
CD9-209ENST00000540891 HHIPQ96QV1 700 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 NPY6RQ99463 290 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 SYT11Q9BT88 431 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 MMP17Q9ULZ9 603 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 MYO6Q9UM54 1294 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 SLC8A2Q9UPR5 921 aa17.55■□□□□ 0.4
CD9-209ENST00000540891 LRRC53A6NM62 1247 aa17.54■□□□□ 0.4
CD9-209ENST00000540891 KCNU1A8MYU2 1149 aa17.54■□□□□ 0.4
CD9-209ENST00000540891 GOLGA6L19H0YKK7 550 aa17.54■□□□□ 0.4
CD9-209ENST00000540891 ADAM23O75077 832 aa17.54■□□□□ 0.4
CD9-209ENST00000540891 KLF8O95600 359 aaPredicted RBP17.54■□□□□ 0.4
CD9-209ENST00000540891 MOCS2O96007 188 aaPredicted RBP17.54■□□□□ 0.4
CD9-209ENST00000540891 FERP16591 822 aa17.54■□□□□ 0.4
CD9-209ENST00000540891 TFE3P19532 575 aaPredicted RBP17.54■□□□□ 0.4
CD9-209ENST00000540891 NOS2P35228 1153 aa17.54■□□□□ 0.4
CD9-209ENST00000540891 MATKP42679 507 aa17.54■□□□□ 0.4
CD9-209ENST00000540891 FAM102AQ5T9C2 384 aaPredicted RBP17.54■□□□□ 0.4
CD9-209ENST00000540891 EGFLAMQ63HQ2 1017 aa17.54■□□□□ 0.4
CD9-209ENST00000540891 E4F1Q66K89 784 aaPredicted RBP17.54■□□□□ 0.4
CD9-209ENST00000540891 TMEM92Q6UXU6 159 aa17.54■□□□□ 0.4
CD9-209ENST00000540891 MMS22LQ6ZRQ5 1243 aa17.54■□□□□ 0.4
CD9-209ENST00000540891 LONP2Q86WA8 852 aa17.54■□□□□ 0.4
CD9-209ENST00000540891 CAMKK1Q8N5S9 505 aa17.54■□□□□ 0.4
CD9-209ENST00000540891 SLC30A5Q8TAD4 765 aa17.54■□□□□ 0.4
CD9-209ENST00000540891 TMA16Q96EY4 203 aaKnown RBP17.54■□□□□ 0.4
CD9-209ENST00000540891 AGPAT1Q99943 283 aa17.54■□□□□ 0.4
CD9-209ENST00000540891 NUCKS1Q9H1E3 243 aaKnown RBP17.54■□□□□ 0.4
CD9-209ENST00000540891 SEMA4AQ9H3S1 761 aa17.54■□□□□ 0.4
CD9-209ENST00000540891 FAM204AQ9H8W3 233 aa17.54■□□□□ 0.4
CD9-209ENST00000540891 DDIT4Q9NX09 232 aa17.54■□□□□ 0.4
CD9-209ENST00000540891 TMEM59LQ9UK28 342 aa17.54■□□□□ 0.4
CD9-209ENST00000540891 USP34Q70CQ2 3546 aa17.54■□□□□ 0.4
CD9-209ENST00000540891 SYNJ2BP-COX16A0A087WUM0 186 aa17.53■□□□□ 0.4
CD9-209ENST00000540891 GOLGA8SH3BPF8 625 aa17.53■□□□□ 0.4
CD9-209ENST00000540891 HRO43593 1189 aa17.53■□□□□ 0.4
CD9-209ENST00000540891 APOEP02649 317 aa17.53■□□□□ 0.4
CD9-209ENST00000540891 FLT3P36888 993 aa17.53■□□□□ 0.4
CD9-209ENST00000540891 UBASH3AP57075 661 aa17.53■□□□□ 0.4
CD9-209ENST00000540891 RNASE9P60153 205 aaKnown RBP17.53■□□□□ 0.4
CD9-209ENST00000540891 CENPCQ03188 943 aa17.53■□□□□ 0.4
CD9-209ENST00000540891 SRSF5Q13243 272 aaKnown RBP17.53■□□□□ 0.4
CD9-209ENST00000540891 CRY1Q16526 586 aa17.53■□□□□ 0.4
CD9-209ENST00000540891 CLEC16AQ2KHT3 1053 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms