RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 DSPP15924 2871 aaKnown RBP14.77□□□□□ -0.05
SNHG1-213ENST00000540725 TRIM49BA6NDI0 452 aa14.76□□□□□ -0.05
SNHG1-213ENST00000540725 SYNCRIPO60506 623 aaKnown RBP14.76□□□□□ -0.05
SNHG1-213ENST00000540725 SMC2O95347 1197 aa14.76□□□□□ -0.05
SNHG1-213ENST00000540725 MAOBP27338 520 aa14.76□□□□□ -0.05
SNHG1-213ENST00000540725 HARS2P49590 506 aaKnown RBP14.76□□□□□ -0.05
SNHG1-213ENST00000540725 SIM1P81133 766 aaPredicted RBP14.76□□□□□ -0.05
SNHG1-213ENST00000540725 LRRC63Q05C16 580 aa14.76□□□□□ -0.05
SNHG1-213ENST00000540725 LRMPQ12912 555 aa14.76□□□□□ -0.05
SNHG1-213ENST00000540725 MPPE1Q53F39 396 aa14.76□□□□□ -0.05
SNHG1-213ENST00000540725 TMPRSS6Q8IU80 811 aa14.76□□□□□ -0.05
SNHG1-213ENST00000540725 SIX6OS1Q8N1H7 587 aa14.76□□□□□ -0.05
SNHG1-213ENST00000540725 UBR7Q8N806 425 aa14.76□□□□□ -0.05
SNHG1-213ENST00000540725 RBBP8NLQ8NC74 664 aaPredicted RBP14.76□□□□□ -0.05
SNHG1-213ENST00000540725 UBA3Q8TBC4 463 aa14.76□□□□□ -0.05
SNHG1-213ENST00000540725 RNF139Q8WU17 664 aa14.76□□□□□ -0.05
SNHG1-213ENST00000540725 SORCS1Q8WY21 1168 aa14.76□□□□□ -0.05
SNHG1-213ENST00000540725 EDEM1Q92611 657 aa14.76□□□□□ -0.05
SNHG1-213ENST00000540725 SLC35C1Q96A29 364 aa14.76□□□□□ -0.05
SNHG1-213ENST00000540725 SIPA1Q96FS4 1042 aa14.76□□□□□ -0.05
SNHG1-213ENST00000540725 TMEM121BQ9BXQ6 578 aaPredicted RBP14.76□□□□□ -0.05
SNHG1-213ENST00000540725 ITM2CQ9NQX7 267 aa14.76□□□□□ -0.05
SNHG1-213ENST00000540725 DNAAF2Q9NVR5 837 aaKnown RBP14.76□□□□□ -0.05
SNHG1-213ENST00000540725 SFMBT1Q9UHJ3 866 aa14.76□□□□□ -0.05
SNHG1-213ENST00000540725 HBS1LQ9Y450 684 aaKnown RBP14.76□□□□□ -0.05
SNHG1-213ENST00000540725 GOLGA6L4A6NEF3 574 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 YJEFN3A6XGL0 299 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 MEI4A8MW99 385 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 KCNJ18B7U540 433 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 E7ENQ6 273 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 O00370 1275 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 HYAL3O43820 417 aaPredicted RBP14.75□□□□□ -0.05
SNHG1-213ENST00000540725 TSPAN3O60637 253 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 SETSIPP0DME0 302 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 VDRP11473 427 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 NCAM1P13591 858 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 CD59P13987 128 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 GNSP15586 552 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 TBXAS1P24557 533 aaPredicted RBP14.75□□□□□ -0.05
SNHG1-213ENST00000540725 PRKCHP24723 683 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 HOXD9P28356 352 aaPredicted RBP14.75□□□□□ -0.05
SNHG1-213ENST00000540725 TPMTP51580 245 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 BSPRYQ5W0U4 402 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 TMEM215Q68D42 235 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 SERPINA13PQ6UXR4 307 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 CACUL1Q86Y37 369 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 SPATA20Q8TB22 786 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 PRCCQ92733 491 aaPredicted RBP14.75□□□□□ -0.05
SNHG1-213ENST00000540725 ERCC4Q92889 916 aaPredicted RBP14.75□□□□□ -0.05
SNHG1-213ENST00000540725 GATA6Q92908 595 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 SMARCE1Q969G3 411 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 GPR174Q9BXC1 333 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 DMXL2Q8TDJ6 3036 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 ACACAQ13085 2346 aa14.75□□□□□ -0.05
SNHG1-213ENST00000540725 TIMM44O43615 452 aa14.74□□□□□ -0.05
SNHG1-213ENST00000540725 GJB3O75712 270 aa14.74□□□□□ -0.05
SNHG1-213ENST00000540725 EPHX1P07099 455 aa14.74□□□□□ -0.05
SNHG1-213ENST00000540725 COPAP53621 1224 aa14.74□□□□□ -0.05
SNHG1-213ENST00000540725 FAM193AP78312 1265 aa14.74□□□□□ -0.05
SNHG1-213ENST00000540725 ARID5AQ03989 594 aa14.74□□□□□ -0.05
SNHG1-213ENST00000540725 PKDCCQ504Y2 493 aa14.74□□□□□ -0.05
SNHG1-213ENST00000540725 SCML4Q8N228 414 aa14.74□□□□□ -0.05
SNHG1-213ENST00000540725 KDF1Q8NAX2 398 aaPredicted RBP14.74□□□□□ -0.05
SNHG1-213ENST00000540725 ENGASEQ8NFI3 743 aa14.74□□□□□ -0.05
SNHG1-213ENST00000540725 CADM4Q8NFZ8 388 aa14.74□□□□□ -0.05
SNHG1-213ENST00000540725 KCTD13Q8WZ19 329 aa14.74□□□□□ -0.05
SNHG1-213ENST00000540725 DNASE2BQ8WZ79 361 aa14.74□□□□□ -0.05
SNHG1-213ENST00000540725 GTPBP4Q9BZE4 634 aaKnown RBP14.74□□□□□ -0.05
SNHG1-213ENST00000540725 CNGB3Q9NQW8 809 aa14.74□□□□□ -0.05
SNHG1-213ENST00000540725 ABCC13Q9NSE7 274 aa14.74□□□□□ -0.05
SNHG1-213ENST00000540725 STOML2Q9UJZ1 356 aa14.74□□□□□ -0.05
SNHG1-213ENST00000540725 KIAA1257Q9ULG3 409 aa14.74□□□□□ -0.05
SNHG1-213ENST00000540725 ZMIZ1Q9ULJ6 1067 aa14.74□□□□□ -0.05
SNHG1-213ENST00000540725 NFE2L3Q9Y4A8 694 aa14.74□□□□□ -0.05
SNHG1-213ENST00000540725 NEUROG3Q9Y4Z2 214 aa14.74□□□□□ -0.05
SNHG1-213ENST00000540725 TMEM131Q92545 1883 aa14.74□□□□□ -0.05
SNHG1-213ENST00000540725 GOLGA4Q13439 2230 aaKnown RBP14.74□□□□□ -0.05
SNHG1-213ENST00000540725 TP53BP1Q12888 1972 aaPredicted RBP14.74□□□□□ -0.05
SNHG1-213ENST00000540725 A0A1B0GTW7 788 aa14.73□□□□□ -0.05
SNHG1-213ENST00000540725 TMEM8BA6NDV4 472 aa14.73□□□□□ -0.05
SNHG1-213ENST00000540725 MSI1O43347 362 aaKnown RBP14.73□□□□□ -0.05
SNHG1-213ENST00000540725 LATS1O95835 1130 aa14.73□□□□□ -0.05
SNHG1-213ENST00000540725 IGLV3-19P01714 112 aa14.73□□□□□ -0.05
SNHG1-213ENST00000540725 PAEPP09466 180 aa14.73□□□□□ -0.05
SNHG1-213ENST00000540725 ACADMP11310 421 aa14.73□□□□□ -0.05
SNHG1-213ENST00000540725 HLA-EP13747 358 aa14.73□□□□□ -0.05
SNHG1-213ENST00000540725 LCP1P13796 627 aa14.73□□□□□ -0.05
SNHG1-213ENST00000540725 HLA-FP30511 346 aa14.73□□□□□ -0.05
SNHG1-213ENST00000540725 OXTRP30559 389 aa14.73□□□□□ -0.05
SNHG1-213ENST00000540725 FMO5P49326 533 aa14.73□□□□□ -0.05
SNHG1-213ENST00000540725 RGS7P49802 495 aa14.73□□□□□ -0.05
SNHG1-213ENST00000540725 DAOAP59103 153 aa14.73□□□□□ -0.05
SNHG1-213ENST00000540725 ZNF445P59923 1031 aa14.73□□□□□ -0.05
SNHG1-213ENST00000540725 GRIK2Q13002 908 aa14.73□□□□□ -0.05
SNHG1-213ENST00000540725 SLC14A1Q13336 389 aa14.73□□□□□ -0.05
SNHG1-213ENST00000540725 ADGRF1Q5T601 910 aa14.73□□□□□ -0.05
SNHG1-213ENST00000540725 TMEM270Q6UE05 265 aa14.73□□□□□ -0.05
SNHG1-213ENST00000540725 LCLAT1Q6UWP7 414 aa14.73□□□□□ -0.05
SNHG1-213ENST00000540725 ZCCHC9Q8N567 271 aaKnown RBP14.73□□□□□ -0.05
SNHG1-213ENST00000540725 WFIKKN2Q8TEU8 576 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms