RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 PFKLP17858 780 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 HDCP19113 662 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 CD6P30203 668 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 PNPLA4P41247 253 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 STX17P56962 302 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 MYL6P60660 151 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 VAC14Q08AM6 782 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 MESP2Q0VG99 397 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 SOWAHAQ2M3V2 549 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 ZACNQ401N2 412 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 SV2CQ496J9 727 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 SDE2Q6IQ49 451 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 KLHL10Q6JEL2 608 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 ATG14Q6ZNE5 492 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 SV2AQ7L0J3 742 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 LRRTM3Q86VH5 581 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 FAM186BQ8IYM0 893 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 THEM5Q8N1Q8 247 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 ARL14EPQ8N8R7 260 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 OR10T2Q8NGX3 314 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 NELFBQ8WX92 580 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 HPDLQ96IR7 371 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 TRIM4Q9C037 500 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 XYLT2Q9H1B5 865 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 MIR1-1HGQ9H1L0 117 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 NUP62CLQ9H1M0 184 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 CPNE5Q9HCH3 593 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 ZDHHC4Q9NPG8 344 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 GCNT4Q9P109 453 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 SEPT3Q9UH03 358 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 DSEQ9UL01 958 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 L1RE1Q9UN81 338 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 STARD13Q9Y3M8 1113 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 SNX9Q9Y5X1 595 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 KNL1Q8NG31 2342 aa9.36□□□□□ -0.91
TRAPPC1-202ENST00000540486 GABRDO14764 452 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 PSMA7O14818 248 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 PAPSS1O43252 624 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 HCRTO43612 131 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 TADA3O75528 432 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 RFPL3O75679 317 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 STAU1O95793 577 aaKnown RBP9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 ADH1CP00326 375 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 TRIM49P0CI25 452 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 TRIM49CP0CI26 452 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 NCAM1P13591 858 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 PPP1R2P41236 205 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 GCLMP48507 274 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 AP3M2P53677 418 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 PCBP4P57723 403 aaKnown RBP9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 LRRC63Q05C16 580 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 ENPEPQ07075 957 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 STIM1Q13586 685 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 RHBDF2Q6PJF5 856 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 FOXR2Q6PJQ5 311 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 XKR5Q6UX68 686 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 RBM43Q6ZSC3 357 aaKnown RBP9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 INTS8Q75QN2 995 aaKnown RBP9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 FILIP1Q7Z7B0 1213 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 OSTM1Q86WC4 334 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 DCP1BQ8IZD4 617 aaKnown RBP9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 PDCL2Q8N4E4 241 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 PRR7Q8TB68 274 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 IPO4Q8TEX9 1081 aaKnown RBP9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 ZNF578Q96N58 590 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 TSG101Q99816 390 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 CD248Q9HCU0 757 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 PRDM9Q9NQV7 894 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 WSB2Q9NYS7 404 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 NME7Q9Y5B8 376 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 PCDHB5Q9Y5E4 795 aa9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 ZNF638Q14966 1978 aaKnown RBP9.35□□□□□ -0.91
TRAPPC1-202ENST00000540486 LRRK2Q5S007 2527 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 A0A1B0GVT2 93 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 E2F8A0AVK6 867 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 METTL12A8MUP2 240 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 GOLGA6L22H0YM25 854 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 ENC1O14682 589 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 DFNA5O60443 496 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 PHACTR2O75167 634 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 NOL4O94818 638 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 JUNDP17535 347 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 LMO2P25791 158 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 CCT8P50990 548 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 AFF3P51826 1226 aaKnown RBP9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 CDR1P51861 262 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 RPL10AP62906 217 aaKnown RBP9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 NFATC3Q12968 1075 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 NCOA4Q13772 614 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 WDR72Q3MJ13 1102 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 HES3Q5TGS1 186 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 DCAF12L1Q5VU92 463 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 FBXL19Q6PCT2 694 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 DPH6Q7L8W6 267 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 METTL23Q86XA0 190 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 PHTF2Q8N3S3 785 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 TOP6BLQ8N6T0 577 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 C1orf216Q8TAB5 229 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 TAS1R2Q8TE23 839 aa9.34□□□□□ -0.91
TRAPPC1-202ENST00000540486 KBTBD7Q8WVZ9 684 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms