RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 ACSF2Q96CM8 615 aaPredicted RBP19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 ZSWIM3Q96MP5 696 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 NAPGQ99747 312 aaPredicted RBP19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 SNRNP25Q9BV90 132 aaKnown RBP19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 TKTL2Q9H0I9 626 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 POMKQ9H5K3 350 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 SLITRK6Q9H5Y7 841 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 GPATCH2LQ9NWQ4 482 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 PRKAG3Q9UGI9 489 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 CPQQ9Y646 472 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 TRIOO75962 3097 aa19.64■□□□□ 0.73
TNFRSF1A-213ENST00000540022 CCDC66A2RUB6 948 aa19.64■□□□□ 0.73
TNFRSF1A-213ENST00000540022 PSTPIP1O43586 416 aa19.64■□□□□ 0.73
TNFRSF1A-213ENST00000540022 ADRA1BP35368 520 aa19.64■□□□□ 0.73
TNFRSF1A-213ENST00000540022 KPNA1P52294 538 aaPredicted RBP19.64■□□□□ 0.73
TNFRSF1A-213ENST00000540022 COG7P83436 770 aa19.64■□□□□ 0.73
TNFRSF1A-213ENST00000540022 RING1Q06587 406 aa19.64■□□□□ 0.73
TNFRSF1A-213ENST00000540022 PPP2R5DQ14738 602 aa19.64■□□□□ 0.73
TNFRSF1A-213ENST00000540022 BOLA3Q53S33 107 aa19.64■□□□□ 0.73
TNFRSF1A-213ENST00000540022 BRMS1LQ5PSV4 323 aa19.64■□□□□ 0.73
TNFRSF1A-213ENST00000540022 POLNQ7Z5Q5 900 aa19.64■□□□□ 0.73
TNFRSF1A-213ENST00000540022 UBE2Q2Q8WVN8 375 aa19.64■□□□□ 0.73
TNFRSF1A-213ENST00000540022 WBP2Q969T9 261 aa19.64■□□□□ 0.73
TNFRSF1A-213ENST00000540022 NTAN1Q96AB6 310 aa19.64■□□□□ 0.73
TNFRSF1A-213ENST00000540022 MAGEB5Q9BZ81 275 aa19.64■□□□□ 0.73
TNFRSF1A-213ENST00000540022 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.64■□□□□ 0.73
TNFRSF1A-213ENST00000540022 ARHGEF38Q9NXL2 777 aa19.64■□□□□ 0.73
TNFRSF1A-213ENST00000540022 FZD10Q9ULW2 581 aa19.64■□□□□ 0.73
TNFRSF1A-213ENST00000540022 KCNU1A8MYU2 1149 aa19.63■□□□□ 0.73
TNFRSF1A-213ENST00000540022 KIF2AO00139 706 aaPredicted RBP19.63■□□□□ 0.73
TNFRSF1A-213ENST00000540022 KRT7P08729 469 aa19.63■□□□□ 0.73
TNFRSF1A-213ENST00000540022 CASQ1P31415 396 aa19.63■□□□□ 0.73
TNFRSF1A-213ENST00000540022 AVPR1AP37288 418 aa19.63■□□□□ 0.73
TNFRSF1A-213ENST00000540022 CA9Q16790 459 aa19.63■□□□□ 0.73
TNFRSF1A-213ENST00000540022 ERMARDQ5T6L9 678 aa19.63■□□□□ 0.73
TNFRSF1A-213ENST00000540022 GET4Q7L5D6 327 aaPredicted RBP19.63■□□□□ 0.73
TNFRSF1A-213ENST00000540022 ADHFE1Q8IWW8 467 aa19.63■□□□□ 0.73
TNFRSF1A-213ENST00000540022 NPAS3Q8IXF0 933 aa19.63■□□□□ 0.73
TNFRSF1A-213ENST00000540022 HSPH1Q92598 858 aa19.63■□□□□ 0.73
TNFRSF1A-213ENST00000540022 RIPOR3Q96MK2 946 aa19.63■□□□□ 0.73
TNFRSF1A-213ENST00000540022 PSMB7Q99436 277 aa19.63■□□□□ 0.73
TNFRSF1A-213ENST00000540022 SMG9Q9H0W8 520 aaKnown RBP19.63■□□□□ 0.73
TNFRSF1A-213ENST00000540022 KLHL11Q9NVR0 708 aa19.63■□□□□ 0.73
TNFRSF1A-213ENST00000540022 TMEM51Q9NW97 253 aa19.63■□□□□ 0.73
TNFRSF1A-213ENST00000540022 C2orf16Q68DN1 1984 aa19.62■□□□□ 0.73
TNFRSF1A-213ENST00000540022 NOTCH4Q99466 2003 aa19.62■□□□□ 0.73
TNFRSF1A-213ENST00000540022 CTAGE9A4FU28 777 aa19.62■□□□□ 0.73
TNFRSF1A-213ENST00000540022 C19orf67A6NJJ6 358 aa19.62■□□□□ 0.73
TNFRSF1A-213ENST00000540022 STC2O76061 302 aa19.62■□□□□ 0.73
TNFRSF1A-213ENST00000540022 MOCS2O96007 188 aaPredicted RBP19.62■□□□□ 0.73
TNFRSF1A-213ENST00000540022 TUBB4AP04350 444 aa19.62■□□□□ 0.73
TNFRSF1A-213ENST00000540022 IRF1P10914 325 aa19.62■□□□□ 0.73
TNFRSF1A-213ENST00000540022 SLC2A3P11169 496 aa19.62■□□□□ 0.73
TNFRSF1A-213ENST00000540022 UBL4BQ8N7F7 174 aa19.62■□□□□ 0.73
TNFRSF1A-213ENST00000540022 TEKT4Q8WW24 435 aa19.62■□□□□ 0.73
TNFRSF1A-213ENST00000540022 FGF13Q92913 245 aa19.62■□□□□ 0.73
TNFRSF1A-213ENST00000540022 XPO7Q9UIA9 1087 aaKnown RBP19.62■□□□□ 0.73
TNFRSF1A-213ENST00000540022 ZMYM5Q9UJ78 669 aa19.62■□□□□ 0.73
TNFRSF1A-213ENST00000540022 ARHGAP26Q9UNA1 814 aa19.62■□□□□ 0.73
TNFRSF1A-213ENST00000540022 AP4E1Q9UPM8 1137 aa19.62■□□□□ 0.73
TNFRSF1A-213ENST00000540022 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.62■□□□□ 0.73
TNFRSF1A-213ENST00000540022 MYO10Q9HD67 2058 aa19.62■□□□□ 0.73
TNFRSF1A-213ENST00000540022 PRAMEF12O95522 483 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 APOEP02649 317 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 MTHFRP42898 656 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 AIF1P55008 147 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 SCAPQ12770 1279 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 ARL13BQ3SXY8 428 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 DCAF12L1Q5VU92 463 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 PAPD7Q5XG87 772 aaKnown RBP19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 KATNAL2Q8IYT4 538 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 PYROXD2Q8N2H3 581 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 RAPGEF5Q92565 580 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 ZNF592Q92610 1267 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 USP13Q92995 863 aaPredicted RBP19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 PLD4Q96BZ4 506 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 CCL26Q9Y258 94 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 PI4K2BG5E9Z4 385 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 PAGE1O75459 146 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 KLKB1P03952 638 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 SP100P23497 879 aaPredicted RBP19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 RWDD2BP57060 319 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 ZFYVE27Q5T4F4 411 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 NUGGCQ68CJ6 796 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 ARID3BQ8IVW6 561 aaPredicted RBP19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 UNC45BQ8IWX7 931 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 ZSCAN18Q8TBC5 510 aaPredicted RBP19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 DHX35Q9H5Z1 703 aaKnown RBP19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 EPHX3Q9H6B9 360 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 TDP1Q9NUW8 608 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 DDX56Q9NY93 547 aaKnown RBP19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 SNX12Q9UMY4 172 aa19.61■□□□□ 0.73
TNFRSF1A-213ENST00000540022 DOCK6Q96HP0 2047 aa19.6■□□□□ 0.73
TNFRSF1A-213ENST00000540022 OBSL1O75147 1896 aa19.6■□□□□ 0.73
TNFRSF1A-213ENST00000540022 ANAPC1Q9H1A4 1944 aa19.6■□□□□ 0.73
TNFRSF1A-213ENST00000540022 KCNK3O14649 394 aa19.6■□□□□ 0.73
TNFRSF1A-213ENST00000540022 GREM1O60565 184 aa19.6■□□□□ 0.73
TNFRSF1A-213ENST00000540022 KRT1P04264 644 aa19.6■□□□□ 0.73
TNFRSF1A-213ENST00000540022 CORO1AP31146 461 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms