RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 AKIP1Q9NQ31 210 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 MRPL40Q9NQ50 206 aaKnown RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 AAASQ9NRG9 546 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 FAM217BQ9NTX9 383 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 NINJ2Q9NZG7 142 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 PSMC3IPQ9P2W1 217 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 COPG2Q9UBF2 871 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 IPO11Q9UI26 975 aaKnown RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 MOSPD1Q9UJG1 213 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 CPSF3Q9UKF6 684 aaKnown RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 PSME2Q9UL46 239 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 GNEQ9Y223 722 aaKnown RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 POLHQ9Y253 713 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 GDAQ9Y2T3 454 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 RWDD3Q9Y3V2 267 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 TRPM3Q9HCF6 1732 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 PLCH1Q4KWH8 1693 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 MROH5Q6ZUA9 1318 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 ZNF335Q9H4Z2 1342 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-211ENST00000539921 MYH4Q9Y623 1939 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 PRSS51A0A1B0GVH4 220 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 GTPBP10A4D1E9 387 aaKnown RBP6.31□□□□□ -1.4
SNHG1-211ENST00000539921 TRIM49BA6NDI0 452 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 SMCO2A6NFE2 343 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 F8W810 466 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 INO80B-WBP1J3KQ70 363 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 PSMD11O00231 422 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 APOL1O14791 398 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 RIMBP2O15034 1052 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 EPHB6O15197 1021 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 RFPL2O75678 378 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 DDHD2O94830 711 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 HLA-DRAP01903 254 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 SFTPCP11686 197 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 ACTN1P12814 892 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 GABRB3P28472 473 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 RBL1P28749 1068 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 HTR7P34969 479 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 RCVRNP35243 200 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 GRK3P35626 688 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 KRT20P35900 424 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 ZAP70P43403 619 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 GNPDA1P46926 289 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 OR3A3P47888 321 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 HCAR3P49019 387 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 COPAP53621 1224 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 POLR2GP62487 172 aaKnown RBP eCLIP6.31□□□□□ -1.4
SNHG1-211ENST00000539921 TMPRSS15P98073 1019 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 RELQ04864 619 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-211ENST00000539921 ZNF33BQ06732 778 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 FAAP100Q0VG06 881 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 ILF2Q12905 390 aaKnown RBP6.31□□□□□ -1.4
SNHG1-211ENST00000539921 CBLBQ13191 982 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 TFDP1Q14186 410 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 MAPRE1Q15691 268 aaKnown RBP6.31□□□□□ -1.4
SNHG1-211ENST00000539921 STK11Q15831 433 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 DDR2Q16832 855 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 PFKFB3Q16875 520 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-211ENST00000539921 EXOC3L4Q17RC7 722 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 CCDC142Q17RM4 750 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 KCNT1Q5JUK3 1230 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 SEL1L2Q5TEA6 688 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 FAM205BPQ63HN1 556 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 LPCAT4Q643R3 524 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 SULT6B1Q6IMI4 303 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 FAM117BQ6P1L5 589 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 LETMD1Q6P1Q0 360 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 KSR2Q6VAB6 950 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 UNC5AQ6ZN44 842 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 LRRC55Q6ZSA7 311 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 KIAA0408Q6ZU52 694 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 RIC3Q7Z5B4 369 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 TFAP2DQ7Z6R9 452 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 AMIGO2Q86SJ2 522 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 FAM124AQ86V42 546 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 PROSER2Q86WR7 435 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-211ENST00000539921 ANKLE2Q86XL3 938 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 CAMK1DQ8IU85 385 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 SIX6OS1Q8N1H7 587 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 PARP8Q8N3A8 854 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 FIBCD1Q8N539 461 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.31□□□□□ -1.42e-11■■■■■ 65.7
SNHG1-211ENST00000539921 PRELID2Q8N945 189 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 MFSD2AQ8NA29 543 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 MCOLN3Q8TDD5 553 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 BCL7CQ8WUZ0 217 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-211ENST00000539921 JPH3Q8WXH2 748 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-211ENST00000539921 SEPT1Q8WYJ6 367 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 SGK3Q96BR1 496 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 TMEM80Q96HE8 168 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 BTN2A3PQ96KV6 586 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 CDK5RAP1Q96SZ6 601 aaKnown RBP6.31□□□□□ -1.4
SNHG1-211ENST00000539921 IER2Q9BTL4 223 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 THTPAQ9BU02 230 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 MKNK1Q9BUB5 465 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 C1QTNF7Q9BXJ2 289 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 ZNF717Q9BY31 904 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-211ENST00000539921 WNT8AQ9H1J5 351 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 GANQ9H2C0 597 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 C8orf33Q9H7E9 229 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms