RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 ZNF276Q8N554 614 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 MEIOBQ8N635 442 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 RAB3IL1Q8TBN0 382 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 C1orf54Q8WWF1 131 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 DDX1Q92499 740 aaKnown RBP7.95□□□□□ -1.14
CCDC60-204ENST00000539847 SEPT8Q92599 483 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 STMN2Q93045 179 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 NKD2Q969F2 451 aaPredicted RBP7.95□□□□□ -1.14
CCDC60-204ENST00000539847 TOP1MTQ969P6 601 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 ZNF653Q96CK0 615 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 RBM41Q96IZ5 413 aaKnown RBP7.95□□□□□ -1.14
CCDC60-204ENST00000539847 POP1Q99575 1024 aaKnown RBP7.95□□□□□ -1.14
CCDC60-204ENST00000539847 SIKE1Q9BRV8 207 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 CENPKQ9BS16 269 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 LMAN2LQ9H0V9 348 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 NSUN3Q9H649 340 aaKnown RBP7.95□□□□□ -1.14
CCDC60-204ENST00000539847 ZWILCHQ9H900 591 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 EHMT1Q9H9B1 1298 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 MRPL47Q9HD33 250 aaKnown RBP7.95□□□□□ -1.14
CCDC60-204ENST00000539847 CHST7Q9NS84 486 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 PLA2G2EQ9NZK7 142 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 ATXN10Q9UBB4 475 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 KCNG1Q9UIX4 513 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 GMEB1Q9Y692 573 aa7.95□□□□□ -1.14
CCDC60-204ENST00000539847 TRIP12Q14669 1992 aaPredicted RBP7.95□□□□□ -1.14
CCDC60-204ENST00000539847 IGLV3-22A0A075B6J6 115 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 GSTTP1A0A1W2PQM5 241 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 FAM86C2PA6NEL3 165 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 TMEM110-MUSTN1A8MSY1 372 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 FAM86B1E9PN63 330 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 MEIS1O00470 390 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 CAPN9O14815 690 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 ENTPD5O75356 428 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 SPAG6O75602 509 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 STAM2O75886 525 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 FAM86B2P0C5J1 330 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 PABPC4LP0CB38 370 aaKnown RBP7.94□□□□□ -1.14
CCDC60-204ENST00000539847 UNGP13051 313 aaPredicted RBP7.94□□□□□ -1.14
CCDC60-204ENST00000539847 CA4P22748 312 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 ABCD1P33897 745 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 PHKA2P46019 1235 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 MXI1P50539 228 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 ARFIP2P53365 341 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 GEMIN4P57678 1058 aaKnown RBP7.94□□□□□ -1.14
CCDC60-204ENST00000539847 PPARDQ03181 441 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 SLC18A2Q05940 514 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 PPP3CAQ08209 521 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 RCN2Q14257 317 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 SLC1A5Q15758 541 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 USH1GQ495M9 461 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 PABPC1LQ4VXU2 614 aaKnown RBP7.94□□□□□ -1.14
CCDC60-204ENST00000539847 ACSBG2Q5FVE4 666 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 ODR4Q5SWX8 454 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 C1orf220Q5T0J3 134 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 ARHGEF16Q5VV41 709 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 EGFLAMQ63HQ2 1017 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 KRT39Q6A163 491 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 TRIM67Q6ZTA4 783 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 FAM47EQ6ZV65 393 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 MTDHQ86UE4 582 aaKnown RBP7.94□□□□□ -1.14
CCDC60-204ENST00000539847 VSIG10LQ86VR7 867 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 FBXO11Q86XK2 927 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 MYLK4Q86YV6 388 aaPredicted RBP7.94□□□□□ -1.14
CCDC60-204ENST00000539847 ARHGEF19Q8IW93 802 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 DHX37Q8IY37 1157 aaKnown RBP7.94□□□□□ -1.14
CCDC60-204ENST00000539847 SYCP3Q8IZU3 236 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 NME8Q8N427 588 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 DBF4BQ8NFT6 615 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 TTC8Q8TAM2 541 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 CCDC110Q8TBZ0 833 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 MIPOL1Q8TD10 442 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 SKA1Q96BD8 255 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 MFSD14AQ96MC6 490 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 TAAR1Q96RJ0 339 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 RIT2Q99578 217 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 MIPEPQ99797 713 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 PRRX2Q99811 253 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 PAIP2Q9BPZ3 127 aaKnown RBP7.94□□□□□ -1.14
CCDC60-204ENST00000539847 SPATA16Q9BXB7 569 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 MANSC1Q9H8J5 431 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 TMEM8AQ9HCN3 771 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 PXMP2Q9NR77 195 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 KCNK4Q9NYG8 393 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 TAS2R1Q9NYW7 299 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 COL20A1Q9P218 1284 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.94□□□□□ -1.14
CCDC60-204ENST00000539847 EXOC7Q9UPT5 735 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 ZDBF2Q9HCK1 2354 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 COL4A4P53420 1690 aaPredicted RBP7.94□□□□□ -1.14
CCDC60-204ENST00000539847 SIP14410 1827 aa7.94□□□□□ -1.14
CCDC60-204ENST00000539847 MYO7AQ13402 2215 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 C17orf102A2RUQ5 167 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 E7ESA3 106 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 CYP26A1O43174 497 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 PEX1O43933 1283 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 TBX10O75333 385 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 RGS20O76081 388 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 CYP1A1P04798 512 aaPredicted RBP7.93□□□□□ -1.14
CCDC60-204ENST00000539847 RPLP2P05387 115 aaKnown RBP7.93□□□□□ -1.14
CCDC60-204ENST00000539847 ITGAVP06756 1048 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 224.1 ms